miRNEST 2.0, an integrative microRNA resource :: BLAST
>54675_tae-miR160:pmrd
Length = 148
Score = 69.9 bits (35), Expect = 4e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccactcgcgtagctgcca 35
|||||||||||||||||||||||||||||||||||
Sbjct: 23 gcctggctccctgtatgccactcgcgtagctgcca 57
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 88 tggctctactgcggatggcgtgcgaggagccaagc 122
||||||||| |||||||||||||||||||||||||
Sbjct: 76 tggctctaccgcggatggcgtgcgaggagccaagc 110
>54407_sbi-miR160d:pmrd
Length = 100
Score = 69.9 bits (35), Expect = 4e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 88 tggctctactgcggatggcgtgcgaggagccaagc 122
|||||||||||||||||||||||||||||||||||
Sbjct: 65 tggctctactgcggatggcgtgcgaggagccaagc 99
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccactcgcgtagctgcca 35
||||||||||||||||||||||||| |||||||||
Sbjct: 2 gcctggctccctgtatgccactcgcttagctgcca 36
>48833_osa-miR160n:pmrd
Length = 131
Score = 69.9 bits (35), Expect = 4e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccactcgcgtagctgcca 35
|||||||||||||||||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgccactcgcgtagctgcca 36
Score = 69.9 bits (35), Expect = 4e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 88 tggctctactgcggatggcgtgcgaggagccaagc 122
|||||||||||||||||||||||||||||||||||
Sbjct: 95 tggctctactgcggatggcgtgcgaggagccaagc 129
>48829_osa-miR160d:pmrd
Length = 142
Score = 69.9 bits (35), Expect = 4e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccactcgcgtagctgcca 35
|||||||||||||||||||||||||||||||||||
Sbjct: 9 gcctggctccctgtatgccactcgcgtagctgcca 43
Score = 69.9 bits (35), Expect = 4e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 88 tggctctactgcggatggcgtgcgaggagccaagc 122
|||||||||||||||||||||||||||||||||||
Sbjct: 102 tggctctactgcggatggcgtgcgaggagccaagc 136
>54941_zma-miR160d:pmrd
Length = 142
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccactcgcgtagctgcca 35
||||||||||||||||||||||||| | |||||||
Sbjct: 22 gcctggctccctgtatgccactcgcatggctgcca 56
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 88 tggctctactgcggatggcgtgcgaggagccaagc 122
|||||| ||||||||||||||||| ||||||||||
Sbjct: 88 tggctccactgcggatggcgtgcgtggagccaagc 122
>54946_zma-miR160i:pmrd
Length = 81
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccactcgc 25
|||||||||||||||||||||||||
Sbjct: 3 gcctggctccctgtatgccactcgc 27
>54942_zma-miR160e:pmrd
Length = 94
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccactcgc 25
|||||||||||||||||||||||||
Sbjct: 10 gcctggctccctgtatgccactcgc 34
>54408_sbi-miR160e:pmrd
Length = 95
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccactcgc 25
|||||||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgccactcgc 26
>54940_zma-miR160c:pmrd
Length = 100
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccactc 23
|||||||||||||||||||||||
Sbjct: 8 gcctggctccctgtatgccactc 30
>54759_ttu-miR160a:pmrd
Length = 87
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccactc 23
|||||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgccactc 24
>54406_sbi-miR160c:pmrd
Length = 83
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccactc 23
|||||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgccactc 24
>48832_osa-miR160m:pmrd
Length = 82
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccactc 23
|||||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgccactc 24
>48830_osa-miR160e:pmrd
Length = 114
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccactcgcgtagctgcca 35
||||||||||||||||||| ||||| | |||||||
Sbjct: 12 gcctggctccctgtatgccgctcgcatggctgcca 46
>48828_osa-miR160c:pmrd
Length = 99
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccactc 23
|||||||||||||||||||||||
Sbjct: 8 gcctggctccctgtatgccactc 30
>48827_osa-miR160b:pmrd
Length = 139
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccactc 23
|||||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgccactc 53
>48791_oba-miR160:pmrd
Length = 90
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 92 tctactgcggatggcgtgcgaggagccaagc 122
||||| |||| ||||||||||||||||||||
Sbjct: 56 tctacggcgggtggcgtgcgaggagccaagc 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccact 22
||||||||||||||||||||||
Sbjct: 5 gcctggctccctgtatgccact 26
>54781_vvi-miR160d:pmrd
Length = 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 98 gcggatggcgtgcgaggagcca 119
||||||||||||||||||||||
Sbjct: 65 gcggatggcgtgcgaggagcca 86
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>54780_vvi-miR160c:pmrd
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 97 tgcggatggcgtgcgaggagccaagc 122
||||| ||||||||||||||||||||
Sbjct: 68 tgcgggtggcgtgcgaggagccaagc 93
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgccac 32
