miRNEST 2.0, an integrative microRNA resource :: BLAST
>48493_ghr-miR162a:pmrd
Length = 148
Score = 101 bits (51), Expect = 8e-23
Identities = 83/91 (91%), Gaps = 2/91 (2%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatcactttgtgcaaattttgttgtgaaaaataacacaaaat 60
|||||||||||||||||||||| ||| || ||||||||||||| || ||||||||| |
Sbjct: 25 tggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaa-taacacaaa-t 82
Query: 61 acatgaatcgatcgataaacctctgcatcca 91
|||||||||||||||||||||||||||||||
Sbjct: 83 acatgaatcgatcgataaacctctgcatcca 113
>54387_rco-miR162:pmrd
Length = 96
Score = 79.8 bits (40), Expect = 3e-16
Identities = 81/92 (88%), Gaps = 2/92 (2%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatcactttgtgcaa-attttgttgtgaaaaataacacaaaa 59
|||||||||||||||||||||| ||| || || |||||||||||||| | || | ||||
Sbjct: 4 tggaggcagcggttcatcgatctcttcctggaagattttgttgtgaaacaaaa-ataaaa 62
Query: 60 tacatgaatcgatcgataaacctctgcatcca 91
||||||||||||||||||||||||||||||
Sbjct: 63 cgcatgaatcgatcgataaacctctgcatcca 94
>48423_cpa-miR162a:pmrd
Length = 109
Score = 67.9 bits (34), Expect = 1e-12
Identities = 78/91 (85%), Gaps = 5/91 (5%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatcactttgtgcaaattttgttgtgaaaaataacacaaaat 60
|||||||||||||||||||||| ||| || ||||| || ||||||||| ||| ||
Sbjct: 14 tggaggcagcggttcatcgatctcttcctgggaatttggt-gtgaaaaatcacagaa--- 69
Query: 61 acatgaatcgatcgataaacctctgcatcca 91
||||||||||||||||||||||||||||||
Sbjct: 70 -catgaatcgatcgataaacctctgcatcca 99
>48682_llu-miR162:pmrd
Length = 80
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 62 catgaatcgatcgataaacctctgcatcca 91
||||||||||||||||||||||||||||||
Sbjct: 50 catgaatcgatcgataaacctctgcatcca 79
>48545_gma-miR162a:pmrd
Length = 102
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 62 catgaatcgatcgataaacctctgcatcca 91
||||||||||||||||||||||||||||||
Sbjct: 63 catgaatcgatcgataaacctctgcatcca 92
>52400_ptc-miRf10578-akr:pmrd
Length = 103
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 61 acatgaatcgatcgataaacctctgcatcca 91
||||||| |||||||||||||||||||||||
Sbjct: 39 acatgaaccgatcgataaacctctgcatcca 9
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1 tggaggcagcggttcatcgatc 22
||||||||||||||||||||||
Sbjct: 94 tggaggcagcggttcatcgatc 73
>52399_ptc-miRf10577-akr:pmrd
Length = 103
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 61 acatgaatcgatcgataaacctctgcatcca 91
||||||| |||||||||||||||||||||||
Sbjct: 39 acatgaaccgatcgataaacctctgcatcca 9
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1 tggaggcagcggttcatcgatc 22
||||||||||||||||||||||
Sbjct: 94 tggaggcagcggttcatcgatc 73
>51616_ptc-miR162a:pmrd
Length = 107
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 61 acatgaatcgatcgataaacctctgcatcca 91
||||||| |||||||||||||||||||||||
Sbjct: 67 acatgaaccgatcgataaacctctgcatcca 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatc 22
||||||||||||||||||||||
Sbjct: 12 tggaggcagcggttcatcgatc 33
>48834_osa-miR162a:pmrd
Length = 171
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 65 gaatcgatcgataaacctctgcatcca 91
|||||||||||||||||||||||||||
Sbjct: 136 gaatcgatcgataaacctctgcatcca 162
>48707_mtr-miR162d:pmrd
Length = 87
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 61 acatgaatcgatcgataaacctctgcatcca 91
|||||||||| ||||||||||||||||||||
Sbjct: 56 acatgaatcggtcgataaacctctgcatcca 86
>48706_mtr-miR162c:pmrd
Length = 86
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 61 acatgaatcgatcgataaacctctgcatcca 91
|||||||||| ||||||||||||||||||||
Sbjct: 31 acatgaatcggtcgataaacctctgcatcca 1
>48705_mtr-miR162b:pmrd
Length = 85
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 61 acatgaatcgatcgataaacctctgcatcca 91
|||||||||| ||||||||||||||||||||
Sbjct: 55 acatgaatcggtcgataaacctctgcatcca 85
>47354_ath-miRf10254-akr:pmrd
Length = 115
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 65 gaatcgatcgataaacctctgcatcca 91
|||||||||||||||||||||||||||
Sbjct: 42 gaatcgatcgataaacctctgcatcca 16
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1 tggaggcagcggttcatcgatca 23
|||||||||||||||||||||||
Sbjct: 101 tggaggcagcggttcatcgatca 79
