miRNEST 2.0, an integrative microRNA resource :: BLAST
>49822_osa-miRf10607-akr:pmrd
Length = 137
Score = 101 bits (51), Expect = 2e-22
Identities = 119/139 (85%), Gaps = 2/139 (1%)
Strand = Plus / Minus
Query: 13 ggcgctgaacttagacacttcagcgccatgtccactggcgctggaaggcgtgccaccgcg 72
||||||||| |||||||| ||||||||||||| |||||||||| | | ||| |||||| |
Sbjct: 137 ggcgctgaatttagacacctcagcgccatgtcaactggcgctgaatgccgtaccaccgtg 78
Query: 73 gatgggagactaagtcaccttgccaatgcatatttagcgtccccctatttgggcgctgag 132
||||||||||||||||| | | |||| | |||||||| | | | |||||| |||||||||
Sbjct: 77 gatgggagactaagtcagcgtaccaacgtatatttagtgccacgctattt-ggcgctgag 19
Query: 133 gtgtcttaggttcagcgcc 151
||||| || ||||||||||
Sbjct: 18 gtgtc-taagttcagcgcc 1
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 13 ggcgctgaacttagacacttcagcgcca 40
|||||||||||||||||| |||||||||
Sbjct: 1 ggcgctgaacttagacacctcagcgcca 28
>49843_osa-miRf10628-akr:pmrd
Length = 159
Score = 81.8 bits (41), Expect = 1e-16
Identities = 114/137 (83%), Gaps = 1/137 (0%)
Strand = Plus / Plus
Query: 2 ccaaatccccgggcgctgaacttagacacttcagcgccatgtccactggcgctggaaggc 61
||||||| || ||||||||||||||||| ||||||||| ||| |||| || || | | |
Sbjct: 1 ccaaatcacctggcgctgaacttagacatctcagcgccacgtcaactgacgttgaatgcc 60
Query: 62 gtgccaccgcggatgggagactaagtcaccttgccaatgcatatttagcgtccccctatt 121
|||||||||||||| |||||||| ||| |||||| |||||||||||| | | |||||
Sbjct: 61 gtgccaccgcggataagagactaaatcagagtgccaacgcatatttagcgccacgctatt 120
Query: 122 tgggcgctgaggtgtct 138
| ||||||||||||||
Sbjct: 121 t-agcgctgaggtgtct 136
>50564_osa-miRf11349-akr:pmrd
Length = 139
Score = 67.9 bits (34), Expect = 2e-12
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 13 ggcgctgaacttagacacttcagcgccatgtccactggcgctggaaggcgtgccaccgcg 72
|||| |||| |||||||| |||||| || ||| |||| ||||| | | ||||||||||||
Sbjct: 20 ggcgttgaatttagacacctcagcgtcacgtcaactgtcgctgaatgccgtgccaccgcg 79
Query: 73 gatgggagactaagtcaccttgccaa 98
|||||||| |||||||| | ||||||
Sbjct: 80 gatgggaggctaagtcagcgtgccaa 105
>50085_osa-miRf10870-akr:pmrd
Length = 163
Score = 67.9 bits (34), Expect = 2e-12
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 13 ggcgctgaacttagacacttcagcgccatgtccactggcgctggaaggcgtgccaccgcg 72
|||||||||||||||||| |||| | || ||| |||||||||| | |||||||||| |
Sbjct: 14 ggcgctgaacttagacacctcagtgtcacgtcaactggcgctgaataccgtgccaccgtg 73
Query: 73 gatgggagactaagtcaccttgccaa 98
|||||||| |||||||| | ||||||
Sbjct: 74 gatgggaggctaagtcagcgtgccaa 99
>49236_osa-miRf10021-akr:pmrd
Length = 109
Score = 63.9 bits (32), Expect = 3e-11
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 27 acacttcagcgccatgtccactggcgctggaaggcgtgccaccgcggatgggagactaag 86
|||| ||||||||||||| |||||||||| | | ||| |||||| ||||||||| |||||
Sbjct: 1 acacctcagcgccatgtcaactggcgctgaatgccgtaccaccgtggatgggaggctaag 60
Query: 87 tcaccttgccaa 98
||| | ||||||
Sbjct: 61 tcagcatgccaa 72
>49235_osa-miRf10020-akr:pmrd
Length = 111
Score = 63.9 bits (32), Expect = 3e-11
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 27 acacttcagcgccatgtccactggcgctggaaggcgtgccaccgcggatgggagactaag 86
|||| ||||||||||||| |||||||||| | | ||| |||||| ||||||||| |||||
Sbjct: 110 acacctcagcgccatgtcaactggcgctgaatgccgtaccaccgtggatgggaggctaag 51
Query: 87 tcaccttgccaa 98
||| | ||||||
Sbjct: 50 tcagcatgccaa 39
