miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48772_mtr-miR2087:pmrd
Length = 265
Score = 400 bits (202), Expect = e-112
Identities = 244/265 (92%)
Strand = Plus / Plus
Query: 1 gcttgatgaaaactgctcttgacacatatgatagagctaaaaaacatatgtaaaagacga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcttgatgaaaactgctcttgacacatatgatagagctaaaaaacatatgtaaaagacga 60
Query: 61 aaatgcccatgtagcagtttactaccgaagtaaagaaccggctgcagttaactgctgaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaatgcccatgtagcagtttactaccgaagtaaagaaccggctgcagttaactgctgaag 120
Query: 121 tgtgaagnnnnnnnnnnnnnnnnnnnnncgtcggcagttaactgcagtcggtttcttact 180
||||||| ||||||||||||||||||||||||||||||||
Sbjct: 121 tgtgaagtttttttttttttttctttttcgtcggcagttaactgcagtcggtttcttact 180
Query: 181 tcggtagttaaccgttgcaggggcattttcgtcatttacatgtgtttttcagccctatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcggtagttaaccgttgcaggggcattttcgtcatttacatgtgtttttcagccctatca 240
Query: 241 tatgtgtcaacagcaattttctagc 265
|||||||||||||||||||||||||
Sbjct: 241 tatgtgtcaacagcaattttctagc 265
Score = 103 bits (52), Expect = 7e-23
Identities = 94/108 (87%)
Strand = Plus / Minus
Query: 154 gcagttaactgcagtcggtttcttacttcggtagttaaccgttgcaggggcattttcgtc 213
|||||||||||||| ||||| ||||||||||||| ||| | | || |||||||||||||
Sbjct: 115 gcagttaactgcagccggttctttacttcggtagtaaactgctacatgggcattttcgtc 56
Query: 214 atttacatgtgtttttcagccctatcatatgtgtcaacagcaattttc 261
||||||| ||||||| ||| |||||||||||||||| |||| |||||
Sbjct: 55 ttttacatatgttttttagctctatcatatgtgtcaagagcagttttc 8
Score = 103 bits (52), Expect = 7e-23
Identities = 94/108 (87%)
Strand = Plus / Minus
Query: 8 gaaaactgctcttgacacatatgatagagctaaaaaacatatgtaaaagacgaaaatgcc 67
||||| |||| |||||||||||||||| ||| ||||||| ||||||| ||||||||||||
Sbjct: 261 gaaaattgctgttgacacatatgatagggctgaaaaacacatgtaaatgacgaaaatgcc 202
Query: 68 catgtagcagtttactaccgaagtaaagaaccggctgcagttaactgc 115
| || | | ||| ||||||||||||| ||||| ||||||||||||||
Sbjct: 201 cctgcaacggttaactaccgaagtaagaaaccgactgcagttaactgc 154
