miRNEST 2.0, an integrative microRNA resource :: BLAST
>54783_vvi-miR160f:pmrd
Length = 102
Score = 131 bits (66), Expect = 8e-32
Identities = 75/78 (96%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttgcagagcccaccggagcatcgatggcctccgtggatg 60
||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 12 gcctggctccctgtatgccatttgcagagcccaccggcacatcgatggccttcgtggatg 71
Query: 61 gcgtatgaggagccatgc 78
||||||||||||||||||
Sbjct: 72 gcgtatgaggagccatgc 89
>51610_ptc-miR160c:pmrd
Length = 98
Score = 131 bits (66), Expect = 8e-32
Identities = 75/78 (96%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttgcagagcccaccggagcatcgatggcctccgtggatg 60
||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgccatttgcagagcccaccggttcttcgatggcctccgtggatg 71
Query: 61 gcgtatgaggagccatgc 78
||||||||||||||||||
Sbjct: 72 gcgtatgaggagccatgc 89
>51609_ptc-miR160b:pmrd
Length = 98
Score = 131 bits (66), Expect = 8e-32
Identities = 75/78 (96%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttgcagagcccaccggagcatcgatggcctccgtggatg 60
||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgccatttgcagagcccaacggatcctcgatggcctccgtggatg 71
Query: 61 gcgtatgaggagccatgc 78
||||||||||||||||||
Sbjct: 72 gcgtatgaggagccatgc 89
>47213_ath-miRf10113-akr:pmrd
Length = 85
Score = 99.6 bits (50), Expect = 3e-22
Identities = 72/78 (92%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttgcagagcccaccggagcatcgatggcctccgtggatg 60
||||||||||||||||||||| ||| ||||||| || || ||||||| ||||||||||||
Sbjct: 5 gcctggctccctgtatgccatatgctgagcccatcg-agtatcgatgacctccgtggatg 63
Query: 61 gcgtatgaggagccatgc 78
||||||||||||||||||
Sbjct: 64 gcgtatgaggagccatgc 81
>46934_ath-miR160a:pmrd
Length = 85
Score = 99.6 bits (50), Expect = 3e-22
Identities = 72/78 (92%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttgcagagcccaccggagcatcgatggcctccgtggatg 60
||||||||||||||||||||| ||| ||||||| || || ||||||| ||||||||||||
Sbjct: 5 gcctggctccctgtatgccatatgctgagcccatcg-agtatcgatgacctccgtggatg 63
Query: 61 gcgtatgaggagccatgc 78
||||||||||||||||||
Sbjct: 64 gcgtatgaggagccatgc 81
>48542_gma-miR160a:pmrd
Length = 119
Score = 85.7 bits (43), Expect = 4e-18
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttgcagagcccaccggagcatcgatggcctccgtggatg 60
|||||||||||||||||||||||| ||||| || || |||||| ||| ||| |||||||
Sbjct: 22 gcctggctccctgtatgccatttgtagagctcatcgaagcatcaatgacctttgtggatg 81
Query: 61 gcgtatgaggagcca 75
|||||||||||||||
Sbjct: 82 gcgtatgaggagcca 96
>54781_vvi-miR160d:pmrd
Length = 102
Score = 67.9 bits (34), Expect = 1e-12
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttgcagagcccaccggagcatcgatggcctccgtggatg 60
|||||||||||||||||||||||||| || ||||| ||| || | | |||| || |||||
Sbjct: 12 gcctggctccctgtatgccatttgcaaagtccacccgaggattggtagccttcgcggatg 71
Query: 61 gcgtatgaggagccatgc 78
|||| ||||||||||||
Sbjct: 72 gcgtgcgaggagccatgc 89
>54541_sly-miR160a:pmrd
Length = 129
Score = 56.0 bits (28), Expect = 4e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttgcagagcccaccg 36
|||||||||||||||||||||||||| ||| |||||
Sbjct: 21 gcctggctccctgtatgccatttgcaaagctcaccg 56
>48397_bra-miR160a:pmrd
Length = 127
Score = 54.0 bits (27), Expect = 1e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 44 gatggcctccgtggatggcgtatgaggagccatgc 78
|||| |||||||| |||||||||||||||||||||
Sbjct: 69 gatgacctccgtgaatggcgtatgaggagccatgc 103
>48396_bra-miR160a:pmrd
Length = 127
Score = 54.0 bits (27), Expect = 1e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 44 gatggcctccgtggatggcgtatgaggagccatgc 78
|||| |||||||| |||||||||||||||||||||
Sbjct: 69 gatgacctccgtgaatggcgtatgaggagccatgc 103
>48703_mtr-miR160d:pmrd
Length = 91
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttgcagag 29
|||||||||||||||||||||||| ||||
Sbjct: 7 gcctggctccctgtatgccatttgtagag 35
>46865_aqc-miR160b:pmrd
Length = 82
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttgc 25
|||||||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgccatttgc 26
Score = 38.2 bits (19), Expect = 9e-04
Identities = 31/35 (88%)
Strand = Plus / Plus
Query: 44 gatggcctccgtggatggcgtatgaggagccatgc 78
|||||||| ||||||||||| ||||||||||||
Sbjct: 45 gatggcctttgtggatggcgtgcgaggagccatgc 79
>51615_ptc-miR160h:pmrd
Length = 98
Score = 48.1 bits (24), Expect = 9e-07
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttgcagagcccaccggagcatcgatggcctccgtggatg 60
||||||||||||| |||||||||||| ||| || | || | ||| |||||| |||||||
Sbjct: 12 gcctggctccctgcatgccatttgcatagctcatcagaacgtcggtggccttggtggatg 71
Query: 61 gcgt 64
||||
Sbjct: 72 gcgt 75
>48704_mtr-miR160e:pmrd
Length = 91
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 54 gtggatggcgtatgaggagcca 75
||||||||||||||||||||||