>51363_ppt-miR160e:pmrd
Length = 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccact 22
||||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgccact 52
>54947_zma-miR160m:pmrd
Length = 81
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgccac 22
>54945_zma-miR160h:pmrd
Length = 86
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgccac 22
>54944_zma-miR160g:pmrd
Length = 86
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgccac 22
>54943_zma-miR160f:pmrd
Length = 116
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccactcgc 25
||||||||||||||||||| |||||
Sbjct: 22 gcctggctccctgtatgccgctcgc 46
>54939_zma-miR160b:pmrd
Length = 121
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 22 gcctggctccctgtatgccac 42
>54938_zma-miR160a:pmrd
Length = 104
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 11 gcctggctccctgtatgccac 31
>54575_smo-miR160b:pmrd
Length = 108
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 14 gcctggctccctgtatgccac 34
>54405_sbi-miR160b:pmrd
Length = 82
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgccac 22
>54404_sbi-miR160a:pmrd
Length = 84
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgccac 22
>53874_ptc-miRf12052-akr:pmrd
Length = 110
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 13 gcctggctccctgtatgccac 33
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 103 tggcgtgcgaggagccaagc 122
||||||||||||||||||||
Sbjct: 76 tggcgtgcgaggagccaagc 95
>51611_ptc-miR160d:pmrd
Length = 103
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgccac 32
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 103 tggcgtgcgaggagccaagc 122
||||||||||||||||||||
Sbjct: 75 tggcgtgcgaggagccaagc 94
>51608_ptc-miR160a:pmrd
Length = 102
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgccac 32
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 103 tggcgtgcgaggagccaagc 122
||||||||||||||||||||
Sbjct: 74 tggcgtgcgaggagccaagc 93
>51367_ppt-miR160i:pmrd
Length = 139
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgccac 51
>51364_ppt-miR160f:pmrd
Length = 138
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgccac 51
>51359_ppt-miR160a:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgccac 32
>51334_pga-miR160:pmrd
Length = 80
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgccac 22
>48826_osa-miR160a:pmrd
Length = 88
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 5 gcctggctccctgtatgccac 25
>47338_ath-miRf10238-akr:pmrd
Length = 89
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 6 gcctggctccctgtatgccac 26
>46936_ath-miR160c:pmrd
Length = 89
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 6 gcctggctccctgtatgccac 26
>46935_ath-miR160b:pmrd
Length = 89
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccac 21
|||||||||||||||||||||
Sbjct: 6 gcctggctccctgtatgccac 26
>54783_vvi-miR160f:pmrd
Length = 102
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>54574_smo-miR160a:pmrd
Length = 106
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>54541_sly-miR160a:pmrd
Length = 129
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 21 gcctggctccctgtatgcca 40
>51610_ptc-miR160c:pmrd
Length = 98
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>51609_ptc-miR160b:pmrd
Length = 98
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>51360_ppt-miR160b:pmrd
Length = 103
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>48704_mtr-miR160e:pmrd
Length = 91
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 7 gcctggctccctgtatgcca 26
>48703_mtr-miR160d:pmrd
Length = 91
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 7 gcctggctccctgtatgcca 26
>48702_mtr-miR160b:pmrd
Length = 91
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 7 gcctggctccctgtatgcca 26
>48658_hvv-miR160a:pmrd
Length = 344
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 325 gcctggctccctgtatgcca 344
>48542_gma-miR160a:pmrd
Length = 119
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 22 gcctggctccctgtatgcca 41
>48397_bra-miR160a:pmrd
Length = 127
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 27 gcctggctccctgtatgcca 46
>48396_bra-miR160a:pmrd
Length = 127
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 27 gcctggctccctgtatgcca 46
>47213_ath-miRf10113-akr:pmrd
Length = 85
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 5 gcctggctccctgtatgcca 24
>46934_ath-miR160a:pmrd
Length = 85
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 5 gcctggctccctgtatgcca 24
>46865_aqc-miR160b:pmrd
Length = 82
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgcca 21
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 100 ggatggcgtgcgaggagcca 119
||||||||||||||||||||
Sbjct: 57 ggatggcgtgcgaggagcca 76
