miRNEST 2.0, an integrative microRNA resource :: BLAST
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 73.8 bits (37), Expect = 4e-14
Identities = 72/81 (88%), Gaps = 2/81 (2%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatgg 60
||||||||||||||||||| ||||||||| || ||||| ||| ||||||| ||||||||
Sbjct: 7 ggagctccttgaagtccaatagaggttcttgc-tgggtagattaagctgctaagctatgg 65
Query: 61 atcccacagtcctatgtatca 81
|| |||||||||||| |||||
Sbjct: 66 at-ccacagtcctatctatca 85
>51604_ptc-miR159c:pmrd
Length = 183
Score = 73.8 bits (37), Expect = 4e-14
Identities = 72/81 (88%), Gaps = 2/81 (2%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatgg 60
||||||||||||||||||| ||||||||| || ||||| ||| ||||||| ||||||||
Sbjct: 12 ggagctccttgaagtccaatagaggttcttgc-tgggtagattaagctgctaagctatgg 70
Query: 61 atcccacagtcctatgtatca 81
|| |||||||||||| |||||
Sbjct: 71 at-ccacagtcctatctatca 90
>51602_ptc-miR159a:pmrd
Length = 183
Score = 73.8 bits (37), Expect = 4e-14
Identities = 72/81 (88%), Gaps = 2/81 (2%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatgg 60
||||||||||||||||||| ||||||||| || ||||| ||| ||||||| ||||||||
Sbjct: 12 ggagctccttgaagtccaatagaggttcttgc-tgggtagattaagctgctaagctatgg 70
Query: 61 atcccacagtcctatgtatca 81
|| |||||||||||| |||||
Sbjct: 71 at-ccacagtcctatctatca 90
>54777_vvi-miR159c:pmrd
Length = 190
Score = 61.9 bits (31), Expect = 2e-10
Identities = 65/75 (86%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatgg 60
||||||||||||||||||| ||||| ||| | ||||| ||||||||||||| |||||
Sbjct: 10 ggagctccttgaagtccaatagagggtcttact-gggtagattgagctgctgacttatgg 68
Query: 61 atcccacagtcctat 75
||||||||| |||||
Sbjct: 69 atcccacagccctat 83
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 113 gataggcttgtggcttgcatat 134
||||||||||||||||||||||
Sbjct: 104 gataggcttgtggcttgcatat 125
>48539_gma-miR159a:pmrd
Length = 214
Score = 60.0 bits (30), Expect = 7e-10
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatgg 60
||||||||||||||||||| |||| ||| | |||| |||||||||||| ||||||||
Sbjct: 22 ggagctccttgaagtccaattgaggatcttact-gggtgaattgagctgcttagctatgg 80
Query: 61 atcccacagt 70
||||||||||
Sbjct: 81 atcccacagt 90
>51603_ptc-miR159b:pmrd
Length = 187
Score = 54.0 bits (27), Expect = 4e-08
Identities = 64/75 (85%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatgg 60
||||||||||||||||||| ||| | || || ||||| || ||||||||||||||||
Sbjct: 12 ggagctccttgaagtccaatagaagctcctgct-gggtagatcgagctgctgagctatga 70
Query: 61 atcccacagtcctat 75
||||||||| |||||
Sbjct: 71 atcccacagccctat 85
>54378_pvu-miR159:pmrd
Length = 174
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 41 attgagctgctgagctatggatcccacagt 70
||||||||||| ||||||||||||||||||
Sbjct: 42 attgagctgcttagctatggatcccacagt 71
>54377_pvu-miR159:pmrd
Length = 174
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 41 attgagctgctgagctatggatcccacagt 70
||||||||||| ||||||||||||||||||
Sbjct: 42 attgagctgcttagctatggatcccacagt 71
>54540_sly-miR159:pmrd
Length = 177
Score = 46.1 bits (23), Expect = 1e-05
Identities = 63/75 (84%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatgg 60
||||||||||||||||||| | | |||| || || |||||||||||||||| ||||||
Sbjct: 2 ggagctccttgaagtccaacaaaaaatctaaca-ggttaaattgagctgctgacctatgg 60
Query: 61 atcccacagtcctat 75
|| || ||| |||||
Sbjct: 61 attcctcagccctat 75
>51338_pgl-miR159:pmrd
Length = 226
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 113 gataggcttgtggcttgcat 132
||||||||||||||||||||
Sbjct: 150 gataggcttgtggcttgcat 169