>46938_ath-miR162b:pmrd
Length = 111
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 65 gaatcgatcgataaacctctgcatcca 91
|||||||||||||||||||||||||||
Sbjct: 72 gaatcgatcgataaacctctgcatcca 98
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatca 23
|||||||||||||||||||||||
Sbjct: 13 tggaggcagcggttcatcgatca 35
>46937_ath-miR162a:pmrd
Length = 140
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 62 catgaatcgatcgataaacctctgcatcca 91
||||||| ||||||||||||||||||||||
Sbjct: 79 catgaatagatcgataaacctctgcatcca 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatc 22
||||||||||||||||||||||
Sbjct: 26 tggaggcagcggttcatcgatc 47
>54948_zma-miR162b:pmrd
Length = 130
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 65 gaatcgatcgataaacctctgcatcca 91
|||||| ||||||||||||||||||||
Sbjct: 103 gaatcggtcgataaacctctgcatcca 129
>54784_vvi-miR162:pmrd
Length = 103
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 65 gaatcgatcgataaacctctgcatcca 91
|||||| ||||||||||||||||||||
Sbjct: 66 gaatcggtcgataaacctctgcatcca 92
>54542_sly-miR162:pmrd
Length = 99
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 65 gaatcgatcgataaacctctgcatcca 91
|||||| ||||||||||||||||||||
Sbjct: 72 gaatcggtcgataaacctctgcatcca 98
>52498_ptc-miRf10676-akr:pmrd
Length = 101
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 69 cgatcgataaacctctgcatcca 91
|||||||||||||||||||||||
Sbjct: 30 cgatcgataaacctctgcatcca 8
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1 tggaggcagcggttcatcgatc 22
||||||||||||||||||||||
Sbjct: 93 tggaggcagcggttcatcgatc 72
>52497_ptc-miRf10675-akr:pmrd
Length = 105
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 69 cgatcgataaacctctgcatcca 91
|||||||||||||||||||||||
Sbjct: 32 cgatcgataaacctctgcatcca 10
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1 tggaggcagcggttcatcgatc 22
||||||||||||||||||||||
Sbjct: 95 tggaggcagcggttcatcgatc 74
>52244_ptc-miRf10422-akr:pmrd
Length = 105
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 69 cgatcgataaacctctgcatcca 91
|||||||||||||||||||||||
Sbjct: 32 cgatcgataaacctctgcatcca 10
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1 tggaggcagcggttcatcgatc 22
||||||||||||||||||||||
Sbjct: 95 tggaggcagcggttcatcgatc 74
>52243_ptc-miRf10421-akr:pmrd
Length = 101
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 69 cgatcgataaacctctgcatcca 91
|||||||||||||||||||||||
Sbjct: 30 cgatcgataaacctctgcatcca 8
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1 tggaggcagcggttcatcgatc 22
||||||||||||||||||||||
Sbjct: 93 tggaggcagcggttcatcgatc 72
>51618_ptc-miR162c:pmrd
Length = 107
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 69 cgatcgataaacctctgcatcca 91
|||||||||||||||||||||||
Sbjct: 75 cgatcgataaacctctgcatcca 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatc 22
||||||||||||||||||||||
Sbjct: 12 tggaggcagcggttcatcgatc 33
>51617_ptc-miR162b:pmrd
Length = 107
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 69 cgatcgataaacctctgcatcca 91
|||||||||||||||||||||||
Sbjct: 75 cgatcgataaacctctgcatcca 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatc 22
||||||||||||||||||||||
Sbjct: 12 tggaggcagcggttcatcgatc 33
>48836_osa-miR162m:pmrd
Length = 114
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 65 gaatcgatcgataaacctctgcatcca 91
|||||||||||||| ||||||||||||
Sbjct: 87 gaatcgatcgataagcctctgcatcca 113
>48835_osa-miR162b:pmrd
Length = 134
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 65 gaatcgatcgataaacctctgcatcca 91
|||||||||||||| ||||||||||||
Sbjct: 97 gaatcgatcgataagcctctgcatcca 123
>48690_mdo-miR162:pmrd
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 62 catgaatcgatcgataaacctctgcatcca 91
||||||||| ||||||||||| ||||||||
Sbjct: 58 catgaatcggtcgataaacctttgcatcca 87
>48685_lsa-miR162:pmrd
Length = 89
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 72 tcgataaacctctgcatcca 91
||||||||||||||||||||
Sbjct: 1 tcgataaacctctgcatcca 20
>48546_gma-miR162m:pmrd
Length = 367
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 72 tcgataaacctctgcatcca 91
||||||||||||||||||||
Sbjct: 1 tcgataaacctctgcatcca 20
