miRNEST 2.0, an integrative microRNA resource :: BLAST
>51610_ptc-miR160c:pmrd
Length = 98
Score = 95.6 bits (48), Expect = 4e-21
Identities = 70/76 (92%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccattttcagagcccatcggtatttccaatggcctccgtggat 60
||||||||||||||||||||||| ||||||||| |||| ||| | ||||||||||||||
Sbjct: 12 gcctggctccctgtatgccatttgcagagcccaccggttcttcga-tggcctccgtggat 70
Query: 61 ggcgtatgaggagcca 76
||||||||||||||||
Sbjct: 71 ggcgtatgaggagcca 86
>51609_ptc-miR160b:pmrd
Length = 98
Score = 87.7 bits (44), Expect = 1e-18
Identities = 69/76 (90%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccattttcagagcccatcggtatttccaatggcctccgtggat 60
||||||||||||||||||||||| ||||||||| ||| || | |||||||||||||||
Sbjct: 12 gcctggctccctgtatgccatttgcagagcccaacgg-atcctcgatggcctccgtggat 70
Query: 61 ggcgtatgaggagcca 76
||||||||||||||||
Sbjct: 71 ggcgtatgaggagcca 86
>54783_vvi-miR160f:pmrd
Length = 102
Score = 79.8 bits (40), Expect = 3e-16
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccattttcagagcccatcggtatttccaatggcctccgtggat 60
||||||||||||||||||||||| ||||||||| ||| | | | ||||||| |||||||
Sbjct: 12 gcctggctccctgtatgccatttgcagagcccaccggcacat-cgatggccttcgtggat 70
Query: 61 ggcgtatgaggagcca 76
||||||||||||||||
Sbjct: 71 ggcgtatgaggagcca 86
>47213_ath-miRf10113-akr:pmrd
Length = 85
Score = 69.9 bits (35), Expect = 2e-13
Identities = 68/77 (88%), Gaps = 4/77 (5%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccattttcagagcccatcg-gtatttccaatggcctccgtgga 59
||||||||||||||||||||| | | |||||||||| |||| | ||| ||||||||||
Sbjct: 5 gcctggctccctgtatgccatatgctgagcccatcgagtat---cgatgacctccgtgga 61
Query: 60 tggcgtatgaggagcca 76
|||||||||||||||||
Sbjct: 62 tggcgtatgaggagcca 78
>46934_ath-miR160a:pmrd
Length = 85
Score = 69.9 bits (35), Expect = 2e-13
Identities = 68/77 (88%), Gaps = 4/77 (5%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccattttcagagcccatcg-gtatttccaatggcctccgtgga 59
||||||||||||||||||||| | | |||||||||| |||| | ||| ||||||||||
Sbjct: 5 gcctggctccctgtatgccatatgctgagcccatcgagtat---cgatgacctccgtgga 61
Query: 60 tggcgtatgaggagcca 76
|||||||||||||||||
Sbjct: 62 tggcgtatgaggagcca 78
>48542_gma-miR160a:pmrd
Length = 119
Score = 56.0 bits (28), Expect = 4e-09
Identities = 69/81 (85%), Gaps = 5/81 (6%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccattttcagagcccatcg--gtatttccaatggcctccgtgg 58
||||||||||||||||||||||| ||||| ||||| | || ||||| ||| ||||
Sbjct: 22 gcctggctccctgtatgccatttgtagagctcatcgaagcat---caatgacctttgtgg 78
Query: 59 atggcgtatgaggagccaagc 79
|||||||||||||||||||||
Sbjct: 79 atggcgtatgaggagccaagc 99
>48704_mtr-miR160e:pmrd
Length = 91
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 55 gtggatggcgtatgaggagccaagc 79
|||||||||||||||||||||||||
Sbjct: 60 gtggatggcgtatgaggagccaagc 84
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccat 21
|||||||||||||||||||||
Sbjct: 7 gcctggctccctgtatgccat 27
>48702_mtr-miR160b:pmrd
Length = 91
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 55 gtggatggcgtatgaggagccaagc 79
|||||||||||||||||||||||||
Sbjct: 60 gtggatggcgtatgaggagccaagc 84
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccat 21
|||||||||||||||||||||
Sbjct: 7 gcctggctccctgtatgccat 27
>54781_vvi-miR160d:pmrd
Length = 102
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccattt 23
|||||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgccattt 34
>54541_sly-miR160a:pmrd
Length = 129
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccattt 23
|||||||||||||||||||||||
Sbjct: 21 gcctggctccctgtatgccattt 43
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 59 atggcgtatgaggagccaagc 79
|||||||||||||||||||||
Sbjct: 81 atggcgtatgaggagccaagc 101
>48703_mtr-miR160d:pmrd
Length = 91
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccattt 23
|||||||||||||||||||||||
Sbjct: 7 gcctggctccctgtatgccattt 29
>48397_bra-miR160a:pmrd
Length = 127
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 50 cctccgtggatggcgtatgaggagcca 76
|||||||| ||||||||||||||||||
Sbjct: 74 cctccgtgaatggcgtatgaggagcca 100
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccat 21
|||||||||||||||||||||
Sbjct: 27 gcctggctccctgtatgccat 47
>48396_bra-miR160a:pmrd
Length = 127
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 50 cctccgtggatggcgtatgaggagcca 76
|||||||| ||||||||||||||||||
Sbjct: 74 cctccgtgaatggcgtatgaggagcca 100
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccat 21
|||||||||||||||||||||
