miRNEST 2.0, an integrative microRNA resource :: BLAST
>48338_bna-miR156c:pmrd
Length = 155
Score = 145 bits (73), Expect = 1e-35
Identities = 76/77 (98%)
Strand = Plus / Plus
Query: 68 ggatataaggaaattcaagaaagagaggaaaaaagagcctgcatctctactcttttgtgc 127
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 61 ggatataaggaaattcaagaaagagaggaaaaaagagcctgcatctttactcttttgtgc 120
Query: 128 tctctatacttctgtca 144
|||||||||||||||||
Sbjct: 121 tctctatacttctgtca 137
Score = 81.8 bits (41), Expect = 1e-16
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcactaaggatgacatgcaagtaca 41
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 19 tgacagaagatagagagcactaaggatgacatgcaagtaca 59
>46926_ath-miR157c:pmrd
Length = 217
Score = 133 bits (67), Expect = 4e-32
Identities = 70/71 (98%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcactaaggatgacatgcaagtacatacatatatatcatcacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25 tgacagaagatagagagcactaaggatgacatgcaagtacatacatatatatcatcacac 84
Query: 61 cgcaagtggat 71
|||| ||||||
Sbjct: 85 cgcatgtggat 95
>48393_bra-miR157a:pmrd
Length = 149
Score = 101 bits (51), Expect = 1e-22
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcactaaggatgacatgcaagtacatacatatatatcatcacac 60
||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 15 tgacagaagatagagagcactaaggatgacatgcaagtacatatgtatgtatcatcacac 74
Query: 61 cgc 63
|||
Sbjct: 75 cgc 77
Score = 71.9 bits (36), Expect = 1e-13
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 97 aaaaagagcctgcatctctactcttttgtgctctctatacttctgtca 144
||||| ||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 92 aaaaatagcctgcatgtctactctttcgtgctctctatacttctgtca 139
>48337_bna-miR156b:pmrd
Length = 208
Score = 101 bits (51), Expect = 1e-22
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcactaaggatgacatgcaagtacatacatatatatcatcacac 60
||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 26 tgacagaagatagagagcactaaggatgacatgcaagtacatatgtatgtatcatcacac 85
Query: 61 cgc 63
|||
Sbjct: 86 cgc 88
>48384_bol-miR157a:pmrd
Length = 106
Score = 81.8 bits (41), Expect = 1e-16
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcactaaggatgacatgcaagtaca 41
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 tgacagaagatagagagcactaaggatgacatgcaagtaca 47
Score = 65.9 bits (33), Expect = 8e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 108 gcatctctactcttttgtgctctctatacttctgtca 144
|||||| ||||||||||||||||||||||||||||||
Sbjct: 65 gcatctttactcttttgtgctctctatacttctgtca 101
>46927_ath-miR157d:pmrd
Length = 221
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcactaaggatg 28
||||||||||||||||||||||||||||
Sbjct: 24 tgacagaagatagagagcactaaggatg 51
Score = 46.1 bits (23), Expect = 7e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 106 ctgcatctctactcttttgtgctctctatacttctgtca 144
||||||||||| || | |||||||||||| |||||||||
Sbjct: 155 ctgcatctctattcctatgtgctctctatgcttctgtca 193
>48698_mtr-miR157:pmrd
Length = 111
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcactaaggatgacatgca 35
||||||||||||||| ||||||||||||| |||||
Sbjct: 2 tgacagaagatagagggcactaaggatgatatgca 36
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 121 tttgtgctctctatacttctgtca 144
||||||||||||| ||||||||||
Sbjct: 87 tttgtgctctctagacttctgtca 110
>54661_stu-miR157a:pmrd
Length = 91
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcactaaggatgacatgc 34
||||||||||||||||||||||| ||||| ||||
Sbjct: 2 tgacagaagatagagagcactaatgatgatatgc 35
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 121 tttgtgctctctatacttctgtca 144
|||||||||||||| |||||||||
Sbjct: 67 tttgtgctctctatgcttctgtca 90
>54532_sly-miR156a:pmrd
Length = 100
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcactaaggatgacatgc 34
||||||||||||||||||||||| ||||| ||||
Sbjct: 2 tgacagaagatagagagcactaatgatgatatgc 35
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 108 gcatctctactcttttgtgctctctatacttctgtca 144
||||||| | || |||||||||||||| |||||||||
Sbjct: 63 gcatctcaattcatttgtgctctctatgcttctgtca 99
>48531_gma-miR156d:pmrd
Length = 151
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 115 tactcttttgtgctctctatacttctgtca 144
||||| ||||||||||||||||||||||||
Sbjct: 102 tactcctttgtgctctctatacttctgtca 131
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 22 tgacagaagatagagagcac 41
>46862_aqc-miR156b:pmrd
Length = 83
Score = 48.1 bits (24), Expect = 2e-06
Identities = 40/44 (90%), Gaps = 1/44 (2%)
Strand = Plus / Plus
Query: 101 agagcctgcatctctactcttttgtgctctctatacttctgtca 144
|||| ||||||||| |||| |||||||||||||| |||||||||
Sbjct: 39 agagtctgcatctc-actcctttgtgctctctatgcttctgtca 81
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcac 20
>54774_vvi-miR156i:pmrd
Length = 103
Score = 46.1 bits (23), Expect = 7e-06
Identities = 39/43 (90%), Gaps = 1/43 (2%)
Strand = Plus / Plus
