miRNEST 2.0, an integrative microRNA resource :: BLAST
>54673_tae-miR159a:pmrd
Length = 177
Score = 289 bits (146), Expect = 3e-79
Identities = 168/174 (96%), Gaps = 1/174 (0%)
Strand = Plus / Plus
Query: 1 tggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgcttgttca 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 2 tggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgctcgttca 61
Query: 61 tggttcccactatcctatctccattagaacacgaggagataggcttgtggtttgcatgat 120
||||||||||||||||||||||| ||||| ||||||||| |||| ||||||||||||||
Sbjct: 62 tggttcccactatcctatctcca-tagaaaacgaggagagaggcctgtggtttgcatgac 120
Query: 121 cgaggagccgcttcgatccctcgctgaccgctgtttggattgaagggagctctg 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgaggagccgcttcgatccctcgctgaccgctgtttggattgaagggagctctg 174
>54392_sar-miR159:pmrd
Length = 175
Score = 149 bits (75), Expect = 8e-37
Identities = 151/175 (86%), Gaps = 1/175 (0%)
Strand = Plus / Plus
Query: 1 tggagctcctatcattccaatgaagggtctaccg-gaagggtttgtgcagctgcttgttc 59
|||||||||||||||||||||||| ||||| | |||||| | || |||||||| ||||
Sbjct: 1 tggagctcctatcattccaatgaaaggtcttgctagaaggggtggtacagctgctcgttc 60
Query: 60 atggttcccactatcctatctccattagaacacgaggagataggcttgtggtttgcatga 119
|||||||||||||||||| |||| || ||| | |||||||||| ||||| ||||||||
Sbjct: 61 atggttcccactatcctacctccgtttgaaaccagggagataggcctgtggcttgcatga 120
Query: 120 tcgaggagccgcttcgatccctcgctgaccgctgtttggattgaagggagctctg 174
||||||||||| ||| ||||||||| ||||| |||||||||||||||||||||
Sbjct: 121 ccgaggagccgcatcgtcccctcgctggccgctctttggattgaagggagctctg 175
>48820_osa-miR159b:pmrd
Length = 188
Score = 97.6 bits (49), Expect = 3e-21
Identities = 145/174 (83%), Gaps = 6/174 (3%)
Strand = Plus / Plus
Query: 1 tggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgcttgttca 60
|||||||||| || |||||||||| ||| || | ||||||| | ||||||||||||||
Sbjct: 11 tggagctcctttcgttccaatgaaaggtttatctgaagggtga-tacagctgcttgttca 69
Query: 61 tggttcccactatcctatctccattagaacacgaggagataggcttgtggtttgcatgat 120
||||||||||||| ||||||| || ||| | ||||||||||||||||||||||||
Sbjct: 70 tggttcccactattctatctc-ataggaaaa----gagataggcttgtggtttgcatgac 124
Query: 121 cgaggagccgcttcgatccctcgctgaccgctgtttggattgaagggagctctg 174
| |||||||| || | ||| ||||||| || |||||||||||||||||||||
Sbjct: 125 caaggagccgaatcaactccttgctgaccactctttggattgaagggagctctg 178
>54930_zma-miR159a:pmrd
Length = 246
Score = 87.7 bits (44), Expect = 3e-18
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 2 ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgcttgttcat 61
|||||||||||||||||||||||||||| | |||||| | || | |||||| ||||||
Sbjct: 22 ggagctcctatcattccaatgaagggtcgttccgaagggctggttccgctgctcgttcat 81
Query: 62 ggttcccactatcctatctc 81
||||||||||||||||||||
Sbjct: 82 ggttcccactatcctatctc 101
Score = 85.7 bits (43), Expect = 1e-17
Identities = 70/79 (88%)
Strand = Plus / Plus
Query: 96 gagataggcttgtggtttgcatgatcgaggagccgcttcgatccctcgctgaccgctgtt 155
|||||||||||||||||||||||| |||||||| || || |||| |||| ||||| ||
Sbjct: 149 gagataggcttgtggtttgcatgaccgaggagctgcaccgcccccttgctggccgctctt 208
Query: 156 tggattgaagggagctctg 174
|||||||||||||||||||
Sbjct: 209 tggattgaagggagctctg 227
>54629_sof-miR159b:pmrd
Length = 266
Score = 85.7 bits (43), Expect = 1e-17
Identities = 70/79 (88%)
Strand = Plus / Plus
Query: 96 gagataggcttgtggtttgcatgatcgaggagccgcttcgatccctcgctgaccgctgtt 155
|||||||||||||||||||||||| |||||||| || || |||| |||| ||||| ||
Sbjct: 169 gagataggcttgtggtttgcatgaccgaggagctgcaccgtccccttgctggccgctctt 228
Query: 156 tggattgaagggagctctg 174
|||||||||||||||||||
Sbjct: 229 tggattgaagggagctctg 247
Score = 71.9 bits (36), Expect = 2e-13
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 2 ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgcttgttcat 61
|||||||||||||||||||||||||| | | ||||||| || | |||||| ||||||
Sbjct: 22 ggagctcctatcattccaatgaagggccgttctgaagggtg-gttccgctgctcgttcat 80
Query: 62 ggttcccactatcctatctc 81
||||||||||||||||||||
Sbjct: 81 ggttcccactatcctatctc 100
>54628_sof-miR159a:pmrd
Length = 265
Score = 85.7 bits (43), Expect = 1e-17
Identities = 70/79 (88%)
Strand = Plus / Plus
