miRNEST 2.0, an integrative microRNA resource :: BLAST
>51602_ptc-miR159a:pmrd
Length = 183
Score = 309 bits (156), Expect = 3e-85
Identities = 159/160 (99%)
Strand = Plus / Plus
Query: 4 gctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggatcc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 gctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggatcc 74
Query: 64 acagccctatctatcaactgaaggataggtttgcggcttgcatatctcaggagctttatt 123
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 acagtcctatctatcaactgaaggataggtttgcggcttgcatatctcaggagctttatt 134
Query: 124 gcctaatgttagatccctttttggattgaagggagctcta 163
||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 gcctaatgttagatccctttttggattgaagggagctcta 174
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 301 bits (152), Expect = 9e-83
Identities = 158/160 (98%)
Strand = Plus / Plus
Query: 4 gctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggatcc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 gctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggatcc 69
Query: 64 acagccctatctatcaactgaaggataggtttgcggcttgcatatctcaggagctttatt 123
|||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 acagtcctatctatcaaccgaaggataggtttgcggcttgcatatctcaggagctttatt 129
Query: 124 gcctaatgttagatccctttttggattgaagggagctcta 163
||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 gcctaatgttagatccctttttggattgaagggagctcta 169
>51604_ptc-miR159c:pmrd
Length = 183
Score = 301 bits (152), Expect = 9e-83
Identities = 158/160 (98%)
Strand = Plus / Plus
Query: 4 gctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggatcc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 gctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggatcc 74
Query: 64 acagccctatctatcaactgaaggataggtttgcggcttgcatatctcaggagctttatt 123
|||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 acagtcctatctatcaaccgaaggataggtttgcggcttgcatatctcaggagctttatt 134
Query: 124 gcctaatgttagatccctttttggattgaagggagctcta 163
||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 gcctaatgttagatccctttttggattgaagggagctcta 174
>51603_ptc-miR159b:pmrd
Length = 187
Score = 113 bits (57), Expect = 4e-26
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 95 tgcggcttgcatatctcaggagctttattgcctaatgttagatccctttttggattgaag 154
||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 110 tgcggcttgcatatctcaggagctttattacctaatgttagatctttttttggattgaag 169
Query: 155 ggagctcta 163
|||||||||
Sbjct: 170 ggagctcta 178
>54777_vvi-miR159c:pmrd
Length = 190
Score = 79.8 bits (40), Expect = 6e-16
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 4 gctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggat-c 62
|||||||||||||||||||||| |||| ||||||||||| ||||||| | ||||||| |
Sbjct: 13 gctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggatcc 72
Query: 63 cacagccctatc 74
||||||||||||
Sbjct: 73 cacagccctatc 84
>54378_pvu-miR159:pmrd
Length = 174
Score = 71.9 bits (36), Expect = 1e-13
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 4 gctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggatcc 63
||||||||||||||||| |||| |||| |||||| |||| ||||||| ||||||||||||
Sbjct: 6 gctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatggatcc 65
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 143 tttggattgaagggagctcta 163
|||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctcta 173
>54377_pvu-miR159:pmrd
Length = 174
Score = 71.9 bits (36), Expect = 1e-13
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 4 gctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggatcc 63
||||||||||||||||| |||| |||| |||||| |||| ||||||| ||||||||||||
Sbjct: 6 gctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatggatcc 65
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 143 tttggattgaagggagctcta 163
|||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctcta 173
>48539_gma-miR159a:pmrd
Length = 214
Score = 63.9 bits (32), Expect = 3e-11
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 4 gctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggatcc 63
||||||||||||||||| |||| |||| |||||| ||| ||||||| ||||||||||||
Sbjct: 25 gctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatggatcc 84
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 143 tttggattgaagggagctcta 163
|||||||||||||||||||||
Sbjct: 175 tttggattgaagggagctcta 195
>54540_sly-miR159:pmrd
Length = 177
Score = 48.1 bits (24), Expect = 2e-06
Identities = 66/79 (83%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 87 gataggtttgcggcttgcatatctcaggagctttattg--cctaatgttagatccctttt 144
||||||||| || |||||||| |||||||||||||| || |||| |||| ||||
Sbjct: 99 gataggttttgggtttgcatatgtcaggagctttattttaccctttgtttgatcattttt 158
Query: 145 tggattgaagggagctcta 163
|||||||||||||||||||
Sbjct: 159 tggattgaagggagctcta 177
>54674_tae-miR159b:pmrd
Length = 255
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 138 ccctttttggattgaagggagctct 162
|||| ||||||||||||||||||||
Sbjct: 225 ccctctttggattgaagggagctct 249
>48825_osa-miR159m:pmrd
Length = 249
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 138 ccctttttggattgaagggagctct 162
|||| ||||||||||||||||||||
Sbjct: 224 ccctctttggattgaagggagctct 248
>48819_osa-miR159a:pmrd
Length = 272
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 138 ccctttttggattgaagggagctct 162
|||| ||||||||||||||||||||
Sbjct: 237 ccctctttggattgaagggagctct 261
>48796_oru-miR159:pmrd
Length = 274
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 138 ccctttttggattgaagggagctct 162
|||| ||||||||||||||||||||
Sbjct: 237 ccctctttggattgaagggagctct 261
>48701_mtr-miR159c:pmrd
Length = 44
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 143 tttggattgaagggagctcta 163
|||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctcta 21
>48699_mtr-miR159a:pmrd
Length = 168
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 143 tttggattgaagggagctcta 163
|||||||||||||||||||||
Sbjct: 148 tttggattgaagggagctcta 168
>48686_ltu-miR159:pmrd
Length = 345
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 143 tttggattgaagggagctcta 163
|||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctcta 21
>48395_bra-miR159a:pmrd
Length = 185
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 143 tttggattgaagggagctcta 163
|||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctcta 183
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 98 ggcttgcatatctcaggagcttta 121
||||| ||||||||||||||||||
Sbjct: 111 ggcttacatatctcaggagcttta 134
>48339_bna-miR159:pmrd
Length = 183
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 143 tttggattgaagggagctcta 163
|||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctcta 181
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 98 ggcttgcatatctcaggagcttta 121
||||| ||||||||||||||||||
Sbjct: 109 ggcttacatatctcaggagcttta 132
>46932_ath-miR159b:pmrd
Length = 196
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 43 aagctgctaagctatggatcc 63
|||||||||||||||||||||
Sbjct: 47 aagctgctaagctatggatcc 67
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 143 tttggattgaagggagctct 162
||||||||||||||||||||
Sbjct: 168 tttggattgaagggagctct 187
>46931_ath-miR159a:pmrd
Length = 184
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 43 aagctgctaagctatggatcc 63
|||||||||||||||||||||
Sbjct: 46 aagctgctaagctatggatcc 66
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 101 ttgcatatctcaggagcttta 121
|||||||||||||||||||||
Sbjct: 114 ttgcatatctcaggagcttta 134
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 143 tttggattgaagggagctcta 163
|||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctcta 183
