miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>47693_ath-miRf10593-akr:pmrd
Length = 221
Score = 97.6 bits (49), Expect = 2e-21
Identities = 55/57 (96%)
Strand = Plus / Plus
Query: 1 acaatacttaggcttttaagatctggttgcggttctagttgttatactcactcatac 57
||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 82 acaatacttaggcttttaagatctgtttgcagttctagttgttatactcactcatac 138
Score = 67.9 bits (34), Expect = 2e-12
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 66 tgtatgagtgagtataacaaatagaaccgcaaccgaattttaaaagcctaagtattgt 123
|||||||||||||||||||| |||||| |||| | || |||||||||||||||||||
Sbjct: 139 tgtatgagtgagtataacaactagaactgcaaacagatcttaaaagcctaagtattgt 82
>48274_ath-miRf11174-akr:pmrd
Length = 190
Score = 58.0 bits (29), Expect = 2e-09
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 5 tacttaggcttttaagatctggttgcggttctagttgttatactcactcatac 57
|||||||||||||||| || |||||||||| |||| ||||||||| ||||||
Sbjct: 70 tacttaggcttttaagctccggttgcggtttaagttcttatactcaatcatac 122
Score = 44.1 bits (22), Expect = 2e-05
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 66 tgtatgagtgagtataacaaatagaaccgcaaccgaattttaaaagcctaagta 119
||||||| ||||||||| || | ||||||||||| | |||||||||||||||
Sbjct: 123 tgtatgattgagtataagaacttaaaccgcaaccggagcttaaaagcctaagta 70