Query: 102 gagcctgcatctctactcttttgtgctctctatacttctgtca 144
||||| ||||||| |||| |||||||||||||| |||||||||
Sbjct: 49 gagccagcatctc-actcctttgtgctctctattcttctgtca 90
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcactaaggatgacatgcaag 37
|||||||||||||||||||| | ||||| |||||||
Sbjct: 12 tgacagaagatagagagcacagatgatgaaatgcaag 48
>52807_ptc-miRf10985-akr:pmrd
Length = 87
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcactaaggatgacatgca 35
||||||||||||||||||||| | ||||| |||||
Sbjct: 3 tgacagaagatagagagcactgacgatgaaatgca 37
>51598_ptc-miR156h:pmrd
Length = 103
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcactaaggatgacatgca 35
||||||||||||||||||||| | ||||| |||||
Sbjct: 12 tgacagaagatagagagcactgacgatgaaatgca 46
>48537_gma-miR157c:pmrd
Length = 84
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1 tgacagaagatagagagcactaaggatgacatgca 35
||||||||||||||||||||| | ||||| |||||
Sbjct: 83 tgacagaagatagagagcactgatgatgaaatgca 49
>48532_gma-miR156e:pmrd
Length = 124
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcactaaggatgacatgca 35
||||||||||||||||||||| | ||||| |||||
Sbjct: 22 tgacagaagatagagagcactgatgatgaaatgca 56
>54772_vvi-miR156g:pmrd
Length = 103
Score = 44.1 bits (22), Expect = 3e-05
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 107 tgcatctctactcttttgtgctctctatacttctgtca 144
|||||||| |||| ||||||||||||| ||||||||||
Sbjct: 54 tgcatctc-actcctttgtgctctctagacttctgtca 90
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcac 31
>52045_ptc-miRf10223-akr:pmrd
Length = 86
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 116 actcttttgtgctctctatacttctgtca 144
|||| |||||||||||||| |||||||||
Sbjct: 55 actcctttgtgctctctatgcttctgtca 83
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 4 tgacagaagatagagagcac 23
>51600_ptc-miR156j:pmrd
Length = 100
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 116 actcttttgtgctctctatacttctgtca 144
|||| |||||||||||||| |||||||||
Sbjct: 63 actcctttgtgctctctatgcttctgtca 91
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcac 31
>48695_mtr-miR156e:pmrd
Length = 172
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 116 actcttttgtgctctctatacttctgtca 144
|||| |||||||||||||| |||||||||
Sbjct: 139 actcctttgtgctctctatgcttctgtca 167
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 7 tgacagaagatagagagcac 26
>48631_gra-miR157b:pmrd
Length = 91
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 116 actcttttgtgctctctatacttctgtca 144
|||| |||||||||||||| |||||||||
Sbjct: 58 actcctttgtgctctctatgcttctgtca 86
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 6 tgacagaagatagagagcac 25
>54771_vvi-miR156f:pmrd
Length = 105
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcac 31
>54570_smo-miR156b:pmrd
Length = 112
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcac 31
>54534_sly-miR156c:pmrd
Length = 83
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 2 tgacagaagatagagagcac 21
>54533_sly-miR156b:pmrd
Length = 84
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 2 tgacagaagatagagagcac 21
>51599_ptc-miR156i:pmrd
Length = 99
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcac 31
>51597_ptc-miR156g:pmrd
Length = 103
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcac 31
>51552_pta-miR156b:pmrd
Length = 83
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 3 tgacagaagatagagagcac 22
>51551_pta-miR156a:pmrd
Length = 83
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 3 tgacagaagatagagagcac 22
>48790_nta-miR157:pmrd
Length = 131
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 2 tgacagaagatagagagcac 21
>48697_mtr-miR156h:pmrd
Length = 94
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 7 tgacagaagatagagagcac 26
>48696_mtr-miR156f:pmrd
Length = 94
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 7 tgacagaagatagagagcac 26
>48675_lja-miR157a:pmrd
Length = 58
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 2 tgacagaagatagagagcac 21
>48642_han-miR157a:pmrd
Length = 86
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 2 tgacagaagatagagagcac 21
>48630_gra-miR157a:pmrd
Length = 101
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 6 tgacagaagatagagagcac 25
>48530_gma-miR156c:pmrd
Length = 185
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 147 tgacagaagatagagagcac 166
>46925_ath-miR157b:pmrd
Length = 132
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 20 tgacagaagatagagagcac 39
>46924_ath-miR157a:pmrd
Length = 98
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 5 tgacagaagatagagagcac 24
>46861_aqc-miR156a:pmrd
Length = 81
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcac 20
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 121 tttgtgctctctatacttctgtca 144
|||||||||||||| |||||||||
Sbjct: 56 tttgtgctctctatgcttctgtca 79
