miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>47678_ath-miRf10578-akr:pmrd
Length = 143
Score = 276 bits (139), Expect = 4e-75
Identities = 139/139 (100%)
Strand = Plus / Minus
Query: 1 cagtatacaagcagttgcagttgcaaagataaagaacttaaacagatctacgtgtacaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 cagtatacaagcagttgcagttgcaaagataaagaacttaaacagatctacgtgtacaac 82
Query: 61 tttctatggagaccaaacagctttatacatgtctaataaatgagaatatatctctgcaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 tttctatggagaccaaacagctttatacatgtctaataaatgagaatatatctctgcaac 22
Query: 121 tgcaactgcttgccgtttg 139
|||||||||||||||||||
Sbjct: 21 tgcaactgcttgccgtttg 3
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 8 caagcagttgcagttgcaaagata 31
|||||||||||||||||| |||||
Sbjct: 10 caagcagttgcagttgcagagata 33
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 109 tatctctgcaactgcaactgcttg 132
||||| ||||||||||||||||||
Sbjct: 111 tatctttgcaactgcaactgcttg 134
>47359_ath-miRf10259-akr:pmrd
Length = 125
Score = 248 bits (125), Expect = 9e-67
Identities = 125/125 (100%)
Strand = Plus / Plus
Query: 8 caagcagttgcagttgcaaagataaagaacttaaacagatctacgtgtacaactttctat 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caagcagttgcagttgcaaagataaagaacttaaacagatctacgtgtacaactttctat 60
Query: 68 ggagaccaaacagctttatacatgtctaataaatgagaatatatctctgcaactgcaact 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggagaccaaacagctttatacatgtctaataaatgagaatatatctctgcaactgcaact 120
Query: 128 gcttg 132
|||||
Sbjct: 121 gcttg 125
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 109 tatctctgcaactgcaactgcttg 132
||||| ||||||||||||||||||
Sbjct: 24 tatctttgcaactgcaactgcttg 1
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 8 caagcagttgcagttgcaaagata 31
|||||||||||||||||| |||||
Sbjct: 125 caagcagttgcagttgcagagata 102
