miRNEST 2.0, an integrative microRNA resource :: BLAST
>51599_ptc-miR156i:pmrd
Length = 99
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 51 tcactcctttgtgctctctatgcttctg 78
||||||||||||||||||||||||||||
Sbjct: 61 tcactcctttgtgctctctatgcttctg 88
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatg 25
|||||||||||||||||||||||||
Sbjct: 15 cagaagatagagagcacagatgatg 39
>48695_mtr-miR156e:pmrd
Length = 172
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 51 tcactcctttgtgctctctatgcttctg 78
||||||||||||||||||||||||||||
Sbjct: 137 tcactcctttgtgctctctatgcttctg 164
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgat 27
|||||||||||||||||||||||||||
Sbjct: 10 cagaagatagagagcacagatgatgat 36
>46862_aqc-miR156b:pmrd
Length = 83
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 51 tcactcctttgtgctctctatgcttctg 78
||||||||||||||||||||||||||||
Sbjct: 51 tcactcctttgtgctctctatgcttctg 78
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgat 27
|||||||||||||||||||||||||||
Sbjct: 4 cagaagatagagagcacagatgatgat 30
>54772_vvi-miR156g:pmrd
Length = 103
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgat 27
|||||||||||||||||||||||||||
Sbjct: 15 cagaagatagagagcacagatgatgat 41
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 tcactcctttgtgctctcta 70
||||||||||||||||||||
Sbjct: 60 tcactcctttgtgctctcta 79
>52045_ptc-miRf10223-akr:pmrd
Length = 86
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgat 27
|||||||||||||||||||||||||||
Sbjct: 7 cagaagatagagagcacagatgatgat 33
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 52 cactcctttgtgctctctatgcttctg 78
|||||||||||||||||||||||||||
Sbjct: 54 cactcctttgtgctctctatgcttctg 80
>51600_ptc-miR156j:pmrd
Length = 100
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgat 27
|||||||||||||||||||||||||||
Sbjct: 15 cagaagatagagagcacagatgatgat 41
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 52 cactcctttgtgctctctatgcttctg 78
|||||||||||||||||||||||||||
Sbjct: 62 cactcctttgtgctctctatgcttctg 88
>48790_nta-miR157:pmrd
Length = 131
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgat 27
|||||||||||||||||||||||||||
Sbjct: 5 cagaagatagagagcacagatgatgat 31
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 58 tttgtgctctctatgcttc 76
|||||||||||||||||||
Sbjct: 107 tttgtgctctctatgcttc 125
>48642_han-miR157a:pmrd
Length = 86
Score = 54.0 bits (27), Expect = 1e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 48 aattcactcctttgtgctctctatgcttctg 78
|||||||||||| ||||||||||||||||||
Sbjct: 52 aattcactccttcgtgctctctatgcttctg 82
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacaga 20
||||||||||||||||||||
Sbjct: 5 cagaagatagagagcacaga 24
>48631_gra-miR157b:pmrd
Length = 91
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 52 cactcctttgtgctctctatgcttctg 78
|||||||||||||||||||||||||||
Sbjct: 57 cactcctttgtgctctctatgcttctg 83
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatg 25
|||||||||||||||||||||||||
Sbjct: 9 cagaagatagagagcacagatgatg 33
>48531_gma-miR156d:pmrd
Length = 151
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgat 27
|||||||||||||||||||||||||||
Sbjct: 25 cagaagatagagagcacagatgatgat 51
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 53 actcctttgtgctctctatgcttctg 78
||||||||||||||||||| ||||||
Sbjct: 103 actcctttgtgctctctatacttctg 128
>54774_vvi-miR156i:pmrd
Length = 103
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatga 26
||||||||||||||||||||||||||
Sbjct: 15 cagaagatagagagcacagatgatga 40
Score = 48.1 bits (24), Expect = 9e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 51 tcactcctttgtgctctctatgcttctg 78
||||||||||||||||||||| ||||||
Sbjct: 60 tcactcctttgtgctctctattcttctg 87
>51597_ptc-miR156g:pmrd
Length = 103
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatga 26
||||||||||||||||||||||||||
Sbjct: 15 cagaagatagagagcacagatgatga 40
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 tcactcctttgtgctctcta 70
||||||||||||||||||||
Sbjct: 64 tcactcctttgtgctctcta 83
>48697_mtr-miR156h:pmrd
Length = 94
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatga 26
||||||||||||||||||||||||||
Sbjct: 10 cagaagatagagagcacagatgatga 35
>46924_ath-miR157a:pmrd
Length = 98
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatga 26
||||||||||||||||||||||||||
Sbjct: 8 cagaagatagagagcacagatgatga 33
>48630_gra-miR157a:pmrd
Length = 101
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatg 25
|||||||||||||||||||||||||
Sbjct: 9 cagaagatagagagcacagatgatg 33
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 52 cactcctttgtgctctctatgcttctg 78
|||||||||||||||| ||||||||||
Sbjct: 67 cactcctttgtgctctttatgcttctg 93
>46925_ath-miR157b:pmrd
Length = 132
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgat 24
||||||||||||||||||||||||
Sbjct: 23 cagaagatagagagcacagatgat 46
>46861_aqc-miR156a:pmrd
Length = 81
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatga 23
|||||||||||||||||||||||
Sbjct: 4 cagaagatagagagcacagatga 26
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 57 ctttgtgctctctatgcttctg 78
||||||||||||||||||||||
Sbjct: 55 ctttgtgctctctatgcttctg 76
>48537_gma-miR157c:pmrd
Length = 84
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1 cagaagatagagagcacagatgatga 26
||||||||||||||||| ||||||||
Sbjct: 80 cagaagatagagagcactgatgatga 55
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 51 tcactcctttgtgctctcta 70
||||||||||||||||||||
Sbjct: 31 tcactcctttgtgctctcta 12
>48532_gma-miR156e:pmrd
Length = 124
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatga 26
||||||||||||||||| ||||||||
Sbjct: 25 cagaagatagagagcactgatgatga 50
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 tcactcctttgtgctctcta 70
||||||||||||||||||||
Sbjct: 74 tcactcctttgtgctctcta 93
>54661_stu-miR157a:pmrd
Length = 91
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tttgtgctctctatgcttctg 78
|||||||||||||||||||||
Sbjct: 67 tttgtgctctctatgcttctg 87
Score = 38.2 bits (19), Expect = 9e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgat 27
||||||||||||||||| ||||||||
Sbjct: 5 cagaagatagagagcactaatgatgat 31
>54532_sly-miR156a:pmrd
Length = 100
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tttgtgctctctatgcttctg 78
|||||||||||||||||||||
Sbjct: 76 tttgtgctctctatgcttctg 96
Score = 38.2 bits (19), Expect = 9e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgat 27
||||||||||||||||| ||||||||
Sbjct: 5 cagaagatagagagcactaatgatgat 31
>54570_smo-miR156b:pmrd
Length = 112
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacaga 20
||||||||||||||||||||
Sbjct: 15 cagaagatagagagcacaga 34
>52807_ptc-miRf10985-akr:pmrd
Length = 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 tcactcctttgtgctctcta 70
||||||||||||||||||||
Sbjct: 55 tcactcctttgtgctctcta 74
>51598_ptc-miR156h:pmrd
Length = 103
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 tcactcctttgtgctctcta 70
||||||||||||||||||||
Sbjct: 64 tcactcctttgtgctctcta 83
>46927_ath-miR157d:pmrd
Length = 221
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 55 tcctttgtgctctctatgcttctg 78
|||| |||||||||||||||||||
Sbjct: 167 tcctatgtgctctctatgcttctg 190
