miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48683_lsa-miR156:pmrd
Length = 355
Score = 704 bits (355), Expect = 0.0
Identities = 355/355 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagagagagagcacagttggagtcctcacggactccattaaaacaccctcctgg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacagttggagtcctcacggactccattaaaacaccctcctgg 60
Query: 62 tggaacataaggaggtggattatccaggttgctttgccatggaagcggtgggaacttttc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggaacataaggaggtggattatccaggttgctttgccatggaagcggtgggaacttttc 120
Query: 122 tccggcaattgggaggtcgatggcggctcgaggcggtggtgccgcccttgttcctggcca 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tccggcaattgggaggtcgatggcggctcgaggcggtggtgccgcccttgttcctggcca 180
Query: 182 ctgaatccttcctcttgagcatgacgaaaagtccattagaaagcctccagaattcccatt 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctgaatccttcctcttgagcatgacgaaaagtccattagaaagcctccagaattcccatt 240
Query: 242 gttttcaaagattgaggaggagacagttccatagcgagtggatagcagagatggctttct 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gttttcaaagattgaggaggagacagttccatagcgagtggatagcagagatggctttct 300
Query: 302 tctacgttcattgtgcccagccaatcgtctcctgcagcttctttttccctggtca 356
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tctacgttcattgtgcccagccaatcgtctcctgcagcttctttttccctggtca 355
>48305_bdi-miR156:pmrd
Length = 147
Score = 54.0 bits (27), Expect = 8e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcacagttggagtc 31
||||||||||||||||||||||| |||||||
Sbjct: 100 ttgacagaagagagagagcacagctggagtc 130
>48654_hvv-miR156c:pmrd
Length = 178
Score = 52.0 bits (26), Expect = 3e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 2 tgacagaagagagagagcacagttggagtc 31
||||||||||||||||||||||| ||||||
Sbjct: 1 tgacagaagagagagagcacagtcggagtc 30
>48650_hvs-miR156:pmrd
Length = 178
Score = 52.0 bits (26), Expect = 3e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 2 tgacagaagagagagagcacagttggagtc 31
||||||||||||||||||||||| ||||||
Sbjct: 1 tgacagaagagagagagcacagtcggagtc 30
>46921_ath-miR156q:pmrd
Length = 59
Score = 52.0 bits (26), Expect = 3e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 2 tgacagaagagagagagcacagttggagtc 31
|||||||||||||||||||||||| |||||
Sbjct: 1 tgacagaagagagagagcacagtttgagtc 30
>54621_sof-miR156c:pmrd
Length = 68
Score = 46.1 bits (23), Expect = 2e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 2 tgacagaagagagagagcacagttggagtcc 32
|||||||||||||||||||||| | ||||||
Sbjct: 1 tgacagaagagagagagcacagctagagtcc 31
>54531_sin-miR157:pmrd
Length = 83
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcacag 23
|||||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcacag 23
>48689_mdo-miR156b:pmrd
Length = 79
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagagagagagcacagt 24
|||||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacagt 23
>54624_sof-miR156f:pmrd
Length = 46
Score = 44.1 bits (22), Expect = 7e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 2 tgacagaagagagagagcacagttggagtc 31
||||||||||||||||||||| |||||||
Sbjct: 1 tgacagaagagagagagcacaactggagtc 30
>54530_sin-miR156:pmrd
Length = 81
Score = 44.1 bits (22), Expect = 7e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagagagagagcacag 23
||||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacag 22
>48676_lja-miR157b:pmrd
Length = 86
Score = 44.1 bits (22), Expect = 7e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcaca 22
||||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcaca 22
>48655_hvv-miR156d:pmrd
Length = 203
Score = 44.1 bits (22), Expect = 7e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagagagagagcacag 23
||||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacag 22
>48533_gma-miR156f:pmrd
Length = 267
Score = 44.1 bits (22), Expect = 7e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagagagagagcacag 23
||||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcacag 22
>48529_gma-miR156b:pmrd
Length = 120
Score = 44.1 bits (22), Expect = 7e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcaca 22
||||||||||||||||||||||
Sbjct: 20 ttgacagaagagagagagcaca 41
>46903_aqc-miR529:pmrd
Length = 125
Score = 44.1 bits (22), Expect = 7e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcaca 22
||||||||||||||||||||||
Sbjct: 17 ttgacagaagagagagagcaca 38
>46857_ahy-miR157k:pmrd
Length = 139
Score = 44.1 bits (22), Expect = 7e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcaca 22
||||||||||||||||||||||
