miRNEST 2.0, an integrative microRNA resource :: BLAST
>54691_tae-miR444:pmrd
Length = 426
Score = 212 bits (107), Expect = 6e-56
Identities = 140/151 (92%)
Strand = Plus / Plus
Query: 1 gcaccaagcatgaggcaacaactgcagtacttgtggggaaggcacaagtaggacaccaac 60
||||| |||||||||||||||||||| |||||| ||||||||| ||||||||||||| |
Sbjct: 23 gcaccgagcatgaggcaacaactgcattacttgcggggaaggcgcaagtaggacacctgc 82
Query: 61 attacctgcaagcaagacgcaaaattaatagaacatcaccatacttgtggctttcttgca 120
||||| ||||| |||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 83 attacttgcaaacaaggcgcaaaattaatagaagatcaccatacttgtggctttcttgca 142
Query: 121 agtcgtgcagttgctgcctcaagcttgctgc 151
|||| ||||||||||||||||||||||||||
Sbjct: 143 agtcatgcagttgctgcctcaagcttgctgc 173
>54743_tae-miR2024b:pmrd
Length = 142
Score = 109 bits (55), Expect = 6e-25
Identities = 124/151 (82%), Gaps = 17/151 (11%)
Strand = Plus / Plus
Query: 1 gcaccaagcatgaggcaacaactgcagtacttgtggggaaggcacaagtaggacaccaac 60
||||| |||||||||||||||||||| |||||| ||||||||| ||||||||||||| |
Sbjct: 5 gcaccgagcatgaggcaacaactgcattacttgcggggaaggcgcaagtaggacacctgc 64
Query: 61 attacctgcaagcaagacgcaaaattaatagaacatcaccatacttgtggctttcttgca 120
||||| ||||| |||| |||| ||||||||||||||||||||||
Sbjct: 65 attacttgcaaacaaggcgca-----------------ccatacttgtggctttcttgca 107
Query: 121 agtcgtgcagttgctgcctcaagcttgctgc 151
|||| ||||||||||||||||||||||||||
Sbjct: 108 agtcatgcagttgctgcctcaagcttgctgc 138
>49007_osa-miR444f:pmrd
Length = 154
Score = 65.9 bits (33), Expect = 8e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 111 ctttcttgcaagtcgtgcagttgctgcctcaagcttgctgc 151
||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 109 ctttcttgcaagttgtgcagttgttgcctcaagcttgctgc 149
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 1 gcaccaagcatgaggcaacaactgcagtacttg 33
||||||||||||||| ||||||||| ||||||
Sbjct: 7 gcaccaagcatgaggttacaactgcattacttg 39
>48798_oru-miR444:pmrd
Length = 165
Score = 65.9 bits (33), Expect = 8e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 111 ctttcttgcaagtcgtgcagttgctgcctcaagcttgctgc 151
||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 114 ctttcttgcaagttgtgcagttgttgcctcaagcttgctgc 154
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 1 gcaccaagcatgaggcaacaactgcagtacttg 33
||||||||||||||| ||||||||| ||||||
Sbjct: 12 gcaccaagcatgaggttacaactgcattacttg 44
>54742_tae-miR2024a:pmrd
Length = 118
Score = 56.0 bits (28), Expect = 8e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 111 ctttcttgcaagtcgtgcagttgctgcctcaagcttgctg 150
|||||| |||||| |||||||||||| |||||||||||||
Sbjct: 74 ctttctcgcaagttgtgcagttgctgtctcaagcttgctg 113
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 1 gcaccaagcatgaggcaacaactgcagtacttg 33
|||||||||||||||| ||||||||| ||||||
Sbjct: 2 gcaccaagcatgaggcgacaactgcattacttg 34
>54376_pvi-miR444:pmrd
Length = 127
Score = 56.0 bits (28), Expect = 8e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 112 tttcttgcaagtcgtgcagttgctgcctcaagcttgctgc 151
|||||||||||| ||||||||| || ||||||||||||||
Sbjct: 77 tttcttgcaagttgtgcagttgttgtctcaagcttgctgc 116
Score = 40.1 bits (20), Expect = 5e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 112 tttcttgcaagtcgtgcagttgctgcctcaagcttg 147
||||||||||| ||||||||||||||| ||||||
Sbjct: 50 tttcttgcaagatatgcagttgctgcctctagcttg 15
>48319_bdi-miR444:pmrd
Length = 110
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 126 tgcagttgctgcctcaagcttgctgc 151
||||||||||||||||||||||||||
Sbjct: 85 tgcagttgctgcctcaagcttgctgc 110
>49006_osa-miR444e:pmrd
Length = 140
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 126 tgcagttgctgcctcaagcttgctgc 151
||||||||||||||||||||| ||||
Sbjct: 99 tgcagttgctgcctcaagcttactgc 124
>55114_zma-miR444a:pmrd
Length = 138
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 131 ttgctgcctcaagcttgctgc 151
|||||||||||||||||||||
Sbjct: 1 ttgctgcctcaagcttgctgc 21
