miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>48648_hpr-miR1120:pmrd
          Length = 85

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                   
Query: 1  tactccctccgtctcaaaataactgtctcaactttgtacta 41
          ||||||||||||| |||||||| || ||||||||| |||||
Sbjct: 80 tactccctccgtcccaaaataagtgactcaactttatacta 40



 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                             
Query: 1  tactccctccgtctcaaaataactgtctcaacttt 35
          ||||||||||||| |||||||| || |||||||||
Sbjct: 6  tactccctccgtcccaaaataagtgactcaacttt 40



 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                         
Query: 67 ttgagacacttattttggaacggagggagta 97
          ||||| |||||||||||| ||||||||||||
Sbjct: 36 ttgagtcacttattttgggacggagggagta 6



 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                         
Query: 67 ttgagacacttattttggaacggagggagta 97
          ||||| |||||||||||| ||||||||||||
Sbjct: 50 ttgagtcacttattttgggacggagggagta 80




>48325_bdi-miR2502:pmrd
          Length = 94

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 1  tactccctccgtctcaaaataactg 25
          |||||||||||||||||||||||||
Sbjct: 5  tactccctccgtctcaaaataactg 29




>46908_ata-miR1120:pmrd
          Length = 85

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 57/66 (86%), Gaps = 2/66 (3%)
 Strand = Plus / Minus

                                                                      
Query: 27 ctcaactttgtactagctctagtataaaatt-gtactaagcttgagacacttattttgga 85
          ||||||||||||||| || ||||| |||||| |||| ||| ||||| ||  |||||||||
Sbjct: 65 ctcaactttgtactaactatagtacaaaattagtacaaag-ttgagtcatctattttgga 7

                
Query: 86 acggag 91
          ||||||
Sbjct: 6  acggag 1




>50995_osa-miRf11780-akr:pmrd
          Length = 116

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 77  tattttggaacggagggagta 97
           |||||||||||||||||||||
Sbjct: 95  tattttggaacggagggagta 115




>49596_osa-miRf10381-akr:pmrd
          Length = 147

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 73 cacttattttggaacggagggagta 97
          |||||||||||| ||||||||||||
Sbjct: 25 cacttattttgggacggagggagta 1