miRNEST 2.0, an integrative microRNA resource :: BLAST
>52045_ptc-miRf10223-akr:pmrd
Length = 86
Score = 77.8 bits (39), Expect = 9e-16
Identities = 68/75 (90%), Gaps = 2/75 (2%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatggatgacttgcaatgaa-tatgcatctcactcctttgtg 59
|||||||||||||||||||||| |||| ||||||| | | |||||| ||||||||||||
Sbjct: 7 cagaagatagagagcacagatg-atgatatgcaatggactctgcatcccactcctttgtg 65
Query: 60 ctctctatgcttctg 74
|||||||||||||||
Sbjct: 66 ctctctatgcttctg 80
>51600_ptc-miR156j:pmrd
Length = 100
Score = 77.8 bits (39), Expect = 9e-16
Identities = 68/75 (90%), Gaps = 2/75 (2%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatggatgacttgcaatgaa-tatgcatctcactcctttgtg 59
|||||||||||||||||||||| |||| ||||||| | | |||||| ||||||||||||
Sbjct: 15 cagaagatagagagcacagatg-atgatatgcaatggactctgcatcccactcctttgtg 73
Query: 60 ctctctatgcttctg 74
|||||||||||||||
Sbjct: 74 ctctctatgcttctg 88
>51599_ptc-miR156i:pmrd
Length = 99
Score = 69.9 bits (35), Expect = 2e-13
Identities = 67/75 (89%), Gaps = 2/75 (2%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatggatgacttgcaat-gaatatgcatctcactcctttgtg 59
|||||||||||||||||||||| ||| ||||| | || | || ||||||||||||||||
Sbjct: 15 cagaagatagagagcacagatg-atgttttgcagtagactctggatctcactcctttgtg 73
Query: 60 ctctctatgcttctg 74
|||||||||||||||
Sbjct: 74 ctctctatgcttctg 88
>54774_vvi-miR156i:pmrd
Length = 103
Score = 67.9 bits (34), Expect = 9e-13
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatggatgacttgcaatgaatatgcatctcactcctttgtgc 60
|||||||||||||||||||||| |||| ||||| || |||||||||||||||||||
Sbjct: 15 cagaagatagagagcacagatg-atgaaatgcaaggagccagcatctcactcctttgtgc 73
Query: 61 tctctatgcttctg 74
||||||| ||||||
Sbjct: 74 tctctattcttctg 87
>54772_vvi-miR156g:pmrd
Length = 103
Score = 67.9 bits (34), Expect = 9e-13
Identities = 59/66 (89%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatggatgacttgcaatgaatatgcatctcactcctttgtgc 60
|||||||||||||||||||||| |||| |||| || | ||||||||||||||||||||
Sbjct: 15 cagaagatagagagcacagatg-atgatgtgcatggagtttgcatctcactcctttgtgc 73
Query: 61 tctcta 66
||||||
Sbjct: 74 tctcta 79
>46862_aqc-miR156b:pmrd
Length = 83
Score = 67.9 bits (34), Expect = 9e-13
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 41 tgcatctcactcctttgtgctctctatgcttctg 74
||||||||||||||||||||||||||||||||||
Sbjct: 45 tgcatctcactcctttgtgctctctatgcttctg 78
>48631_gra-miR157b:pmrd
Length = 91
Score = 61.9 bits (31), Expect = 6e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 40 atgcatctcactcctttgtgctctctatgcttctg 74
||||||| |||||||||||||||||||||||||||
Sbjct: 49 atgcatcccactcctttgtgctctctatgcttctg 83
>48695_mtr-miR156e:pmrd
Length = 172
Score = 60.0 bits (30), Expect = 2e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 41 tgcatctcactcctttgtgctctctatgcttctg 74
||||| ||||||||||||||||||||||||||||
Sbjct: 131 tgcatatcactcctttgtgctctctatgcttctg 164
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatg 22
||||||||||||||||||||||
Sbjct: 10 cagaagatagagagcacagatg 31
>46861_aqc-miR156a:pmrd
Length = 81
Score = 60.0 bits (30), Expect = 2e-10
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatggatgacttgcaatgaatatgcatctcactcctttgtgc 60
||||||||||||||||||||| || || ||||| || | |||||||| | ||||||||
Sbjct: 4 cagaagatagagagcacagat-gacgaattgcatggagtttgcatctcgatactttgtgc 62
Query: 61 tctctatgcttctg 74
||||||||||||||
Sbjct: 63 tctctatgcttctg 76
>48630_gra-miR157a:pmrd
Length = 101
Score = 54.0 bits (27), Expect = 1e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 40 atgcatctcactcctttgtgctctctatgcttctg 74
||||||| |||||||||||||||| ||||||||||
Sbjct: 59 atgcatcccactcctttgtgctctttatgcttctg 93
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatg 22
||||||||||||||||||||||
Sbjct: 9 cagaagatagagagcacagatg 30
>52807_ptc-miRf10985-akr:pmrd
Length = 87
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 41 tgcatctcactcctttgtgctctcta 66
||||||||||||||||||||||||||
Sbjct: 49 tgcatctcactcctttgtgctctcta 74