Sbjct: 60 gtggatggcgtatgaggagcca 81
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccat 21
|||||||||||||||||||||
Sbjct: 7 gcctggctccctgtatgccat 27
>48702_mtr-miR160b:pmrd
Length = 91
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 54 gtggatggcgtatgaggagcca 75
||||||||||||||||||||||
Sbjct: 60 gtggatggcgtatgaggagcca 81
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccat 21
|||||||||||||||||||||
Sbjct: 7 gcctggctccctgtatgccat 27
>54574_smo-miR160a:pmrd
Length = 106
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccat 21
|||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgccat 32
>51363_ppt-miR160e:pmrd
Length = 138
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccatttgc 25
|||||||||||||||||||| ||||
Sbjct: 31 gcctggctccctgtatgccacttgc 55
>54947_zma-miR160m:pmrd
Length = 81
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgcca 21
>54946_zma-miR160i:pmrd
Length = 81
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 3 gcctggctccctgtatgcca 22
>54945_zma-miR160h:pmrd
Length = 86
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgcca 21
>54944_zma-miR160g:pmrd
Length = 86
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgcca 21
>54942_zma-miR160e:pmrd
Length = 94
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 10 gcctggctccctgtatgcca 29
>54941_zma-miR160d:pmrd
Length = 142
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 22 gcctggctccctgtatgcca 41
>54940_zma-miR160c:pmrd
Length = 100
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 8 gcctggctccctgtatgcca 27
>54939_zma-miR160b:pmrd
Length = 121
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 22 gcctggctccctgtatgcca 41
>54938_zma-miR160a:pmrd
Length = 104
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 11 gcctggctccctgtatgcca 30
>54780_vvi-miR160c:pmrd
Length = 106
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>54759_ttu-miR160a:pmrd
Length = 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgcca 21
>54675_tae-miR160:pmrd
Length = 148
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 23 gcctggctccctgtatgcca 42
>54575_smo-miR160b:pmrd
Length = 108
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 14 gcctggctccctgtatgcca 33
>54408_sbi-miR160e:pmrd
Length = 95
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgcca 21
>54407_sbi-miR160d:pmrd
Length = 100
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgcca 21
>54406_sbi-miR160c:pmrd
Length = 83
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgcca 21
>54405_sbi-miR160b:pmrd
Length = 82
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgcca 21
>54404_sbi-miR160a:pmrd
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgcca 21
>53874_ptc-miRf12052-akr:pmrd
Length = 110
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 13 gcctggctccctgtatgcca 32
>51611_ptc-miR160d:pmrd
Length = 103
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>51608_ptc-miR160a:pmrd
Length = 102
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>51367_ppt-miR160i:pmrd
Length = 139
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgcca 50
>51364_ppt-miR160f:pmrd
Length = 138
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgcca 50
>51360_ppt-miR160b:pmrd
Length = 103
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>51359_ppt-miR160a:pmrd
Length = 99
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>51334_pga-miR160:pmrd
Length = 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgcca 21
>48833_osa-miR160n:pmrd
Length = 131
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgcca 21
>48832_osa-miR160m:pmrd
Length = 82
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgcca 21
>48829_osa-miR160d:pmrd
Length = 142
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 9 gcctggctccctgtatgcca 28
>48828_osa-miR160c:pmrd
Length = 99
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 8 gcctggctccctgtatgcca 27
>48827_osa-miR160b:pmrd
Length = 139
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgcca 50
>48826_osa-miR160a:pmrd
Length = 88
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 5 gcctggctccctgtatgcca 24
>48791_oba-miR160:pmrd
Length = 90
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 5 gcctggctccctgtatgcca 24
>48658_hvv-miR160a:pmrd
Length = 344
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 325 gcctggctccctgtatgcca 344
>47338_ath-miRf10238-akr:pmrd
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 6 gcctggctccctgtatgcca 25
>46936_ath-miR160c:pmrd
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 6 gcctggctccctgtatgcca 25
>46935_ath-miR160b:pmrd
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 6 gcctggctccctgtatgcca 25
