miRNEST 2.0, an integrative microRNA resource :: BLAST
>48560_gma-miR168:pmrd
Length = 125
Score = 119 bits (60), Expect = 3e-28
Identities = 81/88 (92%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaacctgtttttgcgcgaaatggtggagtggttgccggcggc 60
||||||||||||||||||||||| ||||| ||||| ||||| |||| ||| ||||||| |
Sbjct: 19 tcgcttggtgcaggtcgggaaccggttttcgcgcggaatggaggagcggtcgccggcgcc 78
Query: 61 gaattggatcccgccttgcatcaactga 88
||||||||||||||||||||||||||||
Sbjct: 79 gaattggatcccgccttgcatcaactga 106
>54375_pts-miR168b:pmrd
Length = 140
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 59 gcgaattggatcccgccttgcatcaactga 88
||||||||||||||||||||||||||||||
Sbjct: 111 gcgaattggatcccgccttgcatcaactga 140
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
>51650_ptc-miR168a:pmrd
Length = 160
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 59 gcgaattggatcccgccttgcatcaactga 88
||||||||||||||||||||||||||||||
Sbjct: 123 gcgaattggatcccgccttgcatcaactga 152
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 11 tcgcttggtgcaggtcgggaac 32
>54388_rco-miR168:pmrd
Length = 156
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 61 gaattggatcccgccttgcatcaactga 88
||||||||||||||||||||||||||||
Sbjct: 110 gaattggatcccgccttgcatcaactga 137
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 19 tcgcttggtgcaggtcgggaac 40
>54374_pts-miR168a:pmrd
Length = 118
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 61 gaattggatcccgccttgcatcaactga 88
||||||||||||||||||||||||||||
Sbjct: 91 gaattggatcccgccttgcatcaactga 118
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
>54366_ptr-miR168:pmrd
Length = 118
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 61 gaattggatcccgccttgcatcaactga 88
||||||||||||||||||||||||||||
Sbjct: 91 gaattggatcccgccttgcatcaactga 118
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
>51651_ptc-miR168b:pmrd
Length = 136
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 61 gaattggatcccgccttgcatcaactga 88
||||||||||||||||||||||||||||
Sbjct: 101 gaattggatcccgccttgcatcaactga 128
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 11 tcgcttggtgcaggtcgggaac 32
>47339_ath-miRf10239-akr:pmrd
Length = 129
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 63 attggatcccgccttgcatcaactga 88
||||||||||||||||||||||||||
Sbjct: 91 attggatcccgccttgcatcaactga 116
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaacc 23
|||||||||||||||||||||||
Sbjct: 13 tcgcttggtgcaggtcgggaacc 35
>46959_ath-miR168m:pmrd
Length = 104
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 63 attggatcccgccttgcatcaactga 88
||||||||||||||||||||||||||
Sbjct: 79 attggatcccgccttgcatcaactga 104
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaacc 23
|||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaacc 23
>46957_ath-miR168a:pmrd
Length = 138
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 63 attggatcccgccttgcatcaactga 88
||||||||||||||||||||||||||
Sbjct: 96 attggatcccgccttgcatcaactga 121
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaacc 23
|||||||||||||||||||||||
Sbjct: 18 tcgcttggtgcaggtcgggaacc 40
>54802_vvi-miR168:pmrd
Length = 132
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaacc 23
|||||||||||||||||||||||
Sbjct: 11 tcgcttggtgcaggtcgggaacc 33
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 67 gatcccgccttgcatcaactga 88
||||||||||||||||||||||
Sbjct: 99 gatcccgccttgcatcaactga 120
>48649_hte-miR168:pmrd
Length = 140
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
>48349_bna-miR168:pmrd
Length = 133
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 18 tcgcttggtgcaggtcgggaac 39
>46958_ath-miR168b:pmrd
Length = 124
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 19 tcgcttggtgcaggtcgggaac 40
>54665_stu-miR168:pmrd
Length = 133
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 64 ttggatcccgccttgcatcaactga 88
|||| ||||||||||||||||||||
Sbjct: 109 ttgggtcccgccttgcatcaactga 133
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggga 20
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>54546_sly-miR168:pmrd
Length = 145
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggga 20
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
