miRNEST 2.0, an integrative microRNA resource :: BLAST
>47357_ath-miRf10257-akr:pmrd
Length = 94
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 47 atgctcgaagctatgtgtgctcactctctatc 78
||||| ||||||||||||||||||||||||||
Sbjct: 56 atgcttgaagctatgtgtgctcactctctatc 87
>47356_ath-miRf10256-akr:pmrd
Length = 94
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 47 atgctcgaagctatgtgtgctcactctctatc 78
||||| ||||||||||||||||||||||||||
Sbjct: 56 atgcttgaagctatgtgtgctcactctctatc 87
>46915_ath-miR156f:pmrd
Length = 132
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 47 atgctcgaagctatgtgtgctcactctctatc 78
||||| ||||||||||||||||||||||||||
Sbjct: 74 atgcttgaagctatgtgtgctcactctctatc 105
>48490_ghr-miR156c:pmrd
Length = 97
Score = 52.0 bits (26), Expect = 6e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 47 atgctcgaagctatgtgtgctcactctctatctg 80
||||| |||||||||||||||||| |||||||||
Sbjct: 55 atgctagaagctatgtgtgctcaccctctatctg 88
>54768_vvi-miR156c:pmrd
Length = 104
Score = 48.1 bits (24), Expect = 9e-07
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacccatggtcttttcctgcat 36
||||||||||||||||| |||||||| ||| |||||
Sbjct: 14 cagaagagagtgagcacacatggtctgttcttgcat 49
>48248_ath-miRf11148-akr:pmrd
Length = 96
Score = 44.1 bits (22), Expect = 1e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 47 atgctcgaagctatgtgtgctcactctctatctg 80
||||| ||||||||||||||| ||||||| ||||
Sbjct: 37 atgcttgaagctatgtgtgcttactctctctctg 4
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1 cagaagagagtgagcacccatggt 24
||||||||||||||||| ||||||
Sbjct: 93 cagaagagagtgagcacacatggt 70
>46914_ath-miR156e:pmrd
Length = 107
Score = 44.1 bits (22), Expect = 1e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 47 atgctcgaagctatgtgtgctcactctctatctg 80
||||| ||||||||||||||| ||||||| ||||
Sbjct: 66 atgcttgaagctatgtgtgcttactctctctctg 99
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacccatggt 24
||||||||||||||||| ||||||
Sbjct: 10 cagaagagagtgagcacacatggt 33
>54927_zma-miR156r:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 47 atgctcgaagctatgtgtgctcact 71
||||||||||||||| |||||||||
Sbjct: 62 atgctcgaagctatgcgtgctcact 86
>54924_zma-miR156o:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 47 atgctcgaagctatgtgtgctcact 71
||||||||||||||| |||||||||
Sbjct: 62 atgctcgaagctatgcgtgctcact 86
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacccatggt 24
||||||||||||||||| ||||||
Sbjct: 4 cagaagagagtgagcacacatggt 27
>54913_zma-miR156c:pmrd
Length = 139
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 47 atgctcgaagctatgtgtgctcact 71
||||||||||||||| |||||||||
Sbjct: 82 atgctcgaagctatgcgtgctcact 106
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacccatggt 24
||||||||||||||||| ||||||
Sbjct: 24 cagaagagagtgagcacacatggt 47
>54395_sbi-miR156c:pmrd
Length = 95
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 47 atgctcgaagctatgtgtgctcact 71
||||||||||||||| |||||||||
Sbjct: 58 atgctcgaagctatgcgtgctcact 82
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacccatggt 24
||||||||||||||||| ||||||
Sbjct: 4 cagaagagagtgagcacacatggt 27
>51354_ppr-miR156:pmrd
Length = 103
Score = 42.1 bits (21), Expect = 6e-05
Identities = 34/37 (91%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacccatggt-cttttcctgcat 36
||||||||||||||||| |||||| |||||| |||||
Sbjct: 5 cagaagagagtgagcacacatggtgcttttcttgcat 41
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 47 atgctcgaagctatgtgtgctcact 71
||||| |||||||||||||||||||
Sbjct: 65 atgcttgaagctatgtgtgctcact 89
>48803_osa-miR156c:pmrd
Length = 149
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 47 atgctcgaagctatgtgtgctcact 71
||||| |||||||||||||||||||
Sbjct: 82 atgcttgaagctatgtgtgctcact 106
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacccatggt 24
||||||||||||||||| ||||||
Sbjct: 32 cagaagagagtgagcacacatggt 55
>48795_oru-miR156:pmrd
Length = 93
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 47 atgctcgaagctatgtgtgctcact 71
||||| |||||||||||||||||||
Sbjct: 55 atgcttgaagctatgtgtgctcact 79
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacccatggt 24
||||||||||||||||| ||||||
Sbjct: 5 cagaagagagtgagcacacatggt 28
>48814_osa-miR156n:pmrd
Length = 97
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcaccc 19
|||||||||||||||||||
Sbjct: 4 cagaagagagtgagcaccc 22
>46916_ath-miR156g:pmrd
Length = 103
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacccatgg 23
||||||||||||||||| |||||
Sbjct: 14 cagaagagagtgagcacacatgg 36
