miRNEST 2.0, an integrative microRNA resource :: BLAST
>48338_bna-miR156c:pmrd
Length = 155
Score = 147 bits (74), Expect = 3e-36
Identities = 77/78 (98%)
Strand = Plus / Plus
Query: 69 ggatataaggaaattcaagaaagagaggaaaaaagagcctgcatctctactcttttgtgc 128
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 61 ggatataaggaaattcaagaaagagaggaaaaaagagcctgcatctttactcttttgtgc 120
Query: 129 tctctatacttctgtcaa 146
||||||||||||||||||
Sbjct: 121 tctctatacttctgtcaa 138
Score = 83.8 bits (42), Expect = 3e-17
Identities = 42/42 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcactaaggatgacatgcaagtaca 42
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18 ttgacagaagatagagagcactaaggatgacatgcaagtaca 59
>46926_ath-miR157c:pmrd
Length = 217
Score = 135 bits (68), Expect = 1e-32
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcactaaggatgacatgcaagtacatacatatatatcatcaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24 ttgacagaagatagagagcactaaggatgacatgcaagtacatacatatatatcatcaca 83
Query: 61 ccgcaagtggat 72
||||| ||||||
Sbjct: 84 ccgcatgtggat 95
>48393_bra-miR157a:pmrd
Length = 149
Score = 103 bits (52), Expect = 4e-23
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcactaaggatgacatgcaagtacatacatatatatcatcaca 60
|||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 14 ttgacagaagatagagagcactaaggatgacatgcaagtacatatgtatgtatcatcaca 73
Query: 61 ccgc 64
||||
Sbjct: 74 ccgc 77
Score = 71.9 bits (36), Expect = 1e-13
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 98 aaaaagagcctgcatctctactcttttgtgctctctatacttctgtca 145
||||| ||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 92 aaaaatagcctgcatgtctactctttcgtgctctctatacttctgtca 139
>48337_bna-miR156b:pmrd
Length = 208
Score = 103 bits (52), Expect = 4e-23
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcactaaggatgacatgcaagtacatacatatatatcatcaca 60
|||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 25 ttgacagaagatagagagcactaaggatgacatgcaagtacatatgtatgtatcatcaca 84
Query: 61 ccgc 64
||||
Sbjct: 85 ccgc 88
>48384_bol-miR157a:pmrd
Length = 106
Score = 83.8 bits (42), Expect = 3e-17
Identities = 42/42 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcactaaggatgacatgcaagtaca 42
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 ttgacagaagatagagagcactaaggatgacatgcaagtaca 47
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 109 gcatctctactcttttgtgctctctatacttctgtcaa 146
|||||| |||||||||||||||||||||||||||||||
Sbjct: 65 gcatctttactcttttgtgctctctatacttctgtcaa 102
>48698_mtr-miR157:pmrd
Length = 111
Score = 56.0 bits (28), Expect = 7e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcactaaggatgacatgca 36
|||||||||||||||| ||||||||||||| |||||
Sbjct: 1 ttgacagaagatagagggcactaaggatgatatgca 36
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 122 tttgtgctctctatacttctgtca 145
||||||||||||| ||||||||||
Sbjct: 87 tttgtgctctctagacttctgtca 110
>46927_ath-miR157d:pmrd
Length = 221
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagatagagagcactaaggatg 29
||||||||||||||||||||||||||||
Sbjct: 24 tgacagaagatagagagcactaaggatg 51
Score = 46.1 bits (23), Expect = 7e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 107 ctgcatctctactcttttgtgctctctatacttctgtca 145
||||||||||| || | |||||||||||| |||||||||
Sbjct: 155 ctgcatctctattcctatgtgctctctatgcttctgtca 193
>54661_stu-miR157a:pmrd
Length = 91
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcactaaggatgacatgc 35
|||||||||||||||||||||||| ||||| ||||
Sbjct: 1 ttgacagaagatagagagcactaatgatgatatgc 35
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 122 tttgtgctctctatacttctgtca 145
|||||||||||||| |||||||||
Sbjct: 67 tttgtgctctctatgcttctgtca 90
>54532_sly-miR156a:pmrd
Length = 100
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcactaaggatgacatgc 35
|||||||||||||||||||||||| ||||| ||||
Sbjct: 1 ttgacagaagatagagagcactaatgatgatatgc 35
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 109 gcatctctactcttttgtgctctctatacttctgtca 145
||||||| | || |||||||||||||| |||||||||
Sbjct: 63 gcatctcaattcatttgtgctctctatgcttctgtca 99
>48531_gma-miR156d:pmrd
Length = 151
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 116 tactcttttgtgctctctatacttctgtca 145
||||| ||||||||||||||||||||||||
Sbjct: 102 tactcctttgtgctctctatacttctgtca 131
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 21 ttgacagaagatagagagcac 41
>52807_ptc-miRf10985-akr:pmrd
Length = 87
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcactaaggatgacatgca 36
|||||||||||||||||||||| | ||||| |||||
Sbjct: 2 ttgacagaagatagagagcactgacgatgaaatgca 37
>51598_ptc-miR156h:pmrd
Length = 103
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcactaaggatgacatgca 36
|||||||||||||||||||||| | ||||| |||||
Sbjct: 11 ttgacagaagatagagagcactgacgatgaaatgca 46
>48537_gma-miR157c:pmrd
Length = 84
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 1 ttgacagaagatagagagcactaaggatgacatgca 36
|||||||||||||||||||||| | ||||| |||||
Sbjct: 84 ttgacagaagatagagagcactgatgatgaaatgca 49
>48532_gma-miR156e:pmrd
Length = 124
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcactaaggatgacatgca 36
|||||||||||||||||||||| | ||||| |||||
Sbjct: 21 ttgacagaagatagagagcactgatgatgaaatgca 56
>46862_aqc-miR156b:pmrd
Length = 83
Score = 48.1 bits (24), Expect = 2e-06
Identities = 40/44 (90%), Gaps = 1/44 (2%)
Strand = Plus / Plus
Query: 102 agagcctgcatctctactcttttgtgctctctatacttctgtca 145
|||| ||||||||| |||| |||||||||||||| |||||||||
Sbjct: 39 agagtctgcatctc-actcctttgtgctctctatgcttctgtca 81
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagatagagagcac 21
||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcac 20
>54774_vvi-miR156i:pmrd
Length = 103
