miRNEST 2.0, an integrative microRNA resource :: BLAST
>48695_mtr-miR156e:pmrd
Length = 172
Score = 61.9 bits (31), Expect = 7e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 54 tcactcctttgtgctctctatgcttctgtca 84
|||||||||||||||||||||||||||||||
Sbjct: 137 tcactcctttgtgctctctatgcttctgtca 167
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatgat 30
||||||||||||||||||||||||||||||
Sbjct: 7 tgacagaagatagagagcacagatgatgat 36
>46862_aqc-miR156b:pmrd
Length = 83
Score = 61.9 bits (31), Expect = 7e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 54 tcactcctttgtgctctctatgcttctgtca 84
|||||||||||||||||||||||||||||||
Sbjct: 51 tcactcctttgtgctctctatgcttctgtca 81
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatgat 30
||||||||||||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcacagatgatgat 30
>54772_vvi-miR156g:pmrd
Length = 103
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatgat 30
||||||||||||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcacagatgatgat 41
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 54 tcactcctttgtgctctctatgcttctgtca 84
|||||||||||||||||||| |||||||||
Sbjct: 60 tcactcctttgtgctctctagacttctgtca 90
>52045_ptc-miRf10223-akr:pmrd
Length = 86
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatgat 30
||||||||||||||||||||||||||||||
Sbjct: 4 tgacagaagatagagagcacagatgatgat 33
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 55 cactcctttgtgctctctatgcttctgtca 84
||||||||||||||||||||||||||||||
Sbjct: 54 cactcctttgtgctctctatgcttctgtca 83
>51600_ptc-miR156j:pmrd
Length = 100
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatgat 30
||||||||||||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcacagatgatgat 41
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 55 cactcctttgtgctctctatgcttctgtca 84
||||||||||||||||||||||||||||||
Sbjct: 62 cactcctttgtgctctctatgcttctgtca 91
>48790_nta-miR157:pmrd
Length = 131
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatgat 30
||||||||||||||||||||||||||||||
Sbjct: 2 tgacagaagatagagagcacagatgatgat 31
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 61 tttgtgctctctatgcttctgtca 84
||||||||||||||||||| ||||
Sbjct: 107 tttgtgctctctatgcttccgtca 130
>48642_han-miR157a:pmrd
Length = 86
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 51 aattcactcctttgtgctctctatgcttctgtca 84
|||||||||||| |||||||||||||||||||||
Sbjct: 52 aattcactccttcgtgctctctatgcttctgtca 85
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacaga 23
|||||||||||||||||||||||
Sbjct: 2 tgacagaagatagagagcacaga 24
>48631_gra-miR157b:pmrd
Length = 91
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 55 cactcctttgtgctctctatgcttctgtca 84
||||||||||||||||||||||||||||||
Sbjct: 57 cactcctttgtgctctctatgcttctgtca 86
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatg 28
||||||||||||||||||||||||||||
Sbjct: 6 tgacagaagatagagagcacagatgatg 33
>48531_gma-miR156d:pmrd
Length = 151
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatgat 30
||||||||||||||||||||||||||||||
Sbjct: 22 tgacagaagatagagagcacagatgatgat 51
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 56 actcctttgtgctctctatgcttctgtca 84
||||||||||||||||||| |||||||||
Sbjct: 103 actcctttgtgctctctatacttctgtca 131
>54774_vvi-miR156i:pmrd
Length = 103
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatga 29
|||||||||||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcacagatgatga 40
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 54 tcactcctttgtgctctctatgcttctgtca 84
||||||||||||||||||||| |||||||||
Sbjct: 60 tcactcctttgtgctctctattcttctgtca 90
>51597_ptc-miR156g:pmrd
Length = 103
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatga 29
|||||||||||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcacagatgatga 40
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 54 tcactcctttgtgctctctatgcttctgtca 84
|||||||||||||||||||| |||||||||
Sbjct: 64 tcactcctttgtgctctctagtcttctgtca 94
>48697_mtr-miR156h:pmrd
Length = 94
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatga 29
|||||||||||||||||||||||||||||