Sbjct: 21 ttgacagaagagagagagcaca 42
>54928_zma-miR157m:pmrd
Length = 189
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 169 ttgacagaagagagagagcac 189
>54926_zma-miR156q:pmrd
Length = 189
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 169 ttgacagaagagagagagcac 189
>54925_zma-miR156p:pmrd
Length = 189
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 169 ttgacagaagagagagagcac 189
>54920_zma-miR156j:pmrd
Length = 125
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagagagagagcaca 22
|||||||||||||||||||||
Sbjct: 21 tgacagaagagagagagcaca 41
>54909_zel-miR157:pmrd
Length = 69
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcac 21
>54663_stu-miR157c:pmrd
Length = 189
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcac 21
>54662_stu-miR157b:pmrd
Length = 617
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 531 ttgacagaagagagagagcac 551
>54652_spr-miR156:pmrd
Length = 125
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagagagagagcaca 22
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcaca 21
>54627_sof-miR156u:pmrd
Length = 82
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 62 ttgacagaagagagagagcac 82
>54625_sof-miR156g:pmrd
Length = 403
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagagagagagcaca 22
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcaca 21
>54396_sbi-miR156d:pmrd
Length = 125
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagagagagagcaca 22
|||||||||||||||||||||
Sbjct: 21 tgacagaagagagagagcaca 41
>54372_pts-miR157:pmrd
Length = 356
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 336 ttgacagaagagagagagcac 356
>54371_pts-miR156c:pmrd
Length = 85
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagagagagagcaca 22
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcaca 21
>54370_pts-miR156b:pmrd
Length = 356
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 336 ttgacagaagagagagagcac 356
>54365_ptr-miR156:pmrd
Length = 373
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 353 ttgacagaagagagagagcac 373
>51357_ppt-miR156c:pmrd
Length = 95
Score = 42.1 bits (21), Expect = 3e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2 tgacagaagagagagagcacagttg 26
||||||||||||| |||||||||||
Sbjct: 10 tgacagaagagagtgagcacagttg 34
>51321_par-miR157:pmrd
Length = 116
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcac 21
>51319_pam-miR157:pmrd
Length = 216
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcac 21
>48811_osa-miR156k:pmrd
Length = 106
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagagagagagcaca 22
|||||||||||||||||||||
Sbjct: 11 tgacagaagagagagagcaca 31
>48787_nbe-miR157b:pmrd
Length = 207
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcac 21
>48786_nbe-miR157a:pmrd
Length = 169
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 149 ttgacagaagagagagagcac 169
>48785_nbe-miR156b:pmrd
Length = 169
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 149 ttgacagaagagagagagcac 169
>48688_mdo-miR156a:pmrd
Length = 109
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 89 ttgacagaagagagagagcac 109
>48674_lja-miR156:pmrd
Length = 47
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagagagagagcaca 22
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcaca 21
>48653_hvv-miR156b:pmrd
Length = 86
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 66 ttgacagaagagagagagcac 86
>48643_han-miR157b:pmrd
Length = 364
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcac 21
>48633_gra-miR157d:pmrd
Length = 89
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 69 ttgacagaagagagagagcac 89
>48632_gra-miR157c:pmrd
Length = 183
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcac 21
>48538_gma-miR157r:pmrd
Length = 147
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 127 ttgacagaagagagagagcac 147
>48536_gma-miR156i:pmrd
Length = 117
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagagagagagcaca 22
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcaca 21
>48418_can-miR157:pmrd
Length = 155
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcac 21
>46928_ath-miR157m:pmrd
Length = 50
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttgacagaagagagagagcac 21
|||||||||||||||||||||
Sbjct: 30 ttgacagaagagagagagcac 50
>46920_ath-miR156p:pmrd
Length = 47
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 tgacagaagagagagagcaca 22
|||||||||||||||||||||
Sbjct: 1 tgacagaagagagagagcaca 21
