miRNEST 2.0, an integrative microRNA resource :: BLAST
>50576_osa-miRf11361-akr:pmrd
Length = 179
Score = 129 bits (65), Expect = 1e-30
Identities = 91/102 (89%)
Strand = Plus / Plus
Query: 41 gccaacgtttgactatccgtcttatatgaaannnnnnnataattagtattttcattgctg 100
|||||||||||||| |||||||||||||||| ||||||||||||||||||| ||
Sbjct: 13 gccaacgtttgactgtccgtcttatatgaaaattttttataattagtattttcattgttg 72
Query: 101 ttagatgataaaacataattaatactttatgcgtgacttatc 142
||||||||||||| || |||||||||||||||||||||||||
Sbjct: 73 ttagatgataaaatatgattaatactttatgcgtgacttatc 114
>49729_osa-miRf10514-akr:pmrd
Length = 173
Score = 129 bits (65), Expect = 1e-30
Identities = 91/102 (89%)
Strand = Plus / Plus
Query: 41 gccaacgtttgactatccgtcttatatgaaannnnnnnataattagtattttcattgctg 100
|||||||||||||| |||||||||||||||| ||||||||||||||||||| ||
Sbjct: 10 gccaacgtttgactgtccgtcttatatgaaatttttttataattagtattttcattgttg 69
Query: 101 ttagatgataaaacataattaatactttatgcgtgacttatc 142
|||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 70 ttagatgataaaacatgattaacactttatgcgtgacttatc 111
>50503_osa-miRf11288-akr:pmrd
Length = 176
Score = 121 bits (61), Expect = 2e-28
Identities = 87/98 (88%)
Strand = Plus / Plus
Query: 42 ccaacgtttgactatccgtcttatatgaaannnnnnnataattagtattttcattgctgt 101
||||||||||||| ||||| |||||||||| ||||||||||||||||||| |||
Sbjct: 13 ccaacgtttgactgtccgttttatatgaaatttttttataattagtattttcattgttgt 72
Query: 102 tagatgataaaacataattaatactttatgcgtgactt 139
||||||||||||||| ||||||||||||||||||||||
Sbjct: 73 tagatgataaaacatgattaatactttatgcgtgactt 110
Score = 44.1 bits (22), Expect = 5e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 42 ccaacgtttgactatccgtcttatatgaaa 71
||||||||||||| |||||||||| |||||
Sbjct: 164 ccaacgtttgactgtccgtcttatttgaaa 135
>50479_osa-miRf11264-akr:pmrd
Length = 175
Score = 121 bits (61), Expect = 2e-28
Identities = 90/102 (88%)
Strand = Plus / Plus
Query: 41 gccaacgtttgactatccgtcttatatgaaannnnnnnataattagtattttcattgctg 100
|||||||||||||| |||||||||||||||| ||||||||||||||| ||| ||
Sbjct: 10 gccaacgtttgactgtccgtcttatatgaaatttttttataattagtattttcgttgttg 69
Query: 101 ttagatgataaaacataattaatactttatgcgtgacttatc 142
||||||||||||| || |||||||||||||||||||||||||
Sbjct: 70 ttagatgataaaaaatgattaatactttatgcgtgacttatc 111
Score = 44.1 bits (22), Expect = 5e-05
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 168 caaataagacaggacggttaaacgatggacacggaaac 205
|||||||||| ||||||| ||||| |||||||||||||
Sbjct: 138 caaataagac-ggacggtcaaacgttggacacggaaac 174
>50423_osa-miRf11208-akr:pmrd
Length = 175
Score = 113 bits (57), Expect = 6e-26
Identities = 86/98 (87%)
Strand = Plus / Plus
Query: 42 ccaacgtttgactatccgtcttatatgaaannnnnnnataattagtattttcattgctgt 101
||||||||||||| ||||||||||||||| ||||||||||||||||||| |||
Sbjct: 12 ccaacgtttgactgtccgtcttatatgaattttttttataattagtattttcattgttgt 71
Query: 102 tagatgataaaacataattaatactttatgcgtgactt 139
|||||||||||| || ||||||||||||||||||||||
Sbjct: 72 tagatgataaaatatgattaatactttatgcgtgactt 109
Score = 42.1 bits (21), Expect = 2e-04
Identities = 34/37 (91%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 168 caaataagacaggacggttaaacgatggacacggaaa 204
|||||||||| ||||||| ||||| ||||||||||||
Sbjct: 138 caaataagac-ggacggtcaaacgttggacacggaaa 173
>49549_osa-miRf10334-akr:pmrd
Length = 162
Score = 111 bits (56), Expect = 2e-25
Identities = 88/101 (87%)
Strand = Plus / Plus
