miRNEST 2.0, an integrative microRNA resource :: BLAST
>48493_ghr-miR162a:pmrd
Length = 148
Score = 105 bits (53), Expect = 5e-24
Identities = 85/93 (91%), Gaps = 2/93 (2%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatcactttgtgcaaattttgttgtgaaaaataacacaaaa 60
||||||||||||||||||||||| ||| || ||||||||||||| || |||||||||
Sbjct: 24 ctggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaa-taacacaaa- 81
Query: 61 tacatgaatcgatcgataaacctctgcatccag 93
|||||||||||||||||||||||||||||||||
Sbjct: 82 tacatgaatcgatcgataaacctctgcatccag 114
>54387_rco-miR162:pmrd
Length = 96
Score = 83.8 bits (42), Expect = 2e-17
Identities = 83/94 (88%), Gaps = 2/94 (2%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatcactttgtgcaa-attttgttgtgaaaaataacacaaa 59
||||||||||||||||||||||| ||| || || |||||||||||||| | || | |||
Sbjct: 3 ctggaggcagcggttcatcgatctcttcctggaagattttgttgtgaaacaaaa-ataaa 61
Query: 60 atacatgaatcgatcgataaacctctgcatccag 93
| |||||||||||||||||||||||||||||||
Sbjct: 62 acgcatgaatcgatcgataaacctctgcatccag 95
>48423_cpa-miR162a:pmrd
Length = 109
Score = 71.9 bits (36), Expect = 8e-14
Identities = 80/93 (86%), Gaps = 5/93 (5%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatcactttgtgcaaattttgttgtgaaaaataacacaaaa 60
||||||||||||||||||||||| ||| || ||||| || ||||||||| ||| ||
Sbjct: 13 ctggaggcagcggttcatcgatctcttcctgggaatttggt-gtgaaaaatcacagaa-- 69
Query: 61 tacatgaatcgatcgataaacctctgcatccag 93
|||||||||||||||||||||||||||||||
Sbjct: 70 --catgaatcgatcgataaacctctgcatccag 100
>48682_llu-miR162:pmrd
Length = 80
Score = 61.9 bits (31), Expect = 7e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 63 catgaatcgatcgataaacctctgcatccag 93
|||||||||||||||||||||||||||||||
Sbjct: 50 catgaatcgatcgataaacctctgcatccag 80
>48545_gma-miR162a:pmrd
Length = 102
Score = 61.9 bits (31), Expect = 7e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 63 catgaatcgatcgataaacctctgcatccag 93
|||||||||||||||||||||||||||||||
Sbjct: 63 catgaatcgatcgataaacctctgcatccag 93
>52400_ptc-miRf10578-akr:pmrd
Length = 103
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 62 acatgaatcgatcgataaacctctgcatccag 93
||||||| ||||||||||||||||||||||||
Sbjct: 39 acatgaaccgatcgataaacctctgcatccag 8
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1 ctggaggcagcggttcatcgatc 23
|||||||||||||||||||||||
Sbjct: 95 ctggaggcagcggttcatcgatc 73
>52399_ptc-miRf10577-akr:pmrd
Length = 103
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 62 acatgaatcgatcgataaacctctgcatccag 93
||||||| ||||||||||||||||||||||||
Sbjct: 39 acatgaaccgatcgataaacctctgcatccag 8
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1 ctggaggcagcggttcatcgatc 23
|||||||||||||||||||||||
Sbjct: 95 ctggaggcagcggttcatcgatc 73
>51616_ptc-miR162a:pmrd
Length = 107
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 62 acatgaatcgatcgataaacctctgcatccag 93
||||||| ||||||||||||||||||||||||
Sbjct: 67 acatgaaccgatcgataaacctctgcatccag 98
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatc 23
|||||||||||||||||||||||
Sbjct: 11 ctggaggcagcggttcatcgatc 33
>48834_osa-miR162a:pmrd
Length = 171
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 66 gaatcgatcgataaacctctgcatccag 93
||||||||||||||||||||||||||||
Sbjct: 136 gaatcgatcgataaacctctgcatccag 163
>48707_mtr-miR162d:pmrd
Length = 87
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 62 acatgaatcgatcgataaacctctgcatccag 93
|||||||||| |||||||||||||||||||||
Sbjct: 56 acatgaatcggtcgataaacctctgcatccag 87
>47354_ath-miRf10254-akr:pmrd
Length = 115
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 66 gaatcgatcgataaacctctgcatccag 93
||||||||||||||||||||||||||||
Sbjct: 42 gaatcgatcgataaacctctgcatccag 15
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 1 ctggaggcagcggttcatcgatca 24
||||||||||||||||||||||||
Sbjct: 102 ctggaggcagcggttcatcgatca 79
>46938_ath-miR162b:pmrd
Length = 111
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 66 gaatcgatcgataaacctctgcatccag 93
||||||||||||||||||||||||||||
Sbjct: 72 gaatcgatcgataaacctctgcatccag 99
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatca 24
||||||||||||||||||||||||
Sbjct: 12 ctggaggcagcggttcatcgatca 35
>48706_mtr-miR162c:pmrd
Length = 86