Sbjct: 27 gcctggctccctgtatgccat 47
>46865_aqc-miR160b:pmrd
Length = 82
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccattt 23
|||||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgccattt 24
>54574_smo-miR160a:pmrd
Length = 106
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgccat 21
|||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgccat 32
>54947_zma-miR160m:pmrd
Length = 81
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgcca 21
>54946_zma-miR160i:pmrd
Length = 81
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 3 gcctggctccctgtatgcca 22
>54945_zma-miR160h:pmrd
Length = 86
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgcca 21
>54944_zma-miR160g:pmrd
Length = 86
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgcca 21
>54942_zma-miR160e:pmrd
Length = 94
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 10 gcctggctccctgtatgcca 29
>54941_zma-miR160d:pmrd
Length = 142
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 22 gcctggctccctgtatgcca 41
>54940_zma-miR160c:pmrd
Length = 100
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 8 gcctggctccctgtatgcca 27
>54939_zma-miR160b:pmrd
Length = 121
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 22 gcctggctccctgtatgcca 41
>54938_zma-miR160a:pmrd
Length = 104
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 11 gcctggctccctgtatgcca 30
>54780_vvi-miR160c:pmrd
Length = 106
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>54759_ttu-miR160a:pmrd
Length = 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgcca 21
>54675_tae-miR160:pmrd
Length = 148
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 23 gcctggctccctgtatgcca 42
>54575_smo-miR160b:pmrd
Length = 108
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 14 gcctggctccctgtatgcca 33
>54408_sbi-miR160e:pmrd
Length = 95
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgcca 21
>54407_sbi-miR160d:pmrd
Length = 100
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgcca 21
>54406_sbi-miR160c:pmrd
Length = 83
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgcca 21
>54405_sbi-miR160b:pmrd
Length = 82
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgcca 21
>54404_sbi-miR160a:pmrd
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgcca 21
>53874_ptc-miRf12052-akr:pmrd
Length = 110
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 13 gcctggctccctgtatgcca 32
>51611_ptc-miR160d:pmrd
Length = 103
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>51608_ptc-miR160a:pmrd
Length = 102
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>51367_ppt-miR160i:pmrd
Length = 139
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgcca 50
>51364_ppt-miR160f:pmrd
Length = 138
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgcca 50
>51363_ppt-miR160e:pmrd
Length = 138
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgcca 50
>51360_ppt-miR160b:pmrd
Length = 103
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>51359_ppt-miR160a:pmrd
Length = 99
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>51334_pga-miR160:pmrd
Length = 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgcca 21
>48833_osa-miR160n:pmrd
Length = 131
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgcca 21
>48832_osa-miR160m:pmrd
Length = 82
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 2 gcctggctccctgtatgcca 21
>48829_osa-miR160d:pmrd
Length = 142
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 9 gcctggctccctgtatgcca 28
>48828_osa-miR160c:pmrd
Length = 99
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 8 gcctggctccctgtatgcca 27
>48827_osa-miR160b:pmrd
Length = 139
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgcca 50
>48826_osa-miR160a:pmrd
Length = 88
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 5 gcctggctccctgtatgcca 24
>48791_oba-miR160:pmrd
Length = 90
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 5 gcctggctccctgtatgcca 24
>48658_hvv-miR160a:pmrd
Length = 344
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 325 gcctggctccctgtatgcca 344
>47338_ath-miRf10238-akr:pmrd
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 6 gcctggctccctgtatgcca 25
>46936_ath-miR160c:pmrd
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 6 gcctggctccctgtatgcca 25
>46935_ath-miR160b:pmrd
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcctggctccctgtatgcca 20
||||||||||||||||||||
Sbjct: 6 gcctggctccctgtatgcca 25
