miRNEST 2.0, an integrative microRNA resource :: BLAST
>51603_ptc-miR159b:pmrd
Length = 187
Score = 127 bits (64), Expect = 3e-30
Identities = 148/173 (85%), Gaps = 6/173 (3%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgg 60
|||||||||||||||||||||||| | || || ||||||||| ||||||||||||||||
Sbjct: 11 tggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatga 70
Query: 61 atcccacagccctataagca-gagattataattttggataggcttgtggcttgcatatct 119
||||||||||||||| | || || | ||||| ||| ||| || |||||||||||||
Sbjct: 71 atcccacagccctatcaccatcag----tcatttt-gatgggcctgcggcttgcatatct 125
Query: 120 caggagcttcattaccttgtattagatccttgtttggattgaagggagctcta 172
||||||||| ||||||| | ||||||| || |||||||||||||||||||||
Sbjct: 126 caggagctttattacctaatgttagatctttttttggattgaagggagctcta 178
>54777_vvi-miR159c:pmrd
Length = 190
Score = 121 bits (61), Expect = 2e-28
Identities = 147/173 (84%), Gaps = 2/173 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgg 60
|||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||
Sbjct: 9 tggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgg 68
Query: 61 atcccacagccctataagcagagattataattttggataggcttgtggcttgcatatctc 120
||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 69 atcccacagccctatcccgtcaatggggggcattggataggcttgtggcttgcatatctc 128
Query: 121 aggagcttcatta-ccttgtattagatccttgtttggattgaagggagctcta 172
||||||| ||||| || || ||||||||||||||||||||||||||||||||
Sbjct: 129 aggagctgcattatccaagt-ttagatccttgtttggattgaagggagctcta 180
>54378_pvu-miR159:pmrd
Length = 174
Score = 97.6 bits (49), Expect = 3e-21
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgg 60
||||||||||||||||||||| ||||||||| ||||| |||||||||||| ||||||||
Sbjct: 2 tggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgg 61
Query: 61 atcccacag 69
|||||||||
Sbjct: 62 atcccacag 70
>54377_pvu-miR159:pmrd
Length = 174
Score = 97.6 bits (49), Expect = 3e-21
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgg 60
||||||||||||||||||||| ||||||||| ||||| |||||||||||| ||||||||
Sbjct: 2 tggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgg 61
Query: 61 atcccacag 69
|||||||||
Sbjct: 62 atcccacag 70
>51602_ptc-miR159a:pmrd
Length = 183
Score = 97.6 bits (49), Expect = 3e-21
Identities = 143/172 (83%), Gaps = 8/172 (4%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgg 60
|||||||||||||||||||||||||| ||||| |||||||||| ||||||| ||||||||
Sbjct: 11 tggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgg 70
Query: 61 atcccacagccctataagcagagattataattttggataggcttgtggcttgcatatctc 120
|| |||||| ||||| || | | | ||||||| ||| ||||||||||||||
Sbjct: 71 at-ccacagtcctat------ctatca-actgaaggataggtttgcggcttgcatatctc 122
Query: 121 aggagcttcattaccttgtattagatccttgtttggattgaagggagctcta 172
|||||||| ||| ||| | |||||||| | |||||||||||||||||||||
Sbjct: 123 aggagctttattgcctaatgttagatccctttttggattgaagggagctcta 174
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 95.6 bits (48), Expect = 1e-20
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgg 60
|||||||||||||||||||||||||| ||||| |||||||||| ||||||| ||||||||
Sbjct: 6 tggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgg 65
Query: 61 atcc 64
||||
Sbjct: 66 atcc 69
>51604_ptc-miR159c:pmrd
Length = 183
Score = 95.6 bits (48), Expect = 1e-20
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgg 60
|||||||||||||||||||||||||| ||||| |||||||||| ||||||| ||||||||
Sbjct: 11 tggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgg 70
Query: 61 atcc 64
||||
Sbjct: 71 atcc 74
>48539_gma-miR159a:pmrd
Length = 214
Score = 89.7 bits (45), Expect = 6e-19
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgg 60
||||||||||||||||||||| ||||||||| ||||| ||||||||||| ||||||||
Sbjct: 21 tggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatgg 80
Query: 61 atcccacag 69
|||||||||
Sbjct: 81 atcccacag 89
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 147 ccttgtttggattgaagggagctcta 172
|||| |||||||||||||||||||||
Sbjct: 170 ccttctttggattgaagggagctcta 195
>54540_sly-miR159:pmrd
Length = 177
Score = 46.1 bits (23), Expect = 9e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 41 attgagctgctgagctatggatcccacagccctat 75
||||||||||||| |||||||| || |||||||||
Sbjct: 41 attgagctgctgacctatggattcctcagccctat 75
Score = 44.1 bits (22), Expect = 3e-05
Identities = 55/65 (84%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 110 ttgcatatctcaggagcttcatt--accttgtattagatccttgtttggattgaagggag 167
|||||||| |||||||||| ||| ||| | | || |||| || ||||||||||||||||
Sbjct: 113 ttgcatatgtcaggagctttattttaccctttgtttgatcattttttggattgaagggag 172
Query: 168 ctcta 172
|||||
Sbjct: 173 ctcta 177
>54931_zma-miR159b:pmrd
Length = 221
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 150 tgtttggattgaagggagctct 171
||||||||||||||||||||||
Sbjct: 180 tgtttggattgaagggagctct 201
>54673_tae-miR159a:pmrd
Length = 177
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 150 tgtttggattgaagggagctct 171
||||||||||||||||||||||
Sbjct: 152 tgtttggattgaagggagctct 173
>48657_hvv-miR159b:pmrd
Length = 174
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 150 tgtttggattgaagggagctct 171
||||||||||||||||||||||
Sbjct: 152 tgtttggattgaagggagctct 173
>48701_mtr-miR159c:pmrd
Length = 44
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 152 tttggattgaagggagctcta 172
|||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctcta 21
>48699_mtr-miR159a:pmrd
Length = 168
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 152 tttggattgaagggagctcta 172
|||||||||||||||||||||
Sbjct: 148 tttggattgaagggagctcta 168
>48686_ltu-miR159:pmrd
Length = 345
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 152 tttggattgaagggagctcta 172
|||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctcta 21
>48395_bra-miR159a:pmrd
Length = 185
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 152 tttggattgaagggagctcta 172
|||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctcta 183
>48339_bna-miR159:pmrd
Length = 183
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 152 tttggattgaagggagctcta 172
|||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctcta 181
>46931_ath-miR159a:pmrd
Length = 184
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 152 tttggattgaagggagctcta 172
|||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctcta 183