Sbjct: 7 tgacagaagatagagagcacagatgatga 35
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 58 tcctttgtgctctctatgcttctgtca 84
||||||||||||| ||| |||||||||
Sbjct: 63 tcctttgtgctctttattcttctgtca 89
>46924_ath-miR157a:pmrd
Length = 98
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatga 29
|||||||||||||||||||||||||||||
Sbjct: 5 tgacagaagatagagagcacagatgatga 33
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 56 actcctttgtgctctctatgcttctgtca 84
|||||||||||||||||| |||||||||
Sbjct: 65 actcctttgtgctctctagccttctgtca 93
>51599_ptc-miR156i:pmrd
Length = 99
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatg 28
||||||||||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcacagatgatg 39
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 54 tcactcctttgtgctctctatgcttctg 81
||||||||||||||||||||||||||||
Sbjct: 61 tcactcctttgtgctctctatgcttctg 88
>48630_gra-miR157a:pmrd
Length = 101
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatg 28
||||||||||||||||||||||||||||
Sbjct: 6 tgacagaagatagagagcacagatgatg 33
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 55 cactcctttgtgctctctatgcttctgtca 84
|||||||||||||||| |||||||||||||
Sbjct: 67 cactcctttgtgctctttatgcttctgtca 96
>46925_ath-miR157b:pmrd
Length = 132
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgat 27
|||||||||||||||||||||||||||
Sbjct: 20 tgacagaagatagagagcacagatgat 46
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 56 actcctttgtgctctctatgcttctgtca 84
|||||||||||||||||| |||||||||
Sbjct: 80 actcctttgtgctctctagccttctgtca 108
>46861_aqc-miR156a:pmrd
Length = 81
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatga 26
||||||||||||||||||||||||||
Sbjct: 1 tgacagaagatagagagcacagatga 26
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 60 ctttgtgctctctatgcttctgtca 84
|||||||||||||||||||||||||
Sbjct: 55 ctttgtgctctctatgcttctgtca 79
>48537_gma-miR157c:pmrd
Length = 84
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 1 tgacagaagatagagagcacagatgatga 29
|||||||||||||||||||| ||||||||
Sbjct: 83 tgacagaagatagagagcactgatgatga 55
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 54 tcactcctttgtgctctctatgcttctgtca 84
|||||||||||||||||||| |||||||||
Sbjct: 31 tcactcctttgtgctctctagtcttctgtca 1
>48532_gma-miR156e:pmrd
Length = 124
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatga 29
|||||||||||||||||||| ||||||||
Sbjct: 22 tgacagaagatagagagcactgatgatga 50
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 54 tcactcctttgtgctctctatgcttctgtca 84
|||||||||||||||||||| |||||||||
Sbjct: 74 tcactcctttgtgctctctagtcttctgtca 104
>54661_stu-miR157a:pmrd
Length = 91
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 61 tttgtgctctctatgcttctgtca 84
||||||||||||||||||||||||
Sbjct: 67 tttgtgctctctatgcttctgtca 90
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatgat 30
|||||||||||||||||||| ||||||||
Sbjct: 2 tgacagaagatagagagcactaatgatgat 31
>54532_sly-miR156a:pmrd
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 61 tttgtgctctctatgcttctgtca 84
||||||||||||||||||||||||
Sbjct: 76 tttgtgctctctatgcttctgtca 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatgat 30
|||||||||||||||||||| ||||||||
Sbjct: 2 tgacagaagatagagagcactaatgatgat 31
>54570_smo-miR156b:pmrd
Length = 112
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacaga 23
|||||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcacaga 34
>52807_ptc-miRf10985-akr:pmrd
Length = 87
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 54 tcactcctttgtgctctctatgcttctgtca 84
|||||||||||||||||||| |||||||||
Sbjct: 55 tcactcctttgtgctctctagtcttctgtca 85
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatga 29
|||||||||||||||||||| || |||||
Sbjct: 3 tgacagaagatagagagcactgacgatga 31
>51598_ptc-miR156h:pmrd
Length = 103
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 54 tcactcctttgtgctctctatgcttctgtca 84
|||||||||||||||||||| |||||||||
Sbjct: 64 tcactcctttgtgctctctagtcttctgtca 94
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcacagatgatga 29
|||||||||||||||||||| || |||||
