miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>51551_pta-miR156a:pmrd
Length = 83
Score = 145 bits (73), Expect = 5e-36
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacatccgctcacatgccgggactctgcgtttgaggtgtatgtggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 cagaagatagagagcacatccgctcacatgccgggactctgcgtttgaggtgtatgtggt 65
Query: 61 ctccatgattctg 73
|||||||||||||
Sbjct: 66 ctccatgattctg 78
>51552_pta-miR156b:pmrd
Length = 83
Score = 93.7 bits (47), Expect = 2e-20
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacatccgctcacatgccgggactctgcgtttgaggtgtatgtggt 60
|||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||| |
Sbjct: 6 cagaagatagagagcacaaccgctcagatgccggcactctgcgtttgaggtgtatgtgct 65
Query: 61 ctc 63
|||
Sbjct: 66 ctc 68
>48696_mtr-miR156f:pmrd
Length = 94
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacatc 20
||||||||||||||||||||
Sbjct: 10 cagaagatagagagcacatc 29
