miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>54765_vun-miR2118:pmrd
Length = 129
Score = 256 bits (129), Expect = 3e-69
Identities = 129/129 (100%)
Strand = Plus / Plus
Query: 1 gaggaagtgatgggagatgggagggtcggtaaagaatatatctgagactcgactcaatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaggaagtgatgggagatgggagggtcggtaaagaatatatctgagactcgactcaatct 60
Query: 61 cgatctctctcagtgttgtgttgttttgtttatccttttgccgattccacccattcctat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgatctctctcagtgttgtgttgttttgtttatccttttgccgattccacccattcctat 120
Query: 121 gatttcctt 129
|||||||||
Sbjct: 121 gatttcctt 129
>54385_pvu-miR2118:pmrd
Length = 95
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 96 ttttgccgattccacccattcctatgatttcctt 129
||||||||||||||||||||||||||||||||||
Sbjct: 62 ttttgccgattccacccattcctatgatttcctt 95
>48778_mtr-miR2118:pmrd
Length = 92
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 101 ccgattccacccattcctatgatttcctt 129
|||||||||||||||||||| ||||||||
Sbjct: 58 ccgattccacccattcctattatttcctt 86