Query: 41 gccaacgtttgactatccgtcttatatgaaannnnnnnataattagtattttcattgctg 100
|||||||||||||| |||||||||||||||| ||||||||| ||||||||| ||
Sbjct: 10 gccaacgtttgactgtccgtcttatatgaaatatttttataattagtgttttcattgttg 69
Query: 101 ttagatgataaaacataattaatactttatgcgtgacttat 141
|||||||||||||||| |||||||||||||||| ||||||
Sbjct: 70 ttagatgataaaacatgtttaatactttatgcgtcacttat 110
>51125_osa-miRf11910-akr:pmrd
Length = 174
Score = 107 bits (54), Expect = 4e-24
Identities = 90/103 (87%), Gaps = 1/103 (0%)
Strand = Plus / Plus
Query: 41 gccaacgtttgactatccgtcttatatgaaannnnnnnataattagtattttcattgctg 100
|||||||||||||| |||||||||||||||| |||||||||||||| |||| ||
Sbjct: 10 gccaacgtttgactgtccgtcttatatgaaatttttttataattagtatttttattgttg 69
Query: 101 ttagatgataaaaca-taattaatactttatgcgtgacttatc 142
||||||||||||||| | ||||||||||||||||||| |||||
Sbjct: 70 ttagatgataaaacattgattaatactttatgcgtgatttatc 112
>50253_osa-miRf11038-akr:pmrd
Length = 172
Score = 105 bits (53), Expect = 1e-23
Identities = 89/102 (87%), Gaps = 1/102 (0%)
Strand = Plus / Plus
Query: 41 gccaacgtttgactatccgtcttatatgaaannnnnnnataattagtattttcattgctg 100
|||||||||||||| ||||||||||||||| ||||||||||||||||||| ||
Sbjct: 10 gccaacgtttgactgtccgtcttatatgaa-tttttttataattagtattttcattgttg 68
Query: 101 ttagatgataaaacataattaatactttatgcgtgacttatc 142
|||||||||||||||| |||||||||||||| |||||||||
Sbjct: 69 ttagatgataaaacatggttaatactttatgcatgacttatc 110
Score = 44.1 bits (22), Expect = 5e-05
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 168 caaataagacaggacggttaaacgatggacacggaaac 205
|||||||||| ||||||| ||||| |||||||||||||
Sbjct: 135 caaataagac-ggacggtcaaacgttggacacggaaac 171
>50252_osa-miRf11037-akr:pmrd
Length = 172
Score = 105 bits (53), Expect = 1e-23
Identities = 89/102 (87%), Gaps = 1/102 (0%)
Strand = Plus / Plus
Query: 41 gccaacgtttgactatccgtcttatatgaaannnnnnnataattagtattttcattgctg 100
|||||||||||||| ||||||||||||||| ||||||||||||||||||| ||
Sbjct: 10 gccaacgtttgactgtccgtcttatatgaa-tttttttataattagtattttcattgttg 68
Query: 101 ttagatgataaaacataattaatactttatgcgtgacttatc 142
|||||||||||||||| |||||||||||||| |||||||||
Sbjct: 69 ttagatgataaaacatggttaatactttatgcatgacttatc 110
Score = 44.1 bits (22), Expect = 5e-05
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 168 caaataagacaggacggttaaacgatggacacggaaac 205
|||||||||| ||||||| ||||| |||||||||||||
Sbjct: 135 caaataagac-ggacggtcaaacgttggacacggaaac 171
>50251_osa-miRf11036-akr:pmrd
Length = 179
Score = 105 bits (53), Expect = 1e-23
Identities = 89/102 (87%), Gaps = 1/102 (0%)
Strand = Plus / Plus
Query: 41 gccaacgtttgactatccgtcttatatgaaannnnnnnataattagtattttcattgctg 100
|||||||||||||| ||||||||||||||| ||||||||||||||||||| ||
Sbjct: 14 gccaacgtttgactgtccgtcttatatgaa-tttttttataattagtattttcattgttg 72
Query: 101 ttagatgataaaacataattaatactttatgcgtgacttatc 142
|||||||||||||||| |||||||||||||| |||||||||
Sbjct: 73 ttagatgataaaacatggttaatactttatgcatgacttatc 114
Score = 44.1 bits (22), Expect = 5e-05
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 168 caaataagacaggacggttaaacgatggacacggaaac 205
|||||||||| ||||||| ||||| |||||||||||||
Sbjct: 139 caaataagac-ggacggtcaaacgttggacacggaaac 175
>49875_osa-miRf10660-akr:pmrd
Length = 191
Score = 105 bits (53), Expect = 1e-23
Identities = 89/102 (87%), Gaps = 1/102 (0%)
Strand = Plus / Plus
Query: 42 ccaacgtttgactatccgtcttatatgaaannnnnnn-ataattagtattttcattgctg 100
