miRNEST 2.0, an integrative microRNA resource :: BLAST
>46909_ata-miR1122:pmrd
Length = 170
Score = 79.8 bits (40), Expect = 4e-16
Identities = 100/118 (84%), Gaps = 2/118 (1%)
Strand = Plus / Plus
Query: 1 tactccctccgtccgaaaatagttgtcttcgaaatgaatgtatctagacttaattntagt 60
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Sbjct: 26 tactccctccgtccgaaattatttgtcggagaaatggatgtatctagacgt-attttagt 84
Query: 61 tatagatacatcca-ttntatttatttctaggacaagtatttccggacggagggagta 117
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Sbjct: 85 tctagatacatccatttttatccatttctgcaacaagtagttccggacggagggagta 142
>54703_tae-miR1128:pmrd
Length = 188
Score = 54.0 bits (27), Expect = 2e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 1 tactccctccgtccgaaaatagttgtcttcgaaatgaat 39
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Sbjct: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaat 72
Score = 48.1 bits (24), Expect = 1e-06
Identities = 56/66 (84%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 53 attntagttatagatacatcca-ttntatttatttctaggacaagtatttccggacggag 111
||| ||||| ||||||||||| || |||| |||| | ||||||||||| |||||||||
Sbjct: 99 attttagttctagatacatccccttttattcattttgatgacaagtattttcggacggag 40
Query: 112 ggagta 117
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Sbjct: 39 ggagta 34
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 1 tactccctccgtccgaaaatagttgtcttcgaaatg 36
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Sbjct: 160 tactccctccgtccggaaatagttgtcatcaaaatg 125
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 91 gacaagtatttccggacggagggagta 117
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Sbjct: 134 gacaactatttccggacggagggagta 160
>54702_tae-miR1127:pmrd
Length = 150
Score = 46.1 bits (23), Expect = 6e-06
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 53 attntagttatagatacatccattntatttatttctaggacaagtatttccggacggagg 112
||| ||||| |||||||||||||| | | |||| | |||||||| ||||| |||||||
Sbjct: 70 attttagttgtagatacatccatttttatcatttttgtgacaagtaattccgaacggagg 129
Query: 113 gagta 117
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Sbjct: 130 gagta 134
>54757_tmo-miR1122:pmrd
Length = 180
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 tactccctccgtccgaaaatagttgtctt 29
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Sbjct: 26 tactccctccgtcccaaaattgttgtctt 54
>54710_tae-miR1135:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 4e-04
Identities = 62/75 (82%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 1 tactccctccgtccgaaaatagttgtcttcgaaatgaatgtatctagacttaattntagt 60
|||||||||||| || || || ||||| ||||| |||||||||||| || || ||||
Sbjct: 108 tactccctccgttcggaattacttgtcgcagaaatagatgtatctagacgta-ttttagt 50
Query: 61 tatagatacatccat 75
| |||||||||||||
Sbjct: 49 tctagatacatccat 35
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 82 tatttctaggacaagtatttccggacggagggagta 117
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Sbjct: 73 tatttctgcgacaagtaattccgaacggagggagta 108
