miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48810_osa-miR156j:pmrd
Length = 165
Score = 170 bits (86), Expect = 1e-43
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacacggcgcggcggctagccatcggcgggatgcctgcccccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42 tgacagaagagagtgagcacacggcgcggcggctagccatcggcgggatgcctgcccccg 101
Query: 61 ccgcgtgctcgctcctctttctgtca 86
||||||||||||||||||||||||||
Sbjct: 102 ccgcgtgctcgctcctctttctgtca 127
>48808_osa-miR156h:pmrd
Length = 101
Score = 170 bits (86), Expect = 1e-43
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacacggcgcggcggctagccatcggcgggatgcctgcccccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 tgacagaagagagtgagcacacggcgcggcggctagccatcggcgggatgcctgcccccg 68
Query: 61 ccgcgtgctcgctcctctttctgtca 86
||||||||||||||||||||||||||
Sbjct: 69 ccgcgtgctcgctcctctttctgtca 94
>54923_zma-miR156n:pmrd
Length = 84
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacacggcgcg 28
||||||||||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcacacggcgcg 28
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 59 cgccgcgtgctcgctcctctttctgtca 86
|||||||||||| || ||||||||||||
Sbjct: 57 cgccgcgtgctcacttctctttctgtca 84
>54914_zma-miR156d:pmrd
Length = 119
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacacggcgcg 28
||||||||||||||||||||||||||||
Sbjct: 16 tgacagaagagagtgagcacacggcgcg 43
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 59 cgccgcgtgctcgctcctctttctgtca 86
|||||||||||| || ||||||||||||
Sbjct: 72 cgccgcgtgctcacttctctttctgtca 99
>54402_sbi-miR157:pmrd
Length = 86
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacacggcgcg 28
||||||||||||||||||||||||||||
Sbjct: 2 tgacagaagagagtgagcacacggcgcg 29
>54393_sbi-miR156a:pmrd
Length = 84
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacacggcgcg 28
||||||||||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcacacggcgcg 28
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 59 cgccgcgtgctcgctcctctttctgtca 86
|||||||||||| || ||||||||||||
Sbjct: 57 cgccgcgtgctcacttctctttctgtca 84
>54921_zma-miR156k:pmrd
Length = 123
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 56 ccccgccgcgtgctcgctcctctttctgtca 86
|||||||||||||||||| ||||||||||||
Sbjct: 74 ccccgccgcgtgctcgcttctctttctgtca 104
Score = 38.2 bits (19), Expect = 0.001
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacacggcgcggcg 31
||||||||||||| |||||| |||||||||
Sbjct: 21 tgacagaagagagcgagcacctggcgcggcg 51
>54397_sbi-miR156e:pmrd
Length = 123
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 56 ccccgccgcgtgctcgctcctctttctgtca 86
|||||||||||||||||| ||||||||||||
Sbjct: 74 ccccgccgcgtgctcgcttctctttctgtca 104
>48804_osa-miR156d:pmrd
Length = 129
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacacggcg 26
||||||||||||||||||||||||||
Sbjct: 20 tgacagaagagagtgagcacacggcg 45
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 59 cgccgcgtgctcgctcctctttctgtca 86
|||||||||||| |||||||||||||||
Sbjct: 76 cgccgcgtgctcactcctctttctgtca 103
>54919_zma-miR156i:pmrd
Length = 117
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacacggc 25
|||||||||||||||||||||||||
Sbjct: 13 tgacagaagagagtgagcacacggc 37
>54918_zma-miR156h:pmrd
Length = 115
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacacggc 25
|||||||||||||||||||||||||
Sbjct: 20 tgacagaagagagtgagcacacggc 44
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 60 gccgcgtgctcgctcctctttctgtca 86
||||||||||| || ||||||||||||
Sbjct: 71 gccgcgtgctcactgctctttctgtca 97
>54915_zma-miR156e:pmrd
Length = 126
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacacggc 25
|||||||||||||||||||||||||
Sbjct: 20 tgacagaagagagtgagcacacggc 44
>54400_sbi-miR156h:pmrd
Length = 94
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacacggc 25
|||||||||||||||||||||||||
Sbjct: 2 tgacagaagagagtgagcacacggc 26
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 60 gccgcgtgctcgctcctctttctgtca 86
||||||||||| || ||||||||||||
Sbjct: 64 gccgcgtgctcactgctctttctgtca 90
>54399_sbi-miR156g:pmrd
Length = 89