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 62 acatgaatcgatcgataaacctctgcatcca 92
|||||||||| ||||||||||||||||||||
Sbjct: 31 acatgaatcggtcgataaacctctgcatcca 1
>48705_mtr-miR162b:pmrd
Length = 85
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 62 acatgaatcgatcgataaacctctgcatcca 92
|||||||||| ||||||||||||||||||||
Sbjct: 55 acatgaatcggtcgataaacctctgcatcca 85
>46937_ath-miR162a:pmrd
Length = 140
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 63 catgaatcgatcgataaacctctgcatccag 93
||||||| |||||||||||||||||||||||
Sbjct: 79 catgaatagatcgataaacctctgcatccag 109
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatc 23
|||||||||||||||||||||||
Sbjct: 25 ctggaggcagcggttcatcgatc 47
>54948_zma-miR162b:pmrd
Length = 130
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 66 gaatcgatcgataaacctctgcatccag 93
|||||| |||||||||||||||||||||
Sbjct: 103 gaatcggtcgataaacctctgcatccag 130
>54784_vvi-miR162:pmrd
Length = 103
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 66 gaatcgatcgataaacctctgcatccag 93
|||||| |||||||||||||||||||||
Sbjct: 66 gaatcggtcgataaacctctgcatccag 93
>54542_sly-miR162:pmrd
Length = 99
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 66 gaatcgatcgataaacctctgcatccag 93
|||||| |||||||||||||||||||||
Sbjct: 72 gaatcggtcgataaacctctgcatccag 99
>52498_ptc-miRf10676-akr:pmrd
Length = 101
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 70 cgatcgataaacctctgcatccag 93
||||||||||||||||||||||||
Sbjct: 30 cgatcgataaacctctgcatccag 7
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1 ctggaggcagcggttcatcgatc 23
|||||||||||||||||||||||
Sbjct: 94 ctggaggcagcggttcatcgatc 72
>52497_ptc-miRf10675-akr:pmrd
Length = 105
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 70 cgatcgataaacctctgcatccag 93
||||||||||||||||||||||||
Sbjct: 32 cgatcgataaacctctgcatccag 9
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1 ctggaggcagcggttcatcgatc 23
|||||||||||||||||||||||
Sbjct: 96 ctggaggcagcggttcatcgatc 74
>52244_ptc-miRf10422-akr:pmrd
Length = 105
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 70 cgatcgataaacctctgcatccag 93
||||||||||||||||||||||||
Sbjct: 32 cgatcgataaacctctgcatccag 9
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1 ctggaggcagcggttcatcgatc 23
|||||||||||||||||||||||
Sbjct: 96 ctggaggcagcggttcatcgatc 74
>52243_ptc-miRf10421-akr:pmrd
Length = 101
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 70 cgatcgataaacctctgcatccag 93
||||||||||||||||||||||||
Sbjct: 30 cgatcgataaacctctgcatccag 7
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1 ctggaggcagcggttcatcgatc 23
|||||||||||||||||||||||
Sbjct: 94 ctggaggcagcggttcatcgatc 72
>51618_ptc-miR162c:pmrd
Length = 107
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 70 cgatcgataaacctctgcatccag 93
||||||||||||||||||||||||
Sbjct: 75 cgatcgataaacctctgcatccag 98
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatc 23
|||||||||||||||||||||||
Sbjct: 11 ctggaggcagcggttcatcgatc 33
>51617_ptc-miR162b:pmrd
Length = 107
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 70 cgatcgataaacctctgcatccag 93
||||||||||||||||||||||||
Sbjct: 75 cgatcgataaacctctgcatccag 98
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatc 23
|||||||||||||||||||||||
Sbjct: 11 ctggaggcagcggttcatcgatc 33
>48836_osa-miR162m:pmrd
Length = 114
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 66 gaatcgatcgataaacctctgcatccag 93
|||||||||||||| |||||||||||||
Sbjct: 87 gaatcgatcgataagcctctgcatccag 114
>48835_osa-miR162b:pmrd
Length = 134
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 66 gaatcgatcgataaacctctgcatccag 93
|||||||||||||| |||||||||||||
Sbjct: 97 gaatcgatcgataagcctctgcatccag 124
>48690_mdo-miR162:pmrd
Length = 88
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 63 catgaatcgatcgataaacctctgcatccag 93
||||||||| ||||||||||| |||||||||
Sbjct: 58 catgaatcggtcgataaacctttgcatccag 88
>48685_lsa-miR162:pmrd
Length = 89
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 73 tcgataaacctctgcatccag 93
|||||||||||||||||||||
Sbjct: 1 tcgataaacctctgcatccag 21
>48546_gma-miR162m:pmrd
Length = 367
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 73 tcgataaacctctgcatccag 93
|||||||||||||||||||||
Sbjct: 1 tcgataaacctctgcatccag 21
