miRNEST 2.0, an integrative microRNA resource :: BLAST
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 65.9 bits (33), Expect = 9e-12
Identities = 65/73 (89%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaaaagaggat-ttgcagggtaaatcaagctgctaatctatgga 59
||||||||||||||||||| ||||| | |||| ||||| || |||||||||| |||||||
Sbjct: 7 ggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgga 66
Query: 60 ttccacagtccta 72
||||||||||||
Sbjct: 67 -tccacagtccta 78
Score = 46.1 bits (23), Expect = 8e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 92 ggataggcttgcggcttgcatatgttaggagcttt 126
||||||| ||||||||||||||| | |||||||||
Sbjct: 92 ggataggtttgcggcttgcatatctcaggagcttt 126
>51604_ptc-miR159c:pmrd
Length = 183
Score = 65.9 bits (33), Expect = 9e-12
Identities = 65/73 (89%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaaaagaggat-ttgcagggtaaatcaagctgctaatctatgga 59
||||||||||||||||||| ||||| | |||| ||||| || |||||||||| |||||||
Sbjct: 12 ggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgga 71
Query: 60 ttccacagtccta 72
||||||||||||
Sbjct: 72 -tccacagtccta 83
Score = 46.1 bits (23), Expect = 8e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 92 ggataggcttgcggcttgcatatgttaggagcttt 126
||||||| ||||||||||||||| | |||||||||
Sbjct: 97 ggataggtttgcggcttgcatatctcaggagcttt 131
>51602_ptc-miR159a:pmrd
Length = 183
Score = 65.9 bits (33), Expect = 9e-12
Identities = 65/73 (89%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaaaagaggat-ttgcagggtaaatcaagctgctaatctatgga 59
||||||||||||||||||| ||||| | |||| ||||| || |||||||||| |||||||
Sbjct: 12 ggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgga 71
Query: 60 ttccacagtccta 72
||||||||||||
Sbjct: 72 -tccacagtccta 83
Score = 46.1 bits (23), Expect = 8e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 92 ggataggcttgcggcttgcatatgttaggagcttt 126
||||||| ||||||||||||||| | |||||||||
Sbjct: 97 ggataggtttgcggcttgcatatctcaggagcttt 131
>54540_sly-miR159:pmrd
Length = 177
Score = 60.0 bits (30), Expect = 6e-10
Identities = 58/65 (89%), Gaps = 3/65 (4%)
Strand = Plus / Plus
Query: 107 ttgcatatgttaggagcttt--tttacctctttgttttatctttctttggattgaaggga 164
|||||||||| ||||||||| |||||| |||||||| ||| || |||||||||||||||
Sbjct: 113 ttgcatatgtcaggagctttattttacc-ctttgtttgatcattttttggattgaaggga 171
Query: 165 gctct 169
|||||
Sbjct: 172 gctct 176
>51603_ptc-miR159b:pmrd
Length = 187
Score = 58.0 bits (29), Expect = 2e-09
Identities = 60/69 (86%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 101 tgcggcttgcatatgttaggagcttttttacctctttgttttatctttctttggattgaa 160
|||||||||||||| | ||||||||| |||||| | ||| |||||| |||||||||||
Sbjct: 110 tgcggcttgcatatctcaggagctttattacctaat-gttagatctttttttggattgaa 168
Query: 161 gggagctct 169
|||||||||
Sbjct: 169 gggagctct 177
>48699_mtr-miR159a:pmrd
Length = 168
Score = 56.0 bits (28), Expect = 9e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 138 gttttatctttctttggattgaagggagctct 169
|||| |||||||||||||||||||||||||||
Sbjct: 136 gtttaatctttctttggattgaagggagctct 167
>54378_pvu-miR159:pmrd
Length = 174
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 147 ttctttggattgaagggagctct 169
|||||||||||||||||||||||
Sbjct: 150 ttctttggattgaagggagctct 172
>54377_pvu-miR159:pmrd
Length = 174
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 147 ttctttggattgaagggagctct 169
|||||||||||||||||||||||
Sbjct: 150 ttctttggattgaagggagctct 172
>48539_gma-miR159a:pmrd
Length = 214
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 147 ttctttggattgaagggagctct 169
|||||||||||||||||||||||
Sbjct: 172 ttctttggattgaagggagctct 194
Score = 42.1 bits (21), Expect = 1e-04
Identities = 58/69 (84%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaaaagaggat-ttgcagggtaaatcaagctgctaatctatgga 59
||||||||||||||||||| |||||| || | |||| ||| ||||||| | |||||||
Sbjct: 22 ggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatgga 81
Query: 60 ttccacagt 68
| |||||||
Sbjct: 82 tcccacagt 90
>48395_bra-miR159a:pmrd
Length = 185
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 147 ttctttggattgaagggagctct 169
|||||||||||||||||||||||
Sbjct: 160 ttctttggattgaagggagctct 182
>48339_bna-miR159:pmrd
Length = 183
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 147 ttctttggattgaagggagctct 169
|||||||||||||||||||||||
Sbjct: 158 ttctttggattgaagggagctct 180
>46932_ath-miR159b:pmrd
Length = 196
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 147 ttctttggattgaagggagctct 169
|||||||||||||||||||||||
Sbjct: 165 ttctttggattgaagggagctct 187
>46931_ath-miR159a:pmrd
Length = 184
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 147 ttctttggattgaagggagctct 169
|||||||||||||||||||||||
Sbjct: 160 ttctttggattgaagggagctct 182
>54930_zma-miR159a:pmrd
Length = 246
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 tctttggattgaagggagctct 169
||||||||||||||||||||||
Sbjct: 205 tctttggattgaagggagctct 226
>54674_tae-miR159b:pmrd
Length = 255
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 tctttggattgaagggagctct 169
||||||||||||||||||||||
Sbjct: 228 tctttggattgaagggagctct 249
>54631_sof-miR159d:pmrd
Length = 265
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 tctttggattgaagggagctct 169
||||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctct 245
>54629_sof-miR159b:pmrd
Length = 266
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 tctttggattgaagggagctct 169
||||||||||||||||||||||
Sbjct: 225 tctttggattgaagggagctct 246
>54628_sof-miR159a:pmrd
Length = 265
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 tctttggattgaagggagctct 169
||||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctct 245
>54392_sar-miR159:pmrd
Length = 175
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 tctttggattgaagggagctct 169
||||||||||||||||||||||
Sbjct: 153 tctttggattgaagggagctct 174
>51338_pgl-miR159:pmrd
Length = 226
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 tctttggattgaagggagctct 169
||||||||||||||||||||||
Sbjct: 204 tctttggattgaagggagctct 225
>48825_osa-miR159m:pmrd
Length = 249
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 tctttggattgaagggagctct 169
||||||||||||||||||||||
Sbjct: 227 tctttggattgaagggagctct 248
>48820_osa-miR159b:pmrd
Length = 188
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 tctttggattgaagggagctct 169
||||||||||||||||||||||
Sbjct: 156 tctttggattgaagggagctct 177
>48819_osa-miR159a:pmrd
Length = 272
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 tctttggattgaagggagctct 169
||||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctct 261
>48796_oru-miR159:pmrd
Length = 274
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 148 tctttggattgaagggagctct 169
||||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctct 261
