miRNEST 2.0, an integrative microRNA resource :: BLAST
>54540_sly-miR159:pmrd
Length = 177
Score = 337 bits (170), Expect = 2e-93
Identities = 177/178 (99%), Gaps = 1/178 (0%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatgg 60
Query: 61 attcctcagccctatctatttatgatttcaaacatatagataggtttgtgggtttgcata 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 61 attcctcagccctatctatttatgatttcaaacatatagataggttt-tgggtttgcata 119
Query: 121 tgtcaggagctttattttaccctttgtttgatcattttttggattgaagggagctcta 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 tgtcaggagctttattttaccctttgtttgatcattttttggattgaagggagctcta 177
>51603_ptc-miR159b:pmrd
Length = 187
Score = 60.0 bits (30), Expect = 6e-10
Identities = 57/65 (87%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 114 ttgcatatgtcaggagctttattttaccctttgtttgatcattttttggattgaagggag 173
|||||||| |||||||||||||| ||| |||| |||| |||||||||||||||||||
Sbjct: 116 ttgcatatctcaggagctttatt--acctaatgttagatctttttttggattgaagggag 173
Query: 174 ctcta 178
|||||
Sbjct: 174 ctcta 178
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaa 20
||||||||||||||||||||
Sbjct: 11 tggagctccttgaagtccaa 30
>54777_vvi-miR159c:pmrd
Length = 190
Score = 56.0 bits (28), Expect = 9e-09
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatgg 60
|||||||||||||||||||| | | ||| || || || |||||||||||||| |||||
Sbjct: 9 tggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgg 68
Query: 61 attcctcagccctatc 76
|| || ||||||||||
Sbjct: 69 atcccacagccctatc 84
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctcta 178
|||||||||||||||||||||
Sbjct: 160 tttggattgaagggagctcta 180
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 156 tttttggattgaagggagctcta 178
|||||||||||||||||||||||
Sbjct: 147 tttttggattgaagggagctcta 169
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaa 20
||||||||||||||||||||
Sbjct: 6 tggagctccttgaagtccaa 25
>51604_ptc-miR159c:pmrd
Length = 183
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 156 tttttggattgaagggagctcta 178
|||||||||||||||||||||||
Sbjct: 152 tttttggattgaagggagctcta 174
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaa 20
||||||||||||||||||||
Sbjct: 11 tggagctccttgaagtccaa 30
>51602_ptc-miR159a:pmrd
Length = 183
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 156 tttttggattgaagggagctcta 178
|||||||||||||||||||||||
Sbjct: 152 tttttggattgaagggagctcta 174
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaa 20
||||||||||||||||||||
Sbjct: 11 tggagctccttgaagtccaa 30
>54378_pvu-miR159:pmrd
Length = 174
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctcta 178
|||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctcta 173
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaa 20
||||||||||||||||||||
Sbjct: 2 tggagctccttgaagtccaa 21
>54377_pvu-miR159:pmrd
Length = 174
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctcta 178
|||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctcta 173
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaa 20
||||||||||||||||||||
Sbjct: 2 tggagctccttgaagtccaa 21
>48701_mtr-miR159c:pmrd
Length = 44
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctcta 178
|||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctcta 21
>48699_mtr-miR159a:pmrd
Length = 168
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctcta 178
|||||||||||||||||||||
Sbjct: 148 tttggattgaagggagctcta 168
>48686_ltu-miR159:pmrd
Length = 345
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctcta 178
|||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctcta 21
>48539_gma-miR159a:pmrd
Length = 214
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctcta 178
|||||||||||||||||||||
Sbjct: 175 tttggattgaagggagctcta 195
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaa 20
||||||||||||||||||||
Sbjct: 21 tggagctccttgaagtccaa 40
>48395_bra-miR159a:pmrd
Length = 185
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctcta 178
|||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctcta 183
>48339_bna-miR159:pmrd
Length = 183
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctcta 178
|||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctcta 181
>46931_ath-miR159a:pmrd
Length = 184
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctcta 178
|||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctcta 183
>54937_zma-miR159m:pmrd
Length = 457
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctct 177
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
>54931_zma-miR159b:pmrd
Length = 221
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctct 177
||||||||||||||||||||
Sbjct: 182 tttggattgaagggagctct 201
>54930_zma-miR159a:pmrd
Length = 246
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctct 177
||||||||||||||||||||
Sbjct: 207 tttggattgaagggagctct 226
>54674_tae-miR159b:pmrd
Length = 255
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctct 177
||||||||||||||||||||
Sbjct: 230 tttggattgaagggagctct 249
>54673_tae-miR159a:pmrd
Length = 177
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctct 177
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>54653_spr-miR159:pmrd
Length = 392
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctct 177
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
>54631_sof-miR159d:pmrd
Length = 265
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctct 177
||||||||||||||||||||
Sbjct: 226 tttggattgaagggagctct 245
>54629_sof-miR159b:pmrd
Length = 266
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctct 177
||||||||||||||||||||
Sbjct: 227 tttggattgaagggagctct 246
>54628_sof-miR159a:pmrd
Length = 265
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctct 177
||||||||||||||||||||
Sbjct: 226 tttggattgaagggagctct 245
>54392_sar-miR159:pmrd
Length = 175
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctct 177
||||||||||||||||||||
Sbjct: 155 tttggattgaagggagctct 174
>51562_pta-miR319:pmrd
Length = 206
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 153 cattttttggattgaagggagctc 176
||||| ||||||||||||||||||
Sbjct: 32 catttcttggattgaagggagctc 9
>51553_pta-miR159a:pmrd
Length = 210
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 153 cattttttggattgaagggagctc 176
||||| ||||||||||||||||||
Sbjct: 179 catttcttggattgaagggagctc 202
>51338_pgl-miR159:pmrd
Length = 226
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctct 177
||||||||||||||||||||
Sbjct: 206 tttggattgaagggagctct 225
>48825_osa-miR159m:pmrd
Length = 249
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctct 177
||||||||||||||||||||
Sbjct: 229 tttggattgaagggagctct 248
>48824_osa-miR159f:pmrd
Length = 188
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 159 ttggattgaagggagctcta 178
||||||||||||||||||||
Sbjct: 159 ttggattgaagggagctcta 178
>48820_osa-miR159b:pmrd
Length = 188
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctct 177
||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctct 177
>48819_osa-miR159a:pmrd
Length = 272
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctct 177
||||||||||||||||||||
Sbjct: 242 tttggattgaagggagctct 261
>48796_oru-miR159:pmrd
Length = 274
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 158 tttggattgaagggagctct 177
||||||||||||||||||||
Sbjct: 242 tttggattgaagggagctct 261
