miRNEST 2.0, an integrative microRNA resource :: BLAST
>54540_sly-miR159:pmrd
Length = 177
Score = 329 bits (166), Expect = 4e-91
Identities = 173/174 (99%), Gaps = 1/174 (0%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatggat 60
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Sbjct: 3 gagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatggat 62
Query: 61 tcctcagccctatctatttatgatttcaaacatatagataggtttgtgggtttgcatatg 120
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Sbjct: 63 tcctcagccctatctatttatgatttcaaacatatagataggttt-tgggtttgcatatg 121
Query: 121 tcaggagctttattttaccctttgtttgatcattttttggattgaagggagctc 174
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Sbjct: 122 tcaggagctttattttaccctttgtttgatcattttttggattgaagggagctc 175
>51603_ptc-miR159b:pmrd
Length = 187
Score = 56.0 bits (28), Expect = 9e-09
Identities = 55/63 (87%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 112 ttgcatatgtcaggagctttattttaccctttgtttgatcattttttggattgaagggag 171
|||||||| |||||||||||||| ||| |||| |||| |||||||||||||||||||
Sbjct: 116 ttgcatatctcaggagctttatt--acctaatgttagatctttttttggattgaagggag 173
Query: 172 ctc 174
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Sbjct: 174 ctc 176
>54777_vvi-miR159c:pmrd
Length = 190
Score = 52.0 bits (26), Expect = 1e-07
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatggat 60
|||||||||||||||||| | | ||| || || || |||||||||||||| |||||||
Sbjct: 11 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 70
Query: 61 tcctcagccctatc 74
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Sbjct: 71 cccacagccctatc 84
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 154 tttttggattgaagggagctc 174
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Sbjct: 147 tttttggattgaagggagctc 167
>51604_ptc-miR159c:pmrd
Length = 183
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 154 tttttggattgaagggagctc 174
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Sbjct: 152 tttttggattgaagggagctc 172
>51602_ptc-miR159a:pmrd
Length = 183
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 154 tttttggattgaagggagctc 174
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Sbjct: 152 tttttggattgaagggagctc 172
>51562_pta-miR319:pmrd
Length = 206
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 151 cattttttggattgaagggagctc 174
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Sbjct: 32 catttcttggattgaagggagctc 9
>51553_pta-miR159a:pmrd
Length = 210
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 151 cattttttggattgaagggagctc 174
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Sbjct: 179 catttcttggattgaagggagctc 202