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacacggc 25
|||||||||||||||||||||||||
Sbjct: 2 tgacagaagagagtgagcacacggc 26
>48809_osa-miR156i:pmrd
Length = 90
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacacggc 25
|||||||||||||||||||||||||
Sbjct: 3 tgacagaagagagtgagcacacggc 27
>48805_osa-miR156e:pmrd
Length = 104
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacacggc 25
|||||||||||||||||||||||||
Sbjct: 10 tgacagaagagagtgagcacacggc 34
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 60 gccgcgtgctcgctcctctttctgtca 86
||||||||||| || ||||||||||||
Sbjct: 69 gccgcgtgctcactgctctttctgtca 95
>54656_stu-miR156a:pmrd
Length = 86
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacacg 23
|||||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcacacg 23
>54569_smo-miR156a:pmrd
Length = 102
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 2 gacagaagagagtgagcacacgg 24
|||||||||||||||||||||||
Sbjct: 12 gacagaagagagtgagcacacgg 34
>49326_osa-miRf10111-akr:pmrd
Length = 100
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacacg 23
|||||||||||||||||||||||
Sbjct: 7 tgacagaagagagtgagcacacg 29
>48801_osa-miR156a:pmrd
Length = 100
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacacg 23
|||||||||||||||||||||||
Sbjct: 7 tgacagaagagagtgagcacacg 29
>48491_ghr-miR156d:pmrd
Length = 96
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacacg 23
|||||||||||||||||||||||
Sbjct: 9 tgacagaagagagtgagcacacg 31
Score = 38.2 bits (19), Expect = 0.001
Identities = 26/27 (96%), Gaps = 1/27 (3%)
Strand = Plus / Minus
Query: 1 tgacagaagaga-gtgagcacacggcg 26
|||||||||||| ||||||||||||||
Sbjct: 91 tgacagaagagaagtgagcacacggcg 65
>48425_cpt-miR156a:pmrd
Length = 101
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacacg 23
|||||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacacg 33
>54924_zma-miR156o:pmrd
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacac 22
||||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcacac 22
>54922_zma-miR156m:pmrd
Length = 83
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacac 22
||||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcacac 22
>54913_zma-miR156c:pmrd
Length = 139
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacac 22
||||||||||||||||||||||
Sbjct: 21 tgacagaagagagtgagcacac 42
>54912_zma-miR156b:pmrd
Length = 124
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacac 22
||||||||||||||||||||||
Sbjct: 21 tgacagaagagagtgagcacac 42
>54911_zma-miR156a:pmrd
Length = 152
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacac 22
||||||||||||||||||||||
Sbjct: 18 tgacagaagagagtgagcacac 39
>54768_vvi-miR156c:pmrd
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacac 22
||||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacac 32
>54767_vvi-miR156b:pmrd
Length = 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacac 22
||||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacac 32
>54401_sbi-miR156i:pmrd
Length = 121
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacac 22
||||||||||||||||||||||
Sbjct: 3 tgacagaagagagtgagcacac 24
>54395_sbi-miR156c:pmrd
Length = 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacac 22
||||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcacac 22
>54394_sbi-miR156b:pmrd
Length = 84
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacac 22
||||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcacac 22
>53789_ptc-miRf11967-akr:pmrd
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacac 22
||||||||||||||||||||||
Sbjct: 3 tgacagaagagagtgagcacac 24
>52469_ptc-miRf10647-akr:pmrd
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1 tgacagaagagagtgagcacac 22
||||||||||||||||||||||
Sbjct: 93 tgacagaagagagtgagcacac 72
>51926_ptc-miRf10104-akr:pmrd
Length = 96
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacac 22
||||||||||||||||||||||
Sbjct: 8 tgacagaagagagtgagcacac 29
>51596_ptc-miR156f:pmrd
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacac 22