>49258_osa-miRf10043-akr:pmrd
Length = 115
Score = 61.9 bits (31), Expect = 1e-10
Identities = 95/115 (82%), Gaps = 1/115 (0%)
Strand = Plus / Plus
Query: 24 tagacacttcagcgccatgtccactggcgctggaaggcgtgccaccgcggatgggagact 83
||||||| ||||||||| ||| |||||||||| | | |||||||| ||||| |||| ||
Sbjct: 1 tagacacctcagcgccacgtcgactggcgctgaatgtcgtgccactgcggacaggaggct 60
Query: 84 aagtcaccttgccaatgcatatttagcgtccccctatttgggcgctgaggtgtct 138
|||||| | |||||| | | ||| |||| | | |||||||| |||||||||||||
Sbjct: 61 aagtcaacatgccaacgaacattcagcgccacgctatttgg-cgctgaggtgtct 114
>50367_osa-miRf11152-akr:pmrd
Length = 116
Score = 60.0 bits (30), Expect = 5e-10
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 24 tagacacttcagcgccatgtccactggcgctggaaggcgtgccaccgcggatgggagact 83
||||||| ||||||||| ||| ||||||||| | | |||||||| ||||||||||||||
Sbjct: 1 tagacacctcagcgccacgtcatctggcgctgaatgccgtgccacggcggatgggagact 60
Query: 84 aa 85
||
Sbjct: 61 aa 62
>50595_osa-miRf11380-akr:pmrd
Length = 115
Score = 58.0 bits (29), Expect = 2e-09
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 24 tagacacttcagcgccatgtccactggcgctggaaggcgtgccaccgcggatgggagact 83
||||||| ||||||||| ||| ||||||||| | | ||||||||||||||||||||||
Sbjct: 1 tagacacctcagcgccacgtcaactggcgctaaatgctgtgccaccgcggatgggagact 60
Query: 84 aagtc 88
||||
Sbjct: 61 gagtc 65
>51258_osa-miRf12043-akr:pmrd
Length = 109
Score = 56.0 bits (28), Expect = 8e-09
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 27 acacttcagcgccatgtccactggcgctggaaggcgtgccaccgcggatgggagactaag 86
|||| ||||||||| ||| |||||||||| | | | ||||||||||||||||| |||||
Sbjct: 1 acacctcagcgccacgtcaactggcgctgaatgctgagccaccgcggatgggaggctaag 60
Query: 87 tcaccttgccaa 98
||| | ||||||
Sbjct: 61 tcagcgtgccaa 72
>49839_osa-miRf10624-akr:pmrd
Length = 137
Score = 56.0 bits (28), Expect = 8e-09
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 13 ggcgctgaacttagacacttcagcgccatgtccactggcgctggaaggcgtgccaccgcg 72
|||||||||||||||||| ||||||||| ||| ||||| || | | |||||||||| |
Sbjct: 137 ggcgctgaacttagacacctcagcgccacgtcaactggaattgaatgtcgtgccaccgtg 78
Query: 73 gatgggag 80
||||||||
Sbjct: 77 gatgggag 70
>49838_osa-miRf10623-akr:pmrd
Length = 141
Score = 56.0 bits (28), Expect = 8e-09
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 13 ggcgctgaacttagacacttcagcgccatgtccactggcgctggaaggcgtgccaccgcg 72
|||||||||||||||||| ||||||||| ||| ||||| || | | |||||||||| |
Sbjct: 139 ggcgctgaacttagacacctcagcgccacgtcaactggaattgaatgtcgtgccaccgtg 80
Query: 73 gatgggag 80
||||||||
Sbjct: 79 gatgggag 72
>50557_osa-miRf11342-akr:pmrd
Length = 115
Score = 54.0 bits (27), Expect = 3e-08
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 32 tcagcgccatgtccactggcgctggaaggcgtgccaccgcggatgggagactaagtcacc 91
||||||||| ||| |||||||||| | | |||||||| |||||||||||||| |||| |
Sbjct: 9 tcagcgccacgtcaactggcgctgaatgccgtgccacgacggatgggagactatgtcagc 68
Query: 92 ttgccaa 98
||||||
Sbjct: 69 gtgccaa 75
>49840_osa-miRf10625-akr:pmrd
Length = 135
Score = 54.0 bits (27), Expect = 3e-08
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 14 gcgctgaacttagacacttcagcgccatgtccactggcgctggaaggcgtgccaccgcgg 73
||||||||||||||||| ||||||||| ||| ||||| || | | |||||||||| ||
Sbjct: 1 gcgctgaacttagacacctcagcgccacgtcaactggaattgaatgtcgtgccaccgtgg 60
Query: 74 atgggag 80