||||||||||||| |||||||||||| ||| |||||||||||||| |||| ||
Sbjct: 24 ccaacgtttgactgtccgtcttatataaaattttttttataattagtatttttattgttg 83
Query: 101 ttagatgataaaacataattaatactttatgcgtgacttatc 142
|||||||||||||||| |||||||||||||||||||||||||
Sbjct: 84 ttagatgataaaacatgattaatactttatgcgtgacttatc 125
>50829_osa-miRf11614-akr:pmrd
Length = 179
Score = 95.6 bits (48), Expect = 1e-20
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 79 ataattagtattttcattgctgttagatgataaaacataattaatactttatgcgtgact 138
||||||| |||||| ||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 50 ataattaatatttttattgctgttagatgataaaacatgattaatactttatgcatgact 109
Query: 139 tatc 142
||||
Sbjct: 110 tatc 113
>50030_osa-miRf10815-akr:pmrd
Length = 175
Score = 93.7 bits (47), Expect = 6e-20
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 48 tttgactatccgtcttatatgaaannnnnnnataattagtattttcattgctgttagatg 107
||||||| |||||||||||||||| |||||| |||||||||||| |||||||||
Sbjct: 17 tttgactgtccgtcttatatgaaatttttttataatttgtattttcattgttgttagatg 76
Query: 108 ataaaacataattaatactttatgcgtgactt 139
||||||||| ||||||| ||||| ||||||||
Sbjct: 77 ataaaacatgattaatattttatacgtgactt 108
Score = 42.1 bits (21), Expect = 2e-04
Identities = 34/37 (91%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 169 aaataagacaggacggttaaacgatggacacggaaac 205
||||||||| ||||||| ||||| |||||||||||||
Sbjct: 139 aaataagac-ggacggtcaaacgttggacacggaaac 174
>49912_osa-miRf10697-akr:pmrd
Length = 183
Score = 93.7 bits (47), Expect = 6e-20
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 41 gccaacgtttgactatccgtcttatatgaaannnnnnnataattagtattttcattgctg 100
|||||||||||||| |||||||||||||||| ||||||||||||||||||| ||
Sbjct: 10 gccaacgtttgactgtccgtcttatatgaaaattttttataattagtattttcattgttg 69
Query: 101 ttagatgataaaacat 116
||||||||||||||||
Sbjct: 70 ttagatgataaaacat 85
>49911_osa-miRf10696-akr:pmrd
Length = 185
Score = 93.7 bits (47), Expect = 6e-20
Identities = 67/76 (88%)
Strand = Plus / Minus
Query: 41 gccaacgtttgactatccgtcttatatgaaannnnnnnataattagtattttcattgctg 100
|||||||||||||| |||||||||||||||| ||||||||||||||||||| ||
Sbjct: 175 gccaacgtttgactgtccgtcttatatgaaaattttttataattagtattttcattgttg 116
Query: 101 ttagatgataaaacat 116
||||||||||||||||
Sbjct: 115 ttagatgataaaacat 100
>51120_osa-miRf11905-akr:pmrd
Length = 174
Score = 89.7 bits (45), Expect = 9e-19
Identities = 86/102 (84%)
Strand = Plus / Plus
Query: 41 gccaacgtttgactatccgtcttatatgaaannnnnnnataattagtattttcattgctg 100
||||||||||||| |||||||||||||||| ||||||| |||| || || ||
Sbjct: 10 gccaacgtttgaccgtccgtcttatatgaaatttttttataattactattatcgttattg 69
Query: 101 ttagatgataaaacataattaatactttatgcgtgacttatc 142
|||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 70 ttagatgataaaacatgattaatactttatacgtgacttatc 111
Score = 40.1 bits (20), Expect = 7e-04
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 32 gtttttgtggccaacgtttgactatccgtcttatatgaaa 71
||||| ||| |||||||||||| |||||||||| |||||
Sbjct: 173 gttttcgtgtccaacgtttgaccgtccgtcttatttgaaa 134
>50950_osa-miRf11735-akr:pmrd
Length = 185
Score = 89.7 bits (45), Expect = 9e-19
Identities = 58/61 (95%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 79 ataattagtattttcattgctgttagatgataaaacataattaatactttatgcgtgact 138
||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||
