miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48643_han-miR157b:pmrd
Length = 364
Score = 718 bits (362), Expect = 0.0
Identities = 362/362 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacggtatgcttttgcgttggaacatgcatacgaaagtaacta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tgacagaagagagagagcacggtatgcttttgcgttggaacatgcatacgaaagtaacta 61
Query: 61 atcatacgataaattatcaaaactactgtcgatagagtaattaggaaaacaaaccttgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 atcatacgataaattatcaaaactactgtcgatagagtaattaggaaaacaaaccttgat 121
Query: 121 gaaaaacaccggctgtgtgctgggaattgcgtgtggtttcccaaatagagttcaaagcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gaaaaacaccggctgtgtgctgggaattgcgtgtggtttcccaaatagagttcaaagcag 181
Query: 181 gttcgggttgaaccagttcaggaacattgttagacacaaaacttatttgatgttgcccat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gttcgggttgaaccagttcaggaacattgttagacacaaaacttatttgatgttgcccat 241
Query: 241 cataaaatgatgaagactgacttcttgagttaaagtggacagtttctttttctttttgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 cataaaatgatgaagactgacttcttgagttaaagtggacagtttctttttctttttgtg 301
Query: 301 gctttcggcgacgggcattgtggtcagaaagcctctggcgacagctccgcttcttcccat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gctttcggcgacgggcattgtggtcagaaagcctctggcgacagctccgcttcttcccat 361
Query: 361 ca 362
||
Sbjct: 362 ca 363
>46923_ath-miR156s:pmrd
Length = 218
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacggt 23
|||||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacggt 23
>46922_ath-miR156r:pmrd
Length = 326
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacggt 23
|||||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacggt 23
>54909_zel-miR157:pmrd
Length = 69
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacg 21
|||||||||||||||||||||
Sbjct: 2 tgacagaagagagagagcacg 22
>54908_zel-miR156:pmrd
Length = 67
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacg 21
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacg 21
>54672_tae-miR156b:pmrd
Length = 416
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacg 21
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacg 21
>54671_tae-miR156a:pmrd
Length = 52
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacg 21
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacg 21
>54662_stu-miR157b:pmrd
Length = 617
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacg 21
|||||||||||||||||||||
Sbjct: 532 tgacagaagagagagagcacg 552
>54660_stu-miR156e:pmrd
Length = 72
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacg 21
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacg 21
>54659_stu-miR156d:pmrd
Length = 171
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacg 21
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacg 21
>54658_stu-miR156c:pmrd
Length = 85
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacg 21
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacg 21
>54623_sof-miR156e:pmrd
Length = 70
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacg 21
|||||||||||||||||||||
Sbjct: 50 tgacagaagagagagagcacg 70
>51321_par-miR157:pmrd
Length = 116
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacg 21
|||||||||||||||||||||
Sbjct: 2 tgacagaagagagagagcacg 22
>51320_par-miR156:pmrd
Length = 114
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacg 21
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacg 21
>51319_pam-miR157:pmrd
Length = 216
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacg 21
|||||||||||||||||||||
Sbjct: 2 tgacagaagagagagagcacg 22
>48818_osa-miR156r:pmrd
Length = 83
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacg 21
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacg 21
>48632_gra-miR157c:pmrd
Length = 183
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacg 21
|||||||||||||||||||||
Sbjct: 2 tgacagaagagagagagcacg 22
>48492_ghr-miR157:pmrd
Length = 152
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacg 21
|||||||||||||||||||||
Sbjct: 2 tgacagaagagagagagcacg 22
>48477_eca-miR156:pmrd
Length = 150
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacg 21
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacg 21
>48471_csi-miR156a:pmrd
Length = 56
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacg 21
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacg 21
>48426_cpt-miR156b:pmrd
Length = 185
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacg 21
|||||||||||||||||||||
Sbjct: 11 tgacagaagagagagagcacg 31
>48418_can-miR157:pmrd
Length = 155
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacg 21
|||||||||||||||||||||
Sbjct: 2 tgacagaagagagagagcacg 22
>48416_can-miR156a:pmrd
Length = 152
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagagagcacg 21
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacg 21
