miRNEST 2.0, an integrative microRNA resource :: BLAST
>54695_tae-miR1120:pmrd
Length = 119
Score = 85.7 bits (43), Expect = 5e-18
Identities = 75/85 (88%), Gaps = 3/85 (3%)
Strand = Plus / Minus
Query: 1 tactccctccgtctcaaaatataagagcgtttttggcactacactagtgtaaaaaatgct 60
|||||||||||||||| ||||||||| ||||||| |||||||| ||| ||||||| |
Sbjct: 99 tactccctccgtctcataatataagaatgtttttgacactacac---tgtcaaaaatgtt 43
Query: 61 cttatattttgggacggagggagta 85
|||||||| ||||||||||||||||
Sbjct: 42 cttatattatgggacggagggagta 18
Score = 40.1 bits (20), Expect = 2e-04
Identities = 70/86 (81%), Gaps = 3/86 (3%)
Strand = Plus / Plus
Query: 1 tactccctccgtctcaaaatataagagcgtttttggcactacactagtgtaaaaaatgct 60
||||||||||||| || ||||||||| | |||||| || | |||||| ||||| |
Sbjct: 18 tactccctccgtcccataatataagaacatttttgacagt---gtagtgtcaaaaacatt 74
Query: 61 cttatattttgggacggagggagtat 86
|||||||| || ||||||||||||||
Sbjct: 75 cttatattatgagacggagggagtat 100
>49818_osa-miRf10603-akr:pmrd
Length = 97
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 61 cttatattttgggacggagggagta 85
|||||||||||||||||||||||||
Sbjct: 68 cttatattttgggacggagggagta 92
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 61 cttatattttgggacggagggagta 85
||||||||||||||||||| |||||
Sbjct: 30 cttatattttgggacggagagagta 6
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1 tactccctccgtctcaaaatataag 25
||||||||||||| |||||||||||
Sbjct: 92 tactccctccgtcccaaaatataag 68
>49537_osa-miRf10322-akr:pmrd
Length = 105
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 62 ttatattttgggacggagggagtat 86
|||||||||||||||||||||||||
Sbjct: 33 ttatattttgggacggagggagtat 9
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 61 cttatattttgggacggagggagta 85
||||||||| |||||||||||||||
Sbjct: 72 cttatatttcgggacggagggagta 96
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 tactccctccgtctcaaaatataa 24
||||||||||||| ||||||||||
Sbjct: 10 tactccctccgtcccaaaatataa 33
>49536_osa-miRf10321-akr:pmrd
Length = 105
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 62 ttatattttgggacggagggagtat 86
|||||||||||||||||||||||||
Sbjct: 33 ttatattttgggacggagggagtat 9
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 61 cttatattttgggacggagggagta 85
||||||||| |||||||||||||||
Sbjct: 72 cttatatttcgggacggagggagta 96
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 tactccctccgtctcaaaatataa 24
||||||||||||| ||||||||||
Sbjct: 10 tactccctccgtcccaaaatataa 33
>50920_osa-miRf11705-akr:pmrd
Length = 134
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 62 ttatattttgggacggagggagta 85
||||||||||||||||||||||||
Sbjct: 99 ttatattttgggacggagggagta 122
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1 tactccctccgtctcaaaatataa 24
||||||||||||| ||||||||||
Sbjct: 122 tactccctccgtcccaaaatataa 99
>49958_osa-miRf10743-akr:pmrd
Length = 122
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 63 tatattttgggacggagggagtat 86
||||||||||||||||||||||||
Sbjct: 34 tatattttgggacggagggagtat 11
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 63 tatattttgggacggagggagta 85
|||||||||||||||||||||||
Sbjct: 88 tatattttgggacggagggagta 110
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 tactccctccgtctcaaaatata 23
||||||||||||| |||||||||
Sbjct: 12 tactccctccgtcccaaaatata 34
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1 tactccctccgtctcaaaatata 23
||||||||||||| |||||||||
Sbjct: 110 tactccctccgtcccaaaatata 88
>49957_osa-miRf10742-akr:pmrd
Length = 128
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 63 tatattttgggacggagggagtat 86
||||||||||||||||||||||||
Sbjct: 93 tatattttgggacggagggagtat 116
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 63 tatattttgggacggagggagta 85
|||||||||||||||||||||||
Sbjct: 39 tatattttgggacggagggagta 17
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 tactccctccgtctcaaaatata 23
||||||||||||| |||||||||
Sbjct: 17 tactccctccgtcccaaaatata 39
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1 tactccctccgtctcaaaatata 23
||||||||||||| |||||||||
Sbjct: 115 tactccctccgtcccaaaatata 93
>49517_osa-miRf10302-akr:pmrd
Length = 103
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 63 tatattttgggacggagggagtat 86
||||||||||||||||||||||||
Sbjct: 29 tatattttgggacggagggagtat 6
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 63 tatattttgggacggagggagtat 86
||||||||||||||||||||||||
Sbjct: 75 tatattttgggacggagggagtat 98
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 tactccctccgtctcaaaatata 23
||||||||||||| |||||||||
Sbjct: 7 tactccctccgtcccaaaatata 29
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1 tactccctccgtctcaaaatata 23
||||||||||||| |||||||||
Sbjct: 97 tactccctccgtcccaaaatata 75
>49366_osa-miRf10151-akr:pmrd
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 63 tatattttgggacggagggagtat 86
||||||||||||||||||||||||
Sbjct: 57 tatattttgggacggagggagtat 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 63 tatattttgggacggagggagtat 86
|||||||||||||||||| |||||
Sbjct: 26 tatattttgggacggaggtagtat 3
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1 tactccctccgtctcaaaatata 23
||||||||||||| |||||||||
Sbjct: 79 tactccctccgtcccaaaatata 57
>49314_osa-miRf10099-akr:pmrd
Length = 144
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 63 tatattttgggacggagggagta 85
|||||||||||||||||||||||
Sbjct: 36 tatattttgggacggagggagta 14
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 tactccctccgtctcaaaatata 23
||||||||||||| |||||||||
Sbjct: 14 tactccctccgtcccaaaatata 36
>51250_osa-miRf12035-akr:pmrd
Length = 119
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 61 cttatattttgggacggagggagtat 86
|||||||| |||||||||||||||||
Sbjct: 89 cttatattatgggacggagggagtat 114
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 61 cttatattttgggacggagggagta 85
|||||||| ||||||||||||||||
Sbjct: 34 cttatattatgggacggagggagta 10
>50738_osa-miRf11523-akr:pmrd
Length = 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 61 cttatattttgggacggagggagtat 86
|||||||| |||||||||||||||||
Sbjct: 73 cttatattatgggacggagggagtat 98
>50305_osa-miRf11090-akr:pmrd
Length = 116
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 61 cttatattttgggacggagggagtat 86
||||||||||||||| ||||||||||
Sbjct: 84 cttatattttgggacagagggagtat 109
>49712_osa-miRf10497-akr:pmrd
Length = 172
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 61 cttatattttgggacggagggagtat 86
||||||||| ||||||||||||||||
Sbjct: 26 cttatatttagggacggagggagtat 1
>49156_osa-miR1862e:pmrd
Length = 93
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 65 tattttgggacggagggagtat 86
||||||||||||||||||||||
Sbjct: 71 tattttgggacggagggagtat 92
>49155_osa-miR1862d:pmrd
Length = 150
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 65 tattttgggacggagggagtat 86
||||||||||||||||||||||
Sbjct: 102 tattttgggacggagggagtat 123
>49152_osa-miR1862a:pmrd
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 65 tattttgggacggagggagtat 86
||||||||||||||||||||||
Sbjct: 67 tattttgggacggagggagtat 88
>48648_hpr-miR1120:pmrd
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 65 tattttgggacggagggagtat 86
||||||||||||||||||||||
Sbjct: 60 tattttgggacggagggagtat 81
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 65 tattttgggacggagggagta 85
|||||||||||||||||||||
Sbjct: 26 tattttgggacggagggagta 6