Query: 96 gagataggcttgtggtttgcatgatcgaggagccgcttcgatccctcgctgaccgctgtt 155
|||||||||||||||||||||||| |||||||| || || |||| |||| ||||| ||
Sbjct: 168 gagataggcttgtggtttgcatgaccgaggagctgcaccgtccccttgctggccgctctt 227
Query: 156 tggattgaagggagctctg 174
|||||||||||||||||||
Sbjct: 228 tggattgaagggagctctg 246
Score = 79.8 bits (40), Expect = 6e-16
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 2 ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgcttgttcat 61
|||||||||||||||||||||||||| | | |||||||| || | |||||| ||||||
Sbjct: 22 ggagctcctatcattccaatgaagggccgttctgaagggtt-gttccgctgctcgttcat 80
Query: 62 ggttcccactatcctatctc 81
||||||||||||||||||||
Sbjct: 81 ggttcccactatcctatctc 100
>54934_zma-miR159e:pmrd
Length = 203
Score = 79.8 bits (40), Expect = 6e-16
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 96 gagataggcttgtggtttgcatgatcgaggagccgcttcgatccct-cgctgaccgctgt 154
||||| |||||||||||||||||| |||||||| || ||| |||| || ||||||||||
Sbjct: 123 gagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgctgt 182
Query: 155 ttggattgaagggagctctg 174
||||| ||||||||||||||
Sbjct: 183 ttggagtgaagggagctctg 202
Score = 46.1 bits (23), Expect = 9e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 47 cagctgcttgttcatggttcccactatcctatctc 81
|||||||| |||||||||||||||| ||| |||||
Sbjct: 48 cagctgctcgttcatggttcccactgtcccatctc 82
>54631_sof-miR159d:pmrd
Length = 265
Score = 79.8 bits (40), Expect = 6e-16
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 2 ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgcttgttcat 61
|||||||||||||||||||||||||| | | |||||||| || | |||||| ||||||
Sbjct: 22 ggagctcctatcattccaatgaagggccgttctgaagggtt-gttccgctgctcgttcat 80
Query: 62 ggttcccactatcctatctc 81
||||||||||||||||||||
Sbjct: 81 ggttcccactatcctatctc 100
Score = 69.9 bits (35), Expect = 6e-13
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 96 gagataggcttgtggtttgcatgatcgaggagccgcttcgatccctcgctgaccgctgtt 155
|||||| ||||||||||||||||| ||| |||| || || |||| |||| ||||| ||
Sbjct: 168 gagatacgcttgtggtttgcatgaccgatgagctgcaccgtccccttgctggccgctctt 227
Query: 156 tggattgaagggagctctg 174
|||||||||||||||||||
Sbjct: 228 tggattgaagggagctctg 246
>51338_pgl-miR159:pmrd
Length = 226
Score = 77.8 bits (39), Expect = 2e-15
Identities = 69/79 (87%)
Strand = Plus / Plus
Query: 96 gagataggcttgtggtttgcatgatcgaggagccgcttcgatccctcgctgaccgctgtt 155
||||||||||||||| |||||||| |||||||| || || |||| |||| ||||| ||
Sbjct: 148 gagataggcttgtggcttgcatgaccgaggagctgcaccgtccccttgctggccgctctt 207
Query: 156 tggattgaagggagctctg 174
|||||||||||||||||||
Sbjct: 208 tggattgaagggagctctg 226
Score = 63.9 bits (32), Expect = 4e-11
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 38 gggtttgtgcagctgcttgttcatggttcccactatcctatctc 81
||||| || |||||||| ||||||||||||||||||||||||||
Sbjct: 38 gggttggtacagctgctcgttcatggttcccactatcctatctc 81
>54931_zma-miR159b:pmrd
Length = 221
Score = 71.9 bits (36), Expect = 2e-13
Identities = 71/80 (88%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 96 gagataggcttgtggtttgcatgatcgaggagccgcttcgatccct-cgctgaccgctgt 154
||||| |||||||||||||||||| |||||||| || || |||| || ||||||||||
Sbjct: 124 gagatgggcttgtggtttgcatgaccgaggagctgca-cgtccccttcgttgaccgctgt 182
Query: 155 ttggattgaagggagctctg 174
||||||||||||||||||||
Sbjct: 183 ttggattgaagggagctctg 202
Score = 46.1 bits (23), Expect = 9e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 47 cagctgcttgttcatggttcccactatcctatctc 81
|||||||| |||||||||||||||| ||| |||||
Sbjct: 66 cagctgctcgttcatggttcccactgtcccatctc 100
>54632_sof-miR159e:pmrd
Length = 264
Score = 71.9 bits (36), Expect = 2e-13
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 2 ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgcttgttcat 61
|||||||||||||||||||||||||| | | ||||||| || | |||||| ||||||
Sbjct: 21 ggagctcctatcattccaatgaagggccgttctgaagggtg-gttccgctgctcgttcat 79
Query: 62 ggttcccactatcctatctc 81
||||||||||||||||||||
Sbjct: 80 ggttcccactatcctatctc 99
Score = 67.9 bits (34), Expect = 2e-12
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 96 gagataggcttgtggtttgcatgatcgaggagccgcttcgatccctcgctgaccgctgtt 155