||||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacac 32
>51595_ptc-miR156e:pmrd
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacac 22
||||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacac 32
>51594_ptc-miR156d:pmrd
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacac 22
||||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacac 32
>51593_ptc-miR156c:pmrd
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacac 22
||||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacac 32
>51592_ptc-miR156b:pmrd
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacac 22
||||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacac 32
>51591_ptc-miR156a:pmrd
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacac 22
||||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacac 32
>51354_ppr-miR156:pmrd
Length = 103
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacac 22
||||||||||||||||||||||
Sbjct: 2 tgacagaagagagtgagcacac 23
>49442_osa-miRf10227-akr:pmrd
Length = 93
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1 tgacagaagagagtgagcacac 22
||||||||||||||||||||||
Sbjct: 89 tgacagaagagagtgagcacac 68
>48807_osa-miR156g:pmrd
Length = 116
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacac 22
||||||||||||||||||||||
Sbjct: 4 tgacagaagagagtgagcacac 25
>48806_osa-miR156f:pmrd
Length = 186
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacac 22
||||||||||||||||||||||
Sbjct: 4 tgacagaagagagtgagcacac 25
>48803_osa-miR156c:pmrd
Length = 149
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacac 22
||||||||||||||||||||||
Sbjct: 29 tgacagaagagagtgagcacac 50
>48802_osa-miR156b:pmrd
Length = 176
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacac 22
||||||||||||||||||||||
Sbjct: 43 tgacagaagagagtgagcacac 64
>48795_oru-miR156:pmrd
Length = 93
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacac 22
||||||||||||||||||||||
Sbjct: 2 tgacagaagagagtgagcacac 23
>48652_hvv-miR156a:pmrd
Length = 394
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacac 22
||||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcacac 22
>48489_ghr-miR156b:pmrd
Length = 113
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacac 22
||||||||||||||||||||||
Sbjct: 3 tgacagaagagagtgagcacac 24
>48488_ghr-miR156a:pmrd
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacac 22
||||||||||||||||||||||
Sbjct: 9 tgacagaagagagtgagcacac 30
>48336_bna-miR156a:pmrd
Length = 82
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacac 22
||||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcacac 22
>48248_ath-miRf11148-akr:pmrd
Length = 96
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1 tgacagaagagagtgagcacac 22
||||||||||||||||||||||
Sbjct: 96 tgacagaagagagtgagcacac 75
>47667_ath-miRf10567-akr:pmrd
Length = 98
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacac 22
||||||||||||||||||||||
Sbjct: 6 tgacagaagagagtgagcacac 27
>47357_ath-miRf10257-akr:pmrd
Length = 94
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacac 22
||||||||||||||||||||||
Sbjct: 3 tgacagaagagagtgagcacac 24
>47356_ath-miRf10256-akr:pmrd
Length = 94
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacac 22
||||||||||||||||||||||
Sbjct: 3 tgacagaagagagtgagcacac 24
>46915_ath-miR156f:pmrd
Length = 132
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacac 22
||||||||||||||||||||||
Sbjct: 21 tgacagaagagagtgagcacac 42
>46914_ath-miR156e:pmrd
Length = 107
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacac 22
||||||||||||||||||||||
Sbjct: 7 tgacagaagagagtgagcacac 28
>46913_ath-miR156d:pmrd
Length = 118
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacac 22
||||||||||||||||||||||
Sbjct: 18 tgacagaagagagtgagcacac 39
>46912_ath-miR156c:pmrd
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacac 22
||||||||||||||||||||||
Sbjct: 12 tgacagaagagagtgagcacac 33
>46910_ath-miR156a:pmrd
Length = 123
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcacac 22
||||||||||||||||||||||
Sbjct: 21 tgacagaagagagtgagcacac 42
