miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>48546_gma-miR162m:pmrd
          Length = 367

 Score = 56.0 bits (28), Expect = 4e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                      
Query: 1  tcgataaacctctgcatccagcgctcac 28
          ||||||||||||||||||||||||||||
Sbjct: 1  tcgataaacctctgcatccagcgctcac 28




>48545_gma-miR162a:pmrd
          Length = 102

 Score = 56.0 bits (28), Expect = 4e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 1   tcgataaacctctgcatccagcgctcac 28
           ||||||||||||||||||||||||||||
Sbjct: 73  tcgataaacctctgcatccagcgctcac 100




>52400_ptc-miRf10578-akr:pmrd
          Length = 103

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                   
Query: 1  tcgataaacctctgcatccagcgct 25
          |||||||||||||||||||||||||
Sbjct: 28 tcgataaacctctgcatccagcgct 4




>52399_ptc-miRf10577-akr:pmrd
          Length = 103

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                   
Query: 1  tcgataaacctctgcatccagcgct 25
          |||||||||||||||||||||||||
Sbjct: 28 tcgataaacctctgcatccagcgct 4




>51616_ptc-miR162a:pmrd
          Length = 107

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 1   tcgataaacctctgcatccagcgct 25
           |||||||||||||||||||||||||
Sbjct: 78  tcgataaacctctgcatccagcgct 102




>47354_ath-miRf10254-akr:pmrd
          Length = 115

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                   
Query: 1  tcgataaacctctgcatccagcgct 25
          |||||||||||||||||||||||||
Sbjct: 35 tcgataaacctctgcatccagcgct 11




>46938_ath-miR162b:pmrd
          Length = 111

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 1   tcgataaacctctgcatccagcgct 25
           |||||||||||||||||||||||||
Sbjct: 79  tcgataaacctctgcatccagcgct 103




>54784_vvi-miR162:pmrd
          Length = 103

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 1   tcgataaacctctgcatccagcgctcac 28
           ||||||||||||||||||||||| ||||
Sbjct: 73  tcgataaacctctgcatccagcgttcac 100




>48493_ghr-miR162a:pmrd
          Length = 148

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 1   tcgataaacctctgcatccagcgc 24
           ||||||||||||||||||||||||
Sbjct: 94  tcgataaacctctgcatccagcgc 117




>48423_cpa-miR162a:pmrd
          Length = 109

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 1   tcgataaacctctgcatccagcg 23
           |||||||||||||||||||||||
Sbjct: 80  tcgataaacctctgcatccagcg 102




>46937_ath-miR162a:pmrd
          Length = 140

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 1   tcgataaacctctgcatccagcg 23
           |||||||||||||||||||||||
Sbjct: 89  tcgataaacctctgcatccagcg 111




>54387_rco-miR162:pmrd
          Length = 96

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  tcgataaacctctgcatccagc 22
          ||||||||||||||||||||||
Sbjct: 75 tcgataaacctctgcatccagc 96




>54948_zma-miR162b:pmrd
          Length = 130

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 1   tcgataaacctctgcatccag 21
           |||||||||||||||||||||
Sbjct: 110 tcgataaacctctgcatccag 130




>54542_sly-miR162:pmrd
          Length = 99

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  tcgataaacctctgcatccag 21
          |||||||||||||||||||||
Sbjct: 79 tcgataaacctctgcatccag 99




>52498_ptc-miRf10676-akr:pmrd
          Length = 101

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 1  tcgataaacctctgcatccag 21
          |||||||||||||||||||||
Sbjct: 27 tcgataaacctctgcatccag 7




>52497_ptc-miRf10675-akr:pmrd
          Length = 105

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 1  tcgataaacctctgcatccag 21
          |||||||||||||||||||||
Sbjct: 29 tcgataaacctctgcatccag 9




>52244_ptc-miRf10422-akr:pmrd
          Length = 105

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 1  tcgataaacctctgcatccag 21
          |||||||||||||||||||||
Sbjct: 29 tcgataaacctctgcatccag 9




>52243_ptc-miRf10421-akr:pmrd
          Length = 101

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 1  tcgataaacctctgcatccag 21
          |||||||||||||||||||||
Sbjct: 27 tcgataaacctctgcatccag 7




>51618_ptc-miR162c:pmrd
          Length = 107

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  tcgataaacctctgcatccag 21
          |||||||||||||||||||||
Sbjct: 78 tcgataaacctctgcatccag 98




>51617_ptc-miR162b:pmrd
          Length = 107

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  tcgataaacctctgcatccag 21
          |||||||||||||||||||||
Sbjct: 78 tcgataaacctctgcatccag 98




>48834_osa-miR162a:pmrd
          Length = 171

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 1   tcgataaacctctgcatccag 21
           |||||||||||||||||||||
Sbjct: 143 tcgataaacctctgcatccag 163




>48707_mtr-miR162d:pmrd
          Length = 87

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  tcgataaacctctgcatccag 21
          |||||||||||||||||||||
Sbjct: 67 tcgataaacctctgcatccag 87




>48682_llu-miR162:pmrd
          Length = 80

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  tcgataaacctctgcatccag 21
          |||||||||||||||||||||
Sbjct: 60 tcgataaacctctgcatccag 80




>48706_mtr-miR162c:pmrd
          Length = 86

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 1  tcgataaacctctgcatcca 20
          ||||||||||||||||||||
Sbjct: 20 tcgataaacctctgcatcca 1




>48705_mtr-miR162b:pmrd
          Length = 85

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  tcgataaacctctgcatcca 20
          ||||||||||||||||||||
Sbjct: 66 tcgataaacctctgcatcca 85