Sbjct: 56 ataattagtattttcattgttgttagatgat-aaacatgattaatactttatgcgtgact 114
Query: 139 t 139
|
Sbjct: 115 t 115
Score = 42.1 bits (21), Expect = 2e-04
Identities = 34/37 (91%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 169 aaataagacaggacggttaaacgatggacacggaaac 205
||||||||| ||||||| ||||| |||||||||||||
Sbjct: 142 aaataagac-ggacggtcaaacgttggacacggaaac 177
>50624_osa-miRf11409-akr:pmrd
Length = 167
Score = 89.7 bits (45), Expect = 9e-19
Identities = 83/98 (84%)
Strand = Plus / Plus
Query: 42 ccaacgtttgactatccgtcttatatgaaannnnnnnataattagtattttcattgctgt 101
||||||||||||| ||| |||||||||||| |||||||||||||| ||| |||
Sbjct: 14 ccaacgtttgactgtccatcttatatgaaatttttttataattagtatttttattattgt 73
Query: 102 tagatgataaaacataattaatactttatgcgtgactt 139
||||| ||||||||| |||||||||| |||||||||||
Sbjct: 74 tagataataaaacatgattaatacttaatgcgtgactt 111
>50468_osa-miRf11253-akr:pmrd
Length = 177
Score = 89.7 bits (45), Expect = 9e-19
Identities = 79/91 (86%), Gaps = 1/91 (1%)
Strand = Plus / Plus
Query: 42 ccaacgtttgactatccgtcttatatgaaannnnnnnataattagtattttcattgctgt 101
||||||||||||| ||||| |||||||||| ||||||| ||||||||||| |||
Sbjct: 13 ccaacgtttgactgtccgttttatatgaaatttttt-ataattaatattttcattgttgt 71
Query: 102 tagatgataaaacataattaatactttatgc 132
||||||||||||||| |||||||||||||||
Sbjct: 72 tagatgataaaacatgattaatactttatgc 102
>50654_osa-miRf11439-akr:pmrd
Length = 173
Score = 81.8 bits (41), Expect = 2e-16
Identities = 85/102 (83%)
Strand = Plus / Plus
Query: 41 gccaacgtttgactatccgtcttatatgaaannnnnnnataattagtattttcattgctg 100
|||||||||||||| ||| ||||||||||| |||||||||| |||||||| ||
Sbjct: 10 gccaacgtttgactgtccatcttatatgaattttttttataattagtactttcattgttg 69
Query: 101 ttagatgataaaacataattaatactttatgcgtgacttatc 142
|||||||||||| ||| |||| ||||||| |||||||||||
Sbjct: 70 ttagatgataaatcatggttaacactttatacgtgacttatc 111
Score = 44.1 bits (22), Expect = 5e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 38 gtggccaacgtttgactatccgtcttatatgaaa 71
|||||||||||||||| |||||||||| |||||
Sbjct: 166 gtggccaacgtttgaccgtccgtcttatttgaaa 133
>50597_osa-miRf11382-akr:pmrd
Length = 178
Score = 77.8 bits (39), Expect = 3e-15
Identities = 77/92 (83%)
Strand = Plus / Minus
Query: 48 tttgactatccgtcttatatgaaannnnnnnataattagtattttcattgctgttagatg 107
||||||| ||||| |||||||||| |||||| ||||||| |||| ||||||||
Sbjct: 159 tttgactgtccgttttatatgaaatttttttataatttgtatttttattgttgttagatt 100
Query: 108 ataaaacataattaatactttatgcgtgactt 139
||||||||| ||||||| ||||||||||||||
Sbjct: 99 ataaaacatgattaatattttatgcgtgactt 68
>49051_osa-miR812d:pmrd
Length = 153
Score = 67.9 bits (34), Expect = 3e-12
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 82 attagtattttcattgctgttagatgataaaacataattaatactttatgcgtgactt 139
||||||||||| |||| | ||| |||||||||||| | ||||||||||||||||||||
Sbjct: 110 attagtatttttattgttcttatatgataaaacatgaataatactttatgcgtgactt 53
Score = 40.1 bits (20), Expect = 7e-04
Identities = 30/32 (93%), Gaps = 1/32 (3%)
Strand = Plus / Plus
Query: 169 aaataagacaggacggttaaacgatggacacg 200
||||||||| ||||||||||||| ||||||||
Sbjct: 123 aaataagac-ggacggttaaacgttggacacg 153
>49049_osa-miR812b:pmrd
Length = 170
Score = 65.9 bits (33), Expect = 1e-11
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 82 attagtattttcattgctgttagatgataaaacataattaatactttatgcgtgact 138
||||||||||| |||| | |||||||||||||||| | || ||||||||||||||||
Sbjct: 120 attagtatttttattgttattagatgataaaacatgaatattactttatgcgtgact 64
