miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>48369_bna-miR171g:pmrd
          Length = 115

 Score = 52.0 bits (26), Expect = 6e-08
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                            
Query: 50 tctcttagatatctgattgagccgcgtcaatatc 83
          |||||||| ||||||||||||||||| |||||||
Sbjct: 65 tctcttagttatctgattgagccgcgccaatatc 98



 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  gatattggcctggttcattcagat 24
          ||||||||||||||||| ||||||
Sbjct: 21 gatattggcctggttcactcagat 44




>48407_bra-miR171e:pmrd
          Length = 119

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 1  gatattggcctggttcattcagatcttcc 29
          ||||||||||||||||| |||||||||||
Sbjct: 18 gatattggcctggttcactcagatcttcc 46



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 50  tctcttagatatctgattgagccgcgtcaatatc 83
           ||||| || ||||||||||||||||| |||||||
Sbjct: 71  tctctcagttatctgattgagccgcgccaatatc 104




>48368_bna-miR171f:pmrd
          Length = 119

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 1  gatattggcctggttcattcagatcttcc 29
          ||||||||||||||||| |||||||||||
Sbjct: 18 gatattggcctggttcactcagatcttcc 46



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 50  tctcttagatatctgattgagccgcgtcaatatc 83
           ||||| || ||||||||||||||||| |||||||
Sbjct: 71  tctctcagttatctgattgagccgcgccaatatc 104




>46980_ath-miR171m:pmrd
          Length = 92

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 1  gatattggcctggttcattcagatctt 27
          ||||||||||||||||| |||||||||
Sbjct: 1  gatattggcctggttcactcagatctt 27



 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 59 tatctgattgagccgcgtcaatatc 83
          ||||||||||||||||| |||||||
Sbjct: 68 tatctgattgagccgcgccaatatc 92




>46977_ath-miR171a:pmrd
          Length = 123

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 1  gatattggcctggttcattcagatctt 27
          ||||||||||||||||| |||||||||
Sbjct: 17 gatattggcctggttcactcagatctt 43



 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 59  tatctgattgagccgcgtcaatatc 83
           ||||||||||||||||| |||||||
Sbjct: 84  tatctgattgagccgcgccaatatc 108




>46975_ath-miR170m:pmrd
          Length = 92

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 1  gatattggcctggttcattcagatctt 27
          ||||||||||||||||| |||||||||
Sbjct: 1  gatattggcctggttcactcagatctt 27



 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 59 tatctgattgagccgcgtcaatatc 83
          ||||||||||||||||| |||||||
Sbjct: 68 tatctgattgagccgcgccaatatc 92




>54829_vvi-miR171b:pmrd
          Length = 99

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 63 tgattgagccgcgtcaatatc 83
          |||||||||||||||||||||
Sbjct: 69 tgattgagccgcgtcaatatc 89




>54458_sbi-miR171g:pmrd
          Length = 77

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 59 tatctgattgagccgcgtcaatatc 83
          ||||||||||||||||| |||||||
Sbjct: 53 tatctgattgagccgcgccaatatc 77




>51692_ptc-miR171i:pmrd
          Length = 129

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 1  gatattggcctggttcattcagatc 25
          ||||||||||||||||| |||||||
Sbjct: 11 gatattggcctggttcactcagatc 35




>48895_osa-miR171a:pmrd
          Length = 96

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 59 tatctgattgagccgcgtcaatatc 83
          ||||||||||||||||| |||||||
Sbjct: 63 tatctgattgagccgcgccaatatc 87




>54459_sbi-miR171h:pmrd
          Length = 81

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 64 gattgagccgcgtcaatatc 83
          ||||||||||||||||||||
Sbjct: 60 gattgagccgcgtcaatatc 79




>48903_osa-miR171i:pmrd
          Length = 120

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 64  gattgagccgcgtcaatatc 83
           ||||||||||||||||||||
Sbjct: 89  gattgagccgcgtcaatatc 108




>55028_zma-miR171a:pmrd
          Length = 99

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 61 tctgattgagccgcgtcaatatc 83
          ||||||||||||||| |||||||
Sbjct: 77 tctgattgagccgcgccaatatc 99




>54832_vvi-miR171e:pmrd
          Length = 103

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 61 tctgattgagccgcgtcaatatc 83
          ||||||||||||||| |||||||
Sbjct: 68 tctgattgagccgcgccaatatc 90




>54551_sly-miR171a:pmrd
          Length = 122

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 1  gatattggcctggttcattcaga 23
          ||||||||||||||||| |||||
Sbjct: 16 gatattggcctggttcactcaga 38




>48723_mtr-miR171g:pmrd
          Length = 105

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 1  gatattggcctggttcattcaga 23
          ||||||||||||||||| |||||
Sbjct: 6  gatattggcctggttcactcaga 28




>48722_mtr-miR171d:pmrd
          Length = 105

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 1  gatattggcctggttcattcaga 23
          ||||||||||||||||| |||||
Sbjct: 6  gatattggcctggttcactcaga 28




>48566_gma-miR170n:pmrd
          Length = 80

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 65 attgagccgcgtcaatatc 83
          |||||||||||||||||||
Sbjct: 62 attgagccgcgtcaatatc 80