Sbjct: 12 tgacagaagatagagagcactgacgatga 40
>46927_ath-miR157d:pmrd
Length = 221
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 58 tcctttgtgctctctatgcttctgtca 84
|||| ||||||||||||||||||||||
Sbjct: 167 tcctatgtgctctctatgcttctgtca 193
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 24 tgacagaagatagagagcac 43
>54771_vvi-miR156f:pmrd
Length = 105
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcaca 21
|||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcaca 32
>51552_pta-miR156b:pmrd
Length = 83
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcaca 21
|||||||||||||||||||||
Sbjct: 3 tgacagaagatagagagcaca 23
>51551_pta-miR156a:pmrd
Length = 83
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcaca 21
|||||||||||||||||||||
Sbjct: 3 tgacagaagatagagagcaca 23
>48696_mtr-miR156f:pmrd
Length = 94
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcaca 21
|||||||||||||||||||||
Sbjct: 7 tgacagaagatagagagcaca 27
>48675_lja-miR157a:pmrd
Length = 58
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcaca 21
|||||||||||||||||||||
Sbjct: 2 tgacagaagatagagagcaca 22
>48530_gma-miR156c:pmrd
Length = 185
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcaca 21
|||||||||||||||||||||
Sbjct: 147 tgacagaagatagagagcaca 167
>48384_bol-miR157a:pmrd
Length = 106
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 56 actcctttgtgctctctatgcttctgtca 84
|||| |||||||||||||| |||||||||
Sbjct: 73 actcttttgtgctctctatacttctgtca 101
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 7 tgacagaagatagagagcac 26
>48338_bna-miR156c:pmrd
Length = 155
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 56 actcctttgtgctctctatgcttctgtca 84
|||| |||||||||||||| |||||||||
Sbjct: 109 actcttttgtgctctctatacttctgtca 137
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 19 tgacagaagatagagagcac 38
>46926_ath-miR157c:pmrd
Length = 217
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 56 actcctttgtgctctctatgcttctgtca 84
|||| |||||||||||||| |||||||||
Sbjct: 160 actcttttgtgctctctatacttctgtca 188
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 25 tgacagaagatagagagcac 44
>54534_sly-miR156c:pmrd
Length = 83
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 2 tgacagaagatagagagcac 21
>54533_sly-miR156b:pmrd
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 2 tgacagaagatagagagcac 21
>48393_bra-miR157a:pmrd
Length = 149
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 15 tgacagaagatagagagcac 34
>48337_bna-miR156b:pmrd
Length = 208
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagcac 20
||||||||||||||||||||
Sbjct: 26 tgacagaagatagagagcac 45
>54537_sly-miR157c:pmrd
Length = 123
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagca 19
|||||||||||||||||||
Sbjct: 104 tgacagaagatagagagca 122
>54536_sly-miR157b:pmrd
Length = 430
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagca 19
|||||||||||||||||||
Sbjct: 2 tgacagaagatagagagca 20
>54535_sly-miR157a:pmrd
Length = 53
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagca 19
|||||||||||||||||||
Sbjct: 2 tgacagaagatagagagca 20
>51323_pco-miR157:pmrd
Length = 184
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagca 19
|||||||||||||||||||
Sbjct: 2 tgacagaagatagagagca 20
>48698_mtr-miR157:pmrd
Length = 111
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 58 tcctttgtgctctctatgcttctgtca 84
|||||||||||||||| |||||||||
Sbjct: 84 tcctttgtgctctctagacttctgtca 110
>48677_lja-miR157c:pmrd
Length = 460
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagca 19
|||||||||||||||||||
Sbjct: 2 tgacagaagatagagagca 20
>48670_ini-miR157b:pmrd
Length = 183
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagca 19
|||||||||||||||||||
Sbjct: 2 tgacagaagatagagagca 20
>48669_ini-miR157a:pmrd
Length = 126
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagca 19
|||||||||||||||||||
Sbjct: 2 tgacagaagatagagagca 20
>48668_iba-miR157:pmrd
Length = 283
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagatagagagca 19
|||||||||||||||||||
Sbjct: 2 tgacagaagatagagagca 20