Score = 42.1 bits (21), Expect = 2e-04
Identities = 31/33 (93%), Gaps = 1/33 (3%)
Strand = Plus / Plus
Query: 168 caaataagacaggacggttaaacgatggacacg 200
|||||||||| ||||||||||||| ||||||||
Sbjct: 134 caaataagac-ggacggttaaacgttggacacg 165
>48800_oru-miR812:pmrd
Length = 174
Score = 65.9 bits (33), Expect = 1e-11
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 82 attagtattttcattgctgttagatgataaaacataattaatactttatgcgt 134
|||| |||||| |||||| |||||||||||||||||| || ||||||||||||
Sbjct: 124 attattatttttattgctattagatgataaaacataaatagtactttatgcgt 72
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 42 ccaacgtttgactatccgtcttat 65
||||||||||||| ||||||||||
Sbjct: 11 ccaacgtttgactgtccgtcttat 34
>49052_osa-miR812e:pmrd
Length = 170
Score = 54.0 bits (27), Expect = 5e-08
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 82 attagtattttcattgctgttagatgataaaacataattaatactttatgcgtgactta 140
|||| |||||| |||| | ||||||||||||| |||| || ||||| ||||||||||||
Sbjct: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgactta 106
Score = 50.1 bits (25), Expect = 7e-07
Identities = 35/37 (94%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 169 aaataagacaggacggttaaacgatggacacggaaac 205
||||||||| ||||||||||||| |||||||||||||
Sbjct: 135 aaataagac-ggacggttaaacgttggacacggaaac 170
>49057_osa-miR812j:pmrd
Length = 297
Score = 52.0 bits (26), Expect = 2e-07
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 82 attagtattttcattgctgttagatgataaaacataattaatactttatgcgtgactt 139
||||||||||| |||| | |||||| ||||||||| | || || ||||||||||||||
Sbjct: 181 attagtatttttattgttattagattataaaacatgaatagtagtttatgcgtgactt 124
>48793_obt-miR812:pmrd
Length = 175
Score = 48.1 bits (24), Expect = 3e-06
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 87 tattttcattgctgttagatgataaaacataattaatactttatgcgtgact 138
|||||| |||| | |||||||||||||||| | || ||||||||| ||||||
Sbjct: 120 tatttttattgttattagatgataaaacatgaatagtactttatgtgtgact 69
>48792_obr-miR812:pmrd
Length = 174
Score = 48.1 bits (24), Expect = 3e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 32 gtttttgtggccaacgtttgactatccgtcttatatgaaa 71
||||||||| ||||||||||| ||||||||||| |||||
Sbjct: 1 gtttttgtgtccaacgtttgatcatccgtcttatttgaaa 40
>51166_osa-miRf11951-akr:pmrd
Length = 174
Score = 46.1 bits (23), Expect = 1e-05
Identities = 53/63 (84%)
Strand = Plus / Minus
Query: 80 taattagtattttcattgctgttagatgataaaacataattaatactttatgcgtgactt 139
||||||||||||||||| | ||||||||||||| || | ||||| || |||| ||| ||
Sbjct: 125 taattagtattttcattatttttagatgataaaatatgaataatatttcatgcatgattt 66
Query: 140 atc 142
|||
Sbjct: 65 atc 63
>49050_osa-miR812c:pmrd
Length = 164
Score = 46.1 bits (23), Expect = 1e-05
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 99 tgttagatgataaaacataattaatactttatgcgtgacttat 141
||||| |||||||||||| | ||||| ||||||| ||||||||
Sbjct: 96 tgttaaatgataaaacatgaataatattttatgcatgacttat 54
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 179 ggacggttaaacgatggacacggaaac 205
||||||||||||| |||||||||||||
Sbjct: 137 ggacggttaaacgttggacacggaaac 163
>49048_osa-miR812a:pmrd
Length = 234
Score = 46.1 bits (23), Expect = 1e-05
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 168 caaataagacaggacggttaaacgatggacacgga 202
|||||||||| ||||||||||||| ||||||||||
Sbjct: 168 caaataagac-ggacggttaaacgttggacacgga 201
