miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48252_ath-miRf11152-akr:pmrd
Length = 95
Score = 170 bits (86), Expect = 1e-43
Identities = 86/86 (100%)
Strand = Plus / Minus
Query: 1 caacgcctcgcaaatccctcgcagaagaagtcgcaaaatcctaattgagtaaccctactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 caacgcctcgcaaatccctcgcagaagaagtcgcaaaatcctaattgagtaaccctactt 30
Query: 61 ttgcgaggaatttgtgagggtcgttg 86
||||||||||||||||||||||||||
Sbjct: 29 ttgcgaggaatttgtgagggtcgttg 4
>47362_ath-miRf10262-akr:pmrd
Length = 103
Score = 170 bits (86), Expect = 1e-43
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 1 caacgcctcgcaaatccctcgcagaagaagtcgcaaaatcctaattgagtaaccctactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 caacgcctcgcaaatccctcgcagaagaagtcgcaaaatcctaattgagtaaccctactt 70
Query: 61 ttgcgaggaatttgtgagggtcgttg 86
||||||||||||||||||||||||||
Sbjct: 71 ttgcgaggaatttgtgagggtcgttg 96
>47965_ath-miRf10865-akr:pmrd
Length = 89
Score = 131 bits (66), Expect = 9e-32
Identities = 81/86 (94%)
Strand = Plus / Plus
Query: 1 caacgcctcgcaaatccctcgcagaagaagtcgcaaaatcctaattgagtaaccctactt 60
|||||||||||||||||||||||||||||| | ||| |||||||||||||||||||| ||
Sbjct: 4 caacgcctcgcaaatccctcgcagaagaagcctcaatatcctaattgagtaaccctaatt 63
Query: 61 ttgcgaggaatttgtgagggtcgttg 86
|||||||||||||| |||||||||||
Sbjct: 64 ttgcgaggaatttgcgagggtcgttg 89
