miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>49347_osa-miRf10132-akr:pmrd
          Length = 145

 Score =  272 bits (137), Expect = 7e-74
 Identities = 143/145 (98%)
 Strand = Plus / Plus

                                                                       
Query: 4   tcggagacggcgtgcttggcgagctcgccggggaggacaaggcggacggaggtctggatc 63
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1   tcggagacggcgtgcttggcgagctcgccggggaggacgaggcggacggaggtctggatc 60

                                                                       
Query: 64  tcgcgggaggtgatggtgggcttcttgttgtaacgggcgagcttggcggactccccggcg 123
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 61  tcgcgggaggtgatggtgggcttcttgttgtagcgggcgagcttggcggactccccggcg 120

                                    
Query: 124 agcttctcgaagatgtcgttgatga 148
           |||||||||||||||||||||||||
Sbjct: 121 agcttctcgaagatgtcgttgatga 145




>49359_osa-miRf10144-akr:pmrd
          Length = 151

 Score =  258 bits (130), Expect = 1e-69
 Identities = 145/150 (96%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccctcggagacggcgtgcttggcgagctcgccggggaggacaaggcggacggaggtctgg 60
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1   ccctcggagacggcgtgcttggcgagctcgccggggaggacgaggcggacggaggtctgg 60

                                                                       
Query: 61  atctcgcgggaggtgatggtgggcttcttgttgtaacgggcgagcttggcggactccccg 120
           ||||| || |||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 61  atctcccgtgaggtgatggtgggcttcttgttgtagcgcgcgagcttggcggactccccg 120

                                         
Query: 121 gcgagcttctcgaagatgtcgttgatgaag 150
           ||||||||||||||||||||||||||||||
Sbjct: 121 gcgagcttctcgaagatgtcgttgatgaag 150