miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>50802_osa-miRf11587-akr:pmrd
Length = 119
Score = 83.8 bits (42), Expect = 1e-17
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 20 aagatggctcagccggccacgtggctgagccatcttgagtcccggttggt 69
|||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 86 aagatggctcagccggccacgtggctgagccatctttactcccggttggt 37
>49919_osa-miRf10704-akr:pmrd
Length = 115
Score = 83.8 bits (42), Expect = 1e-17
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 20 aagatggctcagccggccacgtggctgagccatcttgagtcccggttggt 69
||||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 84 aagattgctcagccggccacgtggctgagccatctttagtcccggttggt 35
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 13 gggactaaagatggctcagcc 33
|||||||||||||||||||||
Sbjct: 42 gggactaaagatggctcagcc 62
>50647_osa-miRf11432-akr:pmrd
Length = 100
Score = 81.8 bits (41), Expect = 6e-17
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 25 ggctcagccggccacgtggctgagccatcttgagtcccggttggt 69
||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 73 ggctcagccggccacgtggctgagccatctttagtcccggttggt 29
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 13 gggactaaagatggctcagcc 33
|||||||||||||||||||||
Sbjct: 36 gggactaaagatggctcagcc 56
>50646_osa-miRf11431-akr:pmrd
Length = 100
Score = 81.8 bits (41), Expect = 6e-17
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 25 ggctcagccggccacgtggctgagccatcttgagtcccggttggt 69
||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 28 ggctