miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48456_cre-miR1157:pmrd
Length = 137
Score = 272 bits (137), Expect = 6e-74
Identities = 137/137 (100%)
Strand = Plus / Plus
Query: 1 tcctgggcgcagtgttccagctgcagtacacctggtcccgctatttgaatctcgctgatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcctgggcgcagtgttccagctgcagtacacctggtcccgctatttgaatctcgctgatc 60
Query: 61 ggcaccatgggggtggtggtgatcagcgctattcaggtagcgggaccaggtgtactgcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggcaccatgggggtggtggtgatcagcgctattcaggtagcgggaccaggtgtactgcag 120
Query: 121 ccggaacactgccagga 137
|||||||||||||||||
Sbjct: 121 ccggaacactgccagga 137
Score = 87.7 bits (44), Expect = 2e-18
Identities = 104/124 (83%)
Strand = Plus / Minus
Query: 9 gcagtgttccagctgcagtacacctggtcccgctatttgaatctcgctgatcggcaccat 68
|||||||||| |||||||||||||||||||||||| ||||| |||||||| |||||
Sbjct: 132 gcagtgttccggctgcagtacacctggtcccgctacctgaatagcgctgatcaccaccac 73
Query: 69 gggggtggtggtgatcagcgctattcaggtagcgggaccaggtgtactgcagccggaaca 128
||||| |||||||| ||||| |||||||||||||||||||||||| ||||||
Sbjct: 72 ccccatggtgccgatcagcgagattcaaatagcgggaccaggtgtactgcagctggaaca 13
Query: 129 ctgc 132
||||
Sbjct: 12 ctgc 9
