miRNEST 2.0, an integrative microRNA resource :: BLAST
>46996_ath-miR390b:pmrd
Length = 120
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 aagctcaggagggatagcgccatggc 26
||||||||||||||||||||||||||
Sbjct: 15 aagctcaggagggatagcgccatggc 40
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 52 gcgctatccatcctgagtt 70
|||||||||||||||||||
Sbjct: 87 gcgctatccatcctgagtt 105
>48729_mtr-miR390:pmrd
Length = 90
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 39 ttgatcttcatttgcgctatccatcctgagttt 71
||||||||| ||||||||||||||||||||||
Sbjct: 58 ttgatcttctcttgcgctatccatcctgagttt 90
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 aagctcaggagggatagcgccat 23
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Sbjct: 1 aagctcaggagggatagcgccat 23
>48500_ghr-miR390c:pmrd
Length = 114
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 aagctcaggagggatagcgccatgg 25
|||||||||||||||||||||||||
Sbjct: 11 aagctcaggagggatagcgccatgg 35
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 52 gcgctatccatcctgagttt 71
||||||||||||||||||||
Sbjct: 87 gcgctatccatcctgagttt 106
>48499_ghr-miR390b:pmrd
Length = 132
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 aagctcaggagggatagcgccatgg 25
|||||||||||||||||||||||||
Sbjct: 18 aagctcaggagggatagcgccatgg 42
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 52 gcgctatccatcctgagttt 71
||||||||||||||||||||
Sbjct: 94 gcgctatccatcctgagttt 113
>48498_ghr-miR390a:pmrd
Length = 124
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 aagctcaggagggatagcgccatgg 25
|||||||||||||||||||||||||
Sbjct: 15 aagctcaggagggatagcgccatgg 39
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 52 gcgctatccatcctgagttt 71
||||||||||||||||||||
Sbjct: 91 gcgctatccatcctgagttt 110
>54848_vvi-miR390:pmrd
Length = 140
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 aagctcaggagggatagcgccatg 24
||||||||||||||||||||||||
Sbjct: 11 aagctcaggagggatagcgccatg 34
>52711_ptc-miRf10889-akr:pmrd
Length = 127
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 aagctcaggagggatagcgccatg 24
||||||||||||||||||||||||
Sbjct: 14 aagctcaggagggatagcgccatg 37
>51718_ptc-miR390c:pmrd
Length = 123
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 aagctcaggagggatagcgccatg 24
||||||||||||||||||||||||
Sbjct: 11 aagctcaggagggatagcgccatg 34
>51716_ptc-miR390a:pmrd
Length = 119
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 aagctcaggagggatagcgccatg 24
||||||||||||||||||||||||
Sbjct: 11 aagctcaggagggatagcgccatg 34
>48372_bna-miR390c:pmrd
Length = 128
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 aagctcaggagggatagcgccatg 24
||||||||||||||||||||||||
Sbjct: 23 aagctcaggagggatagcgccatg 46
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 52 gcgctatccatcctgagtt 70
|||||||||||||||||||
Sbjct: 85 gcgctatccatcctgagtt 103
>48370_bna-miR390a:pmrd
Length = 144
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 aagctcaggagggatagcgccatg 24
||||||||||||||||||||||||
Sbjct: 33 aagctcaggagggatagcgccatg 56
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 52 gcgctatccatcctgagtt 70
|||||||||||||||||||
Sbjct: 95 gcgctatccatcctgagtt 113
>47212_ath-miRf10112-akr:pmrd
Length = 107
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 aagctcaggagggatagcgccatg 24
||||||||||||||||||||||||
Sbjct: 18 aagctcaggagggatagcgccatg 41
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 52 gcgctatccatcctgagttt 71
||||||||||||||||||||
Sbjct: 69 gcgctatccatcctgagttt 88
>47211_ath-miRf10111-akr:pmrd
Length = 71
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 aagctcaggagggatagcgccatg 24
||||||||||||||||||||||||
Sbjct: 1 aagctcaggagggatagcgccatg 24
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 52 gcgctatccatcctgagttt 71
||||||||||||||||||||
Sbjct: 52 gcgctatccatcctgagttt 71
>46995_ath-miR390a:pmrd
Length = 107
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 aagctcaggagggatagcgccatg 24
||||||||||||||||||||||||
Sbjct: 18 aagctcaggagggatagcgccatg 41
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 52 gcgctatccatcctgagttt 71
||||||||||||||||||||
Sbjct: 69 gcgctatccatcctgagttt 88
>51391_ppt-miR390a:pmrd
Length = 137
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 aagctcaggagggatagcgccat 23
|||||||||||||||||||||||
Sbjct: 16 aagctcaggagggatagcgccat 38
>48371_bna-miR390b:pmrd
Length = 105
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 aagctcaggagggatagcgccat 23
|||||||||||||||||||||||
Sbjct: 18 aagctcaggagggatagcgccat 40
>55055_zma-miR390:pmrd
Length = 177
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 aagctcaggagggatagcgcc 21
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Sbjct: 1 aagctcaggagggatagcgcc 21
>53138_ptc-miRf11316-akr:pmrd
Length = 94
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 aagctcaggagggatagcgcc 21
|||||||||||||||||||||
Sbjct: 4 aagctcaggagggatagcgcc 24
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 52 gcgctatccatcctgagttt 71
||||||||||||||||||||
Sbjct: 72 gcgctatccatcctgagttt 91
>51719_ptc-miR390d:pmrd
Length = 106
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 aagctcaggagggatagcgcc 21
|||||||||||||||||||||
Sbjct: 11 aagctcaggagggatagcgcc 31
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 52 gcgctatccatcctgagttt 71
||||||||||||||||||||
Sbjct: 79 gcgctatccatcctgagttt 98
>51717_ptc-miR390b:pmrd
Length = 106
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 aagctcaggagggatagcgcc 21
|||||||||||||||||||||
Sbjct: 11 aagctcaggagggatagcgcc 31
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 52 gcgctatccatcctgagttt 71
||||||||||||||||||||
Sbjct: 79 gcgctatccatcctgagttt 98
>51392_ppt-miR390b:pmrd
Length = 175
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 aagctcaggagggatagcgcc 21
|||||||||||||||||||||
Sbjct: 28 aagctcaggagggatagcgcc 48
>48916_osa-miR390:pmrd
Length = 91
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 aagctcaggagggatagcgcc 21
|||||||||||||||||||||
Sbjct: 19 aagctcaggagggatagcgcc 39
>51394_ppt-miR390c:pmrd
Length = 135
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 2 agctcaggagggatagcgcc 21
||||||||||||||||||||
Sbjct: 14 agctcaggagggatagcgcc 33
>51393_ppt-miR390c:pmrd
Length = 135
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 2 agctcaggagggatagcgcc 21
||||||||||||||||||||
Sbjct: 14 agctcaggagggatagcgcc 33