Score = 46.1 bits (23), Expect = 7e-06
Identities = 39/43 (90%), Gaps = 1/43 (2%)
Strand = Plus / Plus
Query: 103 gagcctgcatctctactcttttgtgctctctatacttctgtca 145
||||| ||||||| |||| |||||||||||||| |||||||||
Sbjct: 49 gagccagcatctc-actcctttgtgctctctattcttctgtca 90
Score = 44.1 bits (22), Expect = 3e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcactaaggatgacatgcaag 38
||||||||||||||||||||| | ||||| |||||||
Sbjct: 11 ttgacagaagatagagagcacagatgatgaaatgcaag 48
>54772_vvi-miR156g:pmrd
Length = 103
Score = 44.1 bits (22), Expect = 3e-05
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 108 tgcatctctactcttttgtgctctctatacttctgtca 145
|||||||| |||| ||||||||||||| ||||||||||
Sbjct: 54 tgcatctc-actcctttgtgctctctagacttctgtca 90
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 11 ttgacagaagatagagagcac 31
>54771_vvi-miR156f:pmrd
Length = 105
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 11 ttgacagaagatagagagcac 31
>54534_sly-miR156c:pmrd
Length = 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcac 21
>54533_sly-miR156b:pmrd
Length = 84
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcac 21
>52045_ptc-miRf10223-akr:pmrd
Length = 86
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 3 ttgacagaagatagagagcac 23
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 117 actcttttgtgctctctatacttctgtca 145
|||| |||||||||||||| |||||||||
Sbjct: 55 actcctttgtgctctctatgcttctgtca 83
>51600_ptc-miR156j:pmrd
Length = 100
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 11 ttgacagaagatagagagcac 31
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 117 actcttttgtgctctctatacttctgtca 145
|||| |||||||||||||| |||||||||
Sbjct: 63 actcctttgtgctctctatgcttctgtca 91
>51599_ptc-miR156i:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 11 ttgacagaagatagagagcac 31
>51597_ptc-miR156g:pmrd
Length = 103
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 11 ttgacagaagatagagagcac 31
>48790_nta-miR157:pmrd
Length = 131
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcac 21
>48697_mtr-miR156h:pmrd
Length = 94
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 6 ttgacagaagatagagagcac 26
>48696_mtr-miR156f:pmrd
Length = 94
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 6 ttgacagaagatagagagcac 26
>48695_mtr-miR156e:pmrd
Length = 172
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 6 ttgacagaagatagagagcac 26
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 117 actcttttgtgctctctatacttctgtca 145
|||| |||||||||||||| |||||||||
Sbjct: 139 actcctttgtgctctctatgcttctgtca 167
>48675_lja-miR157a:pmrd
Length = 58
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcac 21
>48642_han-miR157a:pmrd
Length = 86
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcac 21
>48631_gra-miR157b:pmrd
Length = 91
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 5 ttgacagaagatagagagcac 25
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 117 actcttttgtgctctctatacttctgtca 145
|||| |||||||||||||| |||||||||
Sbjct: 58 actcctttgtgctctctatgcttctgtca 86
>48630_gra-miR157a:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 5 ttgacagaagatagagagcac 25
>48530_gma-miR156c:pmrd
Length = 185
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 146 ttgacagaagatagagagcac 166
>46925_ath-miR157b:pmrd
Length = 132
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 19 ttgacagaagatagagagcac 39
>46924_ath-miR157a:pmrd
Length = 98
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagcac 21
|||||||||||||||||||||
Sbjct: 4 ttgacagaagatagagagcac 24
>54570_smo-miR156b:pmrd
Length = 112
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagatagagagcac 21
||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcac 31
>54537_sly-miR157c:pmrd
Length = 123
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagca 20
||||||||||||||||||||
Sbjct: 103 ttgacagaagatagagagca 122
>54536_sly-miR157b:pmrd
Length = 430
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagca 20
||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagca 20
>54535_sly-miR157a:pmrd
Length = 53
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagca 20
||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagca 20
>51552_pta-miR156b:pmrd
Length = 83
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagatagagagcac 21
||||||||||||||||||||
Sbjct: 3 tgacagaagatagagagcac 22
>51551_pta-miR156a:pmrd
Length = 83
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagatagagagcac 21
||||||||||||||||||||
Sbjct: 3 tgacagaagatagagagcac 22
>51323_pco-miR157:pmrd
Length = 184
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagca 20
||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagca 20
>48677_lja-miR157c:pmrd
Length = 460
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagca 20
||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagca 20
>48670_ini-miR157b:pmrd
Length = 183
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagca 20
||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagca 20
>48669_ini-miR157a:pmrd
Length = 126
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagca 20
||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagca 20
>48668_iba-miR157:pmrd
Length = 283
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagatagagagca 20
||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagca 20
>46861_aqc-miR156a:pmrd
Length = 81
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagatagagagcac 21
||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcac 20
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 122 tttgtgctctctatacttctgtca 145
|||||||||||||| |||||||||
Sbjct: 56 tttgtgctctctatgcttctgtca 79