|||||||||||||||||||||||| ||| |||| || || |||| |||| ||||| ||
Sbjct: 167 gagataggcttgtggtttgcatgaccgaagagctgcaccgtccccttgctggccgctctt 226
Query: 156 tggattgaagggagctct 173
||||||||| ||||||||
Sbjct: 227 tggattgaaaggagctct 244
>54777_vvi-miR159c:pmrd
Length = 190
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 152 tgtttggattgaagggagctct 173
||||||||||||||||||||||
Sbjct: 158 tgtttggattgaagggagctct 179
>54937_zma-miR159m:pmrd
Length = 457
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctctg 174
|||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctg 21
>54674_tae-miR159b:pmrd
Length = 255
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctctg 174
|||||||||||||||||||||
Sbjct: 230 tttggattgaagggagctctg 250
>54653_spr-miR159:pmrd
Length = 392
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctctg 174
|||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctg 21
>48825_osa-miR159m:pmrd
Length = 249
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctctg 174
|||||||||||||||||||||
Sbjct: 229 tttggattgaagggagctctg 249
>48819_osa-miR159a:pmrd
Length = 272
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctctg 174
|||||||||||||||||||||
Sbjct: 242 tttggattgaagggagctctg 262
>48796_oru-miR159:pmrd
Length = 274
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctctg 174
|||||||||||||||||||||
Sbjct: 242 tttggattgaagggagctctg 262
>48656_hvv-miR159a:pmrd
Length = 303
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctctg 174
|||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctg 21
>54540_sly-miR159:pmrd
Length = 177
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctct 173
||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctct 176
>54378_pvu-miR159:pmrd
Length = 174
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctct 173
||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctct 172
>54377_pvu-miR159:pmrd
Length = 174
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctct 173
||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctct 172
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctct 173
||||||||||||||||||||
Sbjct: 149 tttggattgaagggagctct 168
>51604_ptc-miR159c:pmrd
Length = 183
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctct 173
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>51603_ptc-miR159b:pmrd
Length = 187
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctct 173
||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctct 177
>51602_ptc-miR159a:pmrd
Length = 183
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctct 173
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>48701_mtr-miR159c:pmrd
Length = 44
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctct 173
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
>48699_mtr-miR159a:pmrd
Length = 168
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctct 173
||||||||||||||||||||
Sbjct: 148 tttggattgaagggagctct 167
>48686_ltu-miR159:pmrd
Length = 345
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctct 173
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
>48539_gma-miR159a:pmrd
Length = 214
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctct 173
||||||||||||||||||||
Sbjct: 175 tttggattgaagggagctct 194
>48395_bra-miR159a:pmrd
Length = 185
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctct 173
||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctct 182
>48339_bna-miR159:pmrd
Length = 183
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctct 173
||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctct 180
>46933_ath-miR159c:pmrd
Length = 225
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 153 gtttggattgaagggagctc 172
||||||||||||||||||||
Sbjct: 194 gtttggattgaagggagctc 213
>46932_ath-miR159b:pmrd
Length = 196
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctct 173
||||||||||||||||||||
Sbjct: 168 tttggattgaagggagctct 187
>46931_ath-miR159a:pmrd
Length = 184
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctct 173
||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctct 182