>51598_ptc-miR156h:pmrd
Length = 103
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 41 tgcatctcactcctttgtgctctcta 66
||||||||||||||||||||||||||
Sbjct: 58 tgcatctcactcctttgtgctctcta 83
>51597_ptc-miR156g:pmrd
Length = 103
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 41 tgcatctcactcctttgtgctctcta 66
||||||||||||||||||||||||||
Sbjct: 58 tgcatctcactcctttgtgctctcta 83
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatg 22
||||||||||||||||||||||
Sbjct: 15 cagaagatagagagcacagatg 36
>48531_gma-miR156d:pmrd
Length = 151
Score = 52.0 bits (26), Expect = 5e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 41 tgcatctcactcctttgtgctctctatgcttctg 74
||||||| ||||||||||||||||||| ||||||
Sbjct: 95 tgcatcttactcctttgtgctctctatacttctg 128
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatg 22
||||||||||||||||||||||
Sbjct: 25 cagaagatagagagcacagatg 46
>48537_gma-miR157c:pmrd
Length = 84
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 42 gcatctcactcctttgtgctctcta 66
|||||||||||||||||||||||||
Sbjct: 36 gcatctcactcctttgtgctctcta 12
>48532_gma-miR156e:pmrd
Length = 124
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 42 gcatctcactcctttgtgctctcta 66
|||||||||||||||||||||||||
Sbjct: 69 gcatctcactcctttgtgctctcta 93
>48642_han-miR157a:pmrd
Length = 86
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 47 tcactcctttgtgctctctatgcttctg 74
||||||||| ||||||||||||||||||
Sbjct: 55 tcactccttcgtgctctctatgcttctg 82
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacaga 20
||||||||||||||||||||
Sbjct: 5 cagaagatagagagcacaga 24
>54661_stu-miR157a:pmrd
Length = 91
Score = 44.1 bits (22), Expect = 1e-05
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 42 gcatctcactcc-tttgtgctctctatgcttctg 74
|||||||||| | |||||||||||||||||||||
Sbjct: 54 gcatctcacttcatttgtgctctctatgcttctg 87
>48790_nta-miR157:pmrd
Length = 131
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatg 22
||||||||||||||||||||||
Sbjct: 5 cagaagatagagagcacagatg 26
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 54 tttgtgctctctatgcttc 72
|||||||||||||||||||
Sbjct: 107 tttgtgctctctatgcttc 125
>48697_mtr-miR156h:pmrd
Length = 94
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatg 22
||||||||||||||||||||||
Sbjct: 10 cagaagatagagagcacagatg 31
Score = 42.1 bits (21), Expect = 5e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 42 gcatctcactcctttgtgctctctatgcttctg 74
|||||||| ||||||||||||| ||| ||||||
Sbjct: 54 gcatctcattcctttgtgctctttattcttctg 86
>46925_ath-miR157b:pmrd
Length = 132
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatg 22
||||||||||||||||||||||
Sbjct: 23 cagaagatagagagcacagatg 44
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 41 tgcatctcactcctttgtgctctcta 66
||||||| ||||||||||||||||||
Sbjct: 72 tgcatcttactcctttgtgctctcta 97
>46924_ath-miR157a:pmrd
Length = 98
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatg 22
||||||||||||||||||||||
Sbjct: 8 cagaagatagagagcacagatg 29
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 41 tgcatctcactcctttgtgctctcta 66
||||||| ||||||||||||||||||
Sbjct: 57 tgcatcttactcctttgtgctctcta 82
>54532_sly-miR156a:pmrd
Length = 100
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 54 tttgtgctctctatgcttctg 74
|||||||||||||||||||||
Sbjct: 76 tttgtgctctctatgcttctg 96
>54570_smo-miR156b:pmrd
Length = 112
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacaga 20
||||||||||||||||||||
Sbjct: 15 cagaagatagagagcacaga 34
>46927_ath-miR157d:pmrd
Length = 221
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 51 tcctttgtgctctctatgcttctg 74
|||| |||||||||||||||||||
Sbjct: 167 tcctatgtgctctctatgcttctg 190
>46926_ath-miR157c:pmrd
Length = 217
Score = 38.2 bits (19), Expect = 8e-04
Identities = 32/35 (91%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 41 tgcatctc-actcctttgtgctctctatgcttctg 74
|||||||| |||| |||||||||||||| ||||||
Sbjct: 151 tgcatctctactcttttgtgctctctatacttctg 185
