miRNEST 2.0, an integrative microRNA resource :: BLAST
>54924_zma-miR156o:pmrd
Length = 99
Score = 153 bits (77), Expect = 3e-38
Identities = 90/93 (96%), Gaps = 1/93 (1%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggtgcctttcttgcatgatgaacgatcgagag-gttcat 59
||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||
Sbjct: 4 cagaagagagtgagcacacatggtgcctttcttgcatgatgtatgatcgagagagttcat 63
Query: 60 gctcgaagctatgcgtgctcacttctctctctg 92
|||||||||||||||||||||||||||||||||
Sbjct: 64 gctcgaagctatgcgtgctcacttctctctctg 96
>54913_zma-miR156c:pmrd
Length = 139
Score = 147 bits (74), Expect = 2e-36
Identities = 87/90 (96%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggtgcctttcttgcatgatgaacgatcgagag-gttcat 59
||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||
Sbjct: 24 cagaagagagtgagcacacatggtgcctttcttgcatgatgtatgatcgagagagttcat 83
Query: 60 gctcgaagctatgcgtgctcacttctctct 89
||||||||||||||||||||||||||||||
Sbjct: 84 gctcgaagctatgcgtgctcacttctctct 113
>54927_zma-miR156r:pmrd
Length = 99
Score = 145 bits (73), Expect = 6e-36
Identities = 89/93 (95%), Gaps = 1/93 (1%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggtgcctttcttgcatgatgaacgatcgagag-gttcat 59
|||||||||||| |||||||||||||||||||||||||||| | ||||||||| ||||||
Sbjct: 4 cagaagagagtgggcacacatggtgcctttcttgcatgatgtatgatcgagagagttcat 63
Query: 60 gctcgaagctatgcgtgctcacttctctctctg 92
|||||||||||||||||||||||||||||||||
Sbjct: 64 gctcgaagctatgcgtgctcacttctctctctg 96
>54395_sbi-miR156c:pmrd
Length = 95
Score = 123 bits (62), Expect = 2e-29
Identities = 85/92 (92%), Gaps = 3/92 (3%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggtgcctttcttgcatgatgaacgatcgagaggttcatg 60
||||||||||||||||||||||||||||||||||||||||||| || | | ||||||
Sbjct: 4 cagaagagagtgagcacacatggtgcctttcttgcatgatgaatgagtg---gattcatg 60
Query: 61 ctcgaagctatgcgtgctcacttctctctctg 92
||||||||||||||||||||||||||||||||
Sbjct: 61 ctcgaagctatgcgtgctcacttctctctctg 92
>51354_ppr-miR156:pmrd
Length = 103
Score = 89.7 bits (45), Expect = 3e-19
Identities = 83/95 (87%), Gaps = 3/95 (3%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggtgcctttcttgcatgatgaacgatcgagag---gttc 57
|||||||||||||||||||||||||| ||||||||||| |||| | | ||| ||||
Sbjct: 5 cagaagagagtgagcacacatggtgcttttcttgcatggtgaattaatgggagagagttc 64
Query: 58 atgctcgaagctatgcgtgctcacttctctctctg 92
||||| ||||||||| |||||||||||||||||||
Sbjct: 65 atgcttgaagctatgtgtgctcacttctctctctg 99
>48803_osa-miR156c:pmrd
Length = 149
Score = 75.8 bits (38), Expect = 5e-15
Identities = 78/92 (84%), Gaps = 7/92 (7%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggtgcctttcttgcatgatgaacgatcgagaggttcatg 60
||||||||||||||||||||||||| |||||||||||| |||| | | |||||
Sbjct: 32 cagaagagagtgagcacacatggtgactttcttgcatgctgaatg-------gactcatg 84
Query: 61 ctcgaagctatgcgtgctcacttctctctctg 92
|| ||||||||| |||||||||||||||||||
Sbjct: 85 cttgaagctatgtgtgctcacttctctctctg 116
>48795_oru-miR156:pmrd
Length = 93
Score = 75.8 bits (38), Expect = 5e-15
Identities = 78/92 (84%), Gaps = 7/92 (7%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggtgcctttcttgcatgatgaacgatcgagaggttcatg 60
||||||||||||||||||||||||| |||||||||||| |||| | | |||||
Sbjct: 5 cagaagagagtgagcacacatggtgactttcttgcatgctgaatg-------gactcatg 57
Query: 61 ctcgaagctatgcgtgctcacttctctctctg 92
|| ||||||||| |||||||||||||||||||
Sbjct: 58 cttgaagctatgtgtgctcacttctctctctg 89
>47357_ath-miRf10257-akr:pmrd
Length = 94
Score = 65.9 bits (33), Expect = 5e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggtgcctttcttgcat 37
||||||||||||||||||||||||| |||||||||||
Sbjct: 6 cagaagagagtgagcacacatggtggctttcttgcat 42
>47356_ath-miRf10256-akr:pmrd
Length = 94
Score = 65.9 bits (33), Expect = 5e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggtgcctttcttgcat 37
||||||||||||||||||||||||| |||||||||||
Sbjct: 6 cagaagagagtgagcacacatggtggctttcttgcat 42
>46915_ath-miR156f:pmrd
Length = 132
Score = 65.9 bits (33), Expect = 5e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggtgcctttcttgcat 37
||||||||||||||||||||||||| |||||||||||
Sbjct: 24 cagaagagagtgagcacacatggtggctttcttgcat 60
>48248_ath-miRf11148-akr:pmrd
Length = 96
Score = 52.0 bits (26), Expect = 7e-08
Identities = 36/38 (94%), Gaps = 1/38 (2%)
Strand = Plus / Minus
Query: 1 cagaagagagtgagcacacatggtgcctttcttgcatg 38
||||||||||||||||||||||||| |||||||||||
Sbjct: 93 cagaagagagtgagcacacatggtg-gtttcttgcatg 57
>46914_ath-miR156e:pmrd
Length = 107
Score = 52.0 bits (26), Expect = 7e-08
Identities = 36/38 (94%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggtgcctttcttgcatg 38
||||||||||||||||||||||||| |||||||||||
Sbjct: 10 cagaagagagtgagcacacatggtg-gtttcttgcatg 46
>54768_vvi-miR156c:pmrd
Length = 104
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggt 24
||||||||||||||||||||||||
Sbjct: 14 cagaagagagtgagcacacatggt 37
>54770_vvi-miR156e:pmrd
Length = 108
Score = 46.1 bits (23), Expect = 4e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggtgcctttcttgcatga 39
|||| |||||||||||| |||||| | ||||||||||||
Sbjct: 14 cagaggagagtgagcactcatggttcttttcttgcatga 52
>53789_ptc-miRf11967-akr:pmrd
Length = 87
Score = 46.1 bits (23), Expect = 4e-06
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggtgcctttcttgcatga 39
|||||||||||||||||||| ||| |||||||||||||
Sbjct: 6 cagaagagagtgagcacacagggt-actttcttgcatga 43
>52469_ptc-miRf10647-akr:pmrd
Length = 104
Score = 46.1 bits (23), Expect = 4e-06
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Minus
Query: 1 cagaagagagtgagcacacatggtgcctttcttgcatga 39
|||||||||||||||||||| ||| |||||||||||||
Sbjct: 90 cagaagagagtgagcacacagggt-actttcttgcatga 53
>51594_ptc-miR156d:pmrd
Length = 101
Score = 46.1 bits (23), Expect = 4e-06
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggtgcctttcttgcatga 39
|||||||||||||||||||| ||| |||||||||||||
Sbjct: 14 cagaagagagtgagcacacagggt-actttcttgcatga 51
>51592_ptc-miR156b:pmrd
Length = 101
Score = 46.1 bits (23), Expect = 4e-06
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggtgcctttcttgcatga 39
|||||||||||||||||||| ||| |||||||||||||
Sbjct: 14 cagaagagagtgagcacacagggt-actttcttgcatga 51
>49326_osa-miRf10111-akr:pmrd
Length = 100
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 66 agctatgcgtgctcacttctctctctg 92
||||| |||||||||||||||||||||
Sbjct: 66 agctacgcgtgctcacttctctctctg 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggt 24
||||||||||||||||||| ||||
Sbjct: 10 cagaagagagtgagcacacgtggt 33
>48801_osa-miR156a:pmrd
Length = 100
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 66 agctatgcgtgctcacttctctctctg 92
||||| |||||||||||||||||||||
Sbjct: 66 agctacgcgtgctcacttctctctctg 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggt 24
||||||||||||||||||| ||||
Sbjct: 10 cagaagagagtgagcacacgtggt 33
>46916_ath-miR156g:pmrd
Length = 103
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatgg 23
|||||||||||||||||||||||
Sbjct: 14 cagaagagagtgagcacacatgg 36
>54911_zma-miR156a:pmrd
Length = 152
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 tgcgtgctcacttctctctctg 92
||||||||||||||||||||||
Sbjct: 109 tgcgtgctcacttctctctctg 130
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacaca 20
||||||||||||||||||||
Sbjct: 21 cagaagagagtgagcacaca 40
>54401_sbi-miR156i:pmrd
Length = 121
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 tgcgtgctcacttctctctctg 92
||||||||||||||||||||||
Sbjct: 95 tgcgtgctcacttctctctctg 116
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacaca 20
||||||||||||||||||||
Sbjct: 6 cagaagagagtgagcacaca 25
>49442_osa-miRf10227-akr:pmrd
Length = 93
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1 cagaagagagtgagcacacatggtgc 26
|||||||||||||||||||| |||||
Sbjct: 86 cagaagagagtgagcacacacggtgc 61
>48807_osa-miR156g:pmrd
Length = 116
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 tgcgtgctcacttctctctctg 92
||||||||||||||||||||||
Sbjct: 89 tgcgtgctcacttctctctctg 110
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacaca 20
||||||||||||||||||||
Sbjct: 7 cagaagagagtgagcacaca 26
>48802_osa-miR156b:pmrd
Length = 176
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggtgc 26
|||||||||||||||||||| |||||
Sbjct: 46 cagaagagagtgagcacacacggtgc 71
>48489_ghr-miR156b:pmrd
Length = 113
Score = 44.1 bits (22), Expect = 2e-05
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggtgcctttcttgcatg 38
|||||||||||||||||||| ||| ||||||||||||
Sbjct: 6 cagaagagagtgagcacacagggt-actttcttgcatg 42
>48488_ghr-miR156a:pmrd
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggtgcctttcttgcatg 38
|||||||||||||||||||| ||| ||||||||||||
Sbjct: 12 cagaagagagtgagcacacagggt-actttcttgcatg 48
>54922_zma-miR156m:pmrd
Length = 83
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggtg 25
|||||||||||||||||||| ||||
Sbjct: 4 cagaagagagtgagcacacacggtg 28
>54912_zma-miR156b:pmrd
Length = 124
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggtg 25
|||||||||||||||||||| ||||
Sbjct: 24 cagaagagagtgagcacacacggtg 48
>54394_sbi-miR156b:pmrd
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacacatggtg 25
|||||||||||||||||||| ||||
Sbjct: 4 cagaagagagtgagcacacacggtg 28
>51355_ppt-miR156a:pmrd
Length = 115
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 3 gaagagagtgagcacacatgg 23
|||||||||||||||||||||
Sbjct: 91 gaagagagtgagcacacatgg 71
>54767_vvi-miR156b:pmrd
Length = 102
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacaca 20
||||||||||||||||||||
Sbjct: 14 cagaagagagtgagcacaca 33
>51926_ptc-miRf10104-akr:pmrd
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacaca 20
||||||||||||||||||||
Sbjct: 11 cagaagagagtgagcacaca 30
>51596_ptc-miR156f:pmrd
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacaca 20
||||||||||||||||||||
Sbjct: 14 cagaagagagtgagcacaca 33
>51595_ptc-miR156e:pmrd
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacaca 20
||||||||||||||||||||
Sbjct: 14 cagaagagagtgagcacaca 33
>51593_ptc-miR156c:pmrd
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacaca 20
||||||||||||||||||||
Sbjct: 14 cagaagagagtgagcacaca 33
>51591_ptc-miR156a:pmrd
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacaca 20
||||||||||||||||||||
Sbjct: 14 cagaagagagtgagcacaca 33
>48806_osa-miR156f:pmrd
Length = 186
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacaca 20
||||||||||||||||||||
Sbjct: 7 cagaagagagtgagcacaca 26
>48652_hvv-miR156a:pmrd
Length = 394
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacaca 20
||||||||||||||||||||
Sbjct: 4 cagaagagagtgagcacaca 23
>48490_ghr-miR156c:pmrd
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacaca 20
||||||||||||||||||||
Sbjct: 6 cagaagagagtgagcacaca 25
>48336_bna-miR156a:pmrd
Length = 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacaca 20
||||||||||||||||||||
Sbjct: 4 cagaagagagtgagcacaca 23
>47667_ath-miRf10567-akr:pmrd
Length = 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacaca 20
||||||||||||||||||||
Sbjct: 9 cagaagagagtgagcacaca 28
>46913_ath-miR156d:pmrd
Length = 118
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacaca 20
||||||||||||||||||||
Sbjct: 21 cagaagagagtgagcacaca 40
>46912_ath-miR156c:pmrd
Length = 104
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacaca 20
||||||||||||||||||||
Sbjct: 15 cagaagagagtgagcacaca 34
>46910_ath-miR156a:pmrd
Length = 123
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagtgagcacaca 20
||||||||||||||||||||
Sbjct: 24 cagaagagagtgagcacaca 43
