miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48876_osa-miR169a:pmrd
Length = 173
Score = 184 bits (93), Expect = 7e-48
Identities = 93/93 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccgatcgatcgatctatctatgaagctaagctagctggccatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39 agccaaggatgacttgccgatcgatcgatctatctatgaagctaagctagctggccatgg 98
Query: 61 atccatccatcaattggcaagttgttcttggct 93
|||||||||||||||||||||||||||||||||
Sbjct: 99 atccatccatcaattggcaagttgttcttggct 131
>54437_sbi-miR169a:pmrd
Length = 91
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccgatcgatcgat 29
|||||||||||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccgatcgatcgat 30
>55023_zma-miR169u:pmrd
Length = 90
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccgatcgat 25
|||||||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccgatcgat 26
>55003_zma-miR169a:pmrd
Length = 130
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccgatcgat 25
|||||||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgccgatcgat 46
>55022_zma-miR169t:pmrd
Length = 116
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccgatcgatcg 27
|||||||||||||||||||||| ||||
Sbjct: 2 agccaaggatgacttgccgatctatcg 28
>55004_zma-miR169b:pmrd
Length = 156
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccgatcgatcg 27
|||||||||||||||||||||| ||||
Sbjct: 22 agccaaggatgacttgccgatctatcg 48
>54446_sbi-miR169j:pmrd
Length = 123
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccgatcgatcgat 29
||||||||||||||||||| ||||||||
Sbjct: 4 agccaaggatgacttgccggccgatcgat 32
>48562_gma-miR169b:pmrd
Length = 183
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccgat 21
|||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgccgat 32
>48351_bna-miR169b:pmrd
Length = 188
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccgat 21
|||||||||||||||||||||
Sbjct: 19 agccaaggatgacttgccgat 39
>48350_bna-miR169a:pmrd
Length = 132
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccgat 21
|||||||||||||||||||||
Sbjct: 20 agccaaggatgacttgccgat 40
>46964_ath-miR169e:pmrd
Length = 217
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccgat 21
|||||||||||||||||||||
Sbjct: 71 agccaaggatgacttgccgat 91
>46963_ath-miR169d:pmrd
Length = 154
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccgat 21
|||||||||||||||||||||
Sbjct: 43 agccaaggatgacttgccgat 63
>46960_ath-miR169a:pmrd
Length = 226
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccgat 21
|||||||||||||||||||||
Sbjct: 19 agccaaggatgacttgccgat 39
>55021_zma-miR169s:pmrd
Length = 150
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccga 20
||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccga 21
>54809_vvi-miR169g:pmrd
Length = 121
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccga 20
||||||||||||||||||||
Sbjct: 14 agccaaggatgacttgccga 33
>54808_vvi-miR169f:pmrd
Length = 184
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccga 20
||||||||||||||||||||
Sbjct: 14 agccaaggatgacttgccga 33
>54549_sly-miR169c:pmrd
Length = 147
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccga 20
||||||||||||||||||||
Sbjct: 42 agccaaggatgacttgccga 61
>54367_ptr-miR169a:pmrd
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccga 20
||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgccga 21
>52003_ptc-miRf10181-akr:pmrd
Length = 113
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccga 20
||||||||||||||||||||
Sbjct: 11 agccaaggatgacttgccga 30
>51660_ptc-miR169c:pmrd
Length = 102
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccga 20
||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgccga 31
>51659_ptc-miR169b:pmrd
Length = 113
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccga 20
||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgccga 31
>51652_ptc-miR169a:pmrd
Length = 165
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccga 20
||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgccga 31
>48719_mtr-miR169c:pmrd
Length = 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 agccaaggatgacttgccga 20
||||||||||||||||||||
Sbjct: 81 agccaaggatgacttgccga 62
>48718_mtr-miR169b:pmrd
Length = 121
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccga 20
||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgccga 41
>48717_mtr-miR169a:pmrd
Length = 121
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccga 20
||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgccga 41
>48563_gma-miR169c:pmrd
Length = 115
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccga 20
||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgccga 31
>48309_bdi-miR169a:pmrd
Length = 121
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccga 20
||||||||||||||||||||
Sbjct: 17 agccaaggatgacttgccga 36
>46859_ama-miR169:pmrd
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccga 20
||||||||||||||||||||
Sbjct: 15 agccaaggatgacttgccga 34
