miRNEST 2.0, an integrative microRNA resource :: BLAST
>46909_ata-miR1122:pmrd
Length = 170
Score = 81.8 bits (41), Expect = 1e-16
Identities = 101/119 (84%), Gaps = 2/119 (1%)
Strand = Plus / Plus
Query: 1 atactccctccgtccgaaaatagttgtcttcgaaatgaatgtatctagacttaattntag 60
||||||||||||||||||| || ||||| |||||| |||||||||||| | ||| |||
Sbjct: 25 atactccctccgtccgaaattatttgtcggagaaatggatgtatctagacgt-attttag 83
Query: 61 ttatagatacatcca-ttntatttatttctaggacaagtatttccggacggagggagta 118
|| |||||||||||| || ||| |||||| ||||||| ||||||||||||||||||
Sbjct: 84 ttctagatacatccatttttatccatttctgcaacaagtagttccggacggagggagta 142
>54703_tae-miR1128:pmrd
Length = 188
Score = 54.0 bits (27), Expect = 2e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 2 tactccctccgtccgaaaatagttgtcttcgaaatgaat 40
||||||||||||||||||||| ||||| || ||||||||
Sbjct: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaat 72
Score = 48.1 bits (24), Expect = 1e-06
Identities = 56/66 (84%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 54 attntagttatagatacatcca-ttntatttatttctaggacaagtatttccggacggag 112
||| ||||| ||||||||||| || |||| |||| | ||||||||||| |||||||||
Sbjct: 99 attttagttctagatacatccccttttattcattttgatgacaagtattttcggacggag 40
Query: 113 ggagta 118
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Sbjct: 39 ggagta 34
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 2 tactccctccgtccgaaaatagttgtcttcgaaatg 37
||||||||||||||| ||||||||||| || |||||
Sbjct: 160 tactccctccgtccggaaatagttgtcatcaaaatg 125
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 92 gacaagtatttccggacggagggagta 118
||||| |||||||||||||||||||||
Sbjct: 134 gacaactatttccggacggagggagta 160
>54702_tae-miR1127:pmrd
Length = 150
Score = 46.1 bits (23), Expect = 6e-06
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 54 attntagttatagatacatccattntatttatttctaggacaagtatttccggacggagg 113
||| ||||| |||||||||||||| | | |||| | |||||||| ||||| |||||||
Sbjct: 70 attttagttgtagatacatccatttttatcatttttgtgacaagtaattccgaacggagg 129
Query: 114 gagta 118
|||||
Sbjct: 130 gagta 134
>54757_tmo-miR1122:pmrd
Length = 180
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 2 tactccctccgtccgaaaatagttgtctt 30
|||||||||||||| ||||| ||||||||
Sbjct: 26 tactccctccgtcccaaaattgttgtctt 54
>54710_tae-miR1135:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 4e-04
Identities = 62/75 (82%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 2 tactccctccgtccgaaaatagttgtcttcgaaatgaatgtatctagacttaattntagt 61
|||||||||||| || || || ||||| ||||| |||||||||||| || || ||||
Sbjct: 108 tactccctccgttcggaattacttgtcgcagaaatagatgtatctagacgta-ttttagt 50
Query: 62 tatagatacatccat 76
| |||||||||||||
Sbjct: 49 tctagatacatccat 35
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 83 tatttctaggacaagtatttccggacggagggagta 118
||||||| |||||||| ||||| ||||||||||||
Sbjct: 73 tatttctgcgacaagtaattccgaacggagggagta 108
>54708_tae-miR1133:pmrd
Length = 180
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 atactccctccgtccgaaaa 20
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Sbjct: 32 atactccctccgtccgaaaa 51