|||||||
Sbjct: 61 atgggag 67
>50676_osa-miRf11461-akr:pmrd
Length = 109
Score = 52.0 bits (26), Expect = 1e-07
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 27 acacttcagcgccatgtccactggcgctggaaggcgtgccaccgcggatgggag 80
|||| ||||||||| ||| ||||| |||| | | ||||||||||||||||||||
Sbjct: 1 acacctcagcgccacgtcaactggtgctgaatgccgtgccaccgcggatgggag 54
>50651_osa-miRf11436-akr:pmrd
Length = 155
Score = 52.0 bits (26), Expect = 1e-07
Identities = 80/98 (81%)
Strand = Plus / Plus
Query: 14 gcgctgaacttagacacttcagcgccatgtccactggcgctggaaggcgtgccaccgcgg 73
||||||||| ||||||||||| ||||| ||| | || ||||| | | ||||| ||| |||
Sbjct: 11 gcgctgaacatagacacttcaacgccacgtcaattgacgctgaatgccgtgctaccacgg 70
Query: 74 atgggagactaagtcaccttgccaatgcatatttagcg 111
||| || |||||||| | |||||||| | ||||||||
Sbjct: 71 atgaaaggctaagtcagcgtgccaatgaacatttagcg 108
>50094_osa-miRf10879-akr:pmrd
Length = 115
Score = 52.0 bits (26), Expect = 1e-07
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 24 tagacacttcagcgccatgtccactggcgctggaaggcgtgccaccgcggatgg 77
||||||||||||||||| ||| |||||||||| | | |||||| |||||||||
Sbjct: 1 tagacacttcagcgccacgtcaactggcgctgaatgctgtgccaacgcggatgg 54
>49663_osa-miRf10448-akr:pmrd
Length = 159
Score = 52.0 bits (26), Expect = 1e-07
Identities = 71/86 (82%)
Strand = Plus / Minus
Query: 13 ggcgctgaacttagacacttcagcgccatgtccactggcgctggaaggcgtgccaccgcg 72
||||| || ||||||||| ||||||||| ||| ||||| || | | | |||||| |||
Sbjct: 148 ggcgcggaccttagacacctcagcgccacgtcagctggctttgaatgccatgccacggcg 89
Query: 73 gatgggagactaagtcaccttgccaa 98
||||||||||||||||| | ||||||
Sbjct: 88 gatgggagactaagtcagcgtgccaa 63
>49311_osa-miRf10096-akr:pmrd
Length = 131
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 13 ggcgctgaacttagacacttcagcgcca 40
|||||||||||||||||| |||||||||
Sbjct: 1 ggcgctgaacttagacacctcagcgcca 28
>49310_osa-miRf10095-akr:pmrd
Length = 131
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 13 ggcgctgaacttagacacttcagcgcca 40
|||||||||||||||||| |||||||||
Sbjct: 1 ggcgctgaacttagacacctcagcgcca 28
>51059_osa-miRf11844-akr:pmrd
Length = 115
Score = 46.1 bits (23), Expect = 8e-06
Identities = 93/115 (80%), Gaps = 1/115 (0%)
Strand = Plus / Plus
Query: 24 tagacacttcagcgccatgtccactggcgctggaaggcgtgccaccgcggatgggagact 83
||||||| ||||||||| ||| ||||||||| | | |||||||||| |||||| || ||
Sbjct: 1 tagacacctcagcgccacgtcacctggcgctgaatgccgtgccaccgtggatggaaggct 60
Query: 84 aagtcaccttgccaatgcatatttagcgtccccctatttgggcgctgaggtgtct 138
||||| | |||||| | | ||| |||| | |||||||| |||||||||||||
Sbjct: 61 gagtcagcgtgccaacgtacattcagcgccatgctatttgg-cgctgaggtgtct 114
>49933_osa-miRf10718-akr:pmrd
Length = 135
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 14 gcgctgaacttagacacttcagcgcca 40
||||||||||||||||| |||||||||
Sbjct: 135 gcgctgaacttagacacctcagcgcca 109
Score = 44.1 bits (22), Expect = 3e-05
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 16 gctgaacttagacacttcagcgccatgtccactggcgctggaaggcgtgccacc 69
||||||||||||||| | ||||||| ||| ||||||| || | | |||||||||
Sbjct: 3 gctgaacttagacaccttagcgccacgtcaactggcgttgaatgccgtgccacc 56
>50928_osa-miRf11713-akr:pmrd
Length = 127
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 16 gctgaacttagacacttcagcgcca 40
||||||||||||||| |||||||||
Sbjct: 127 gctgaacttagacacctcagcgcca 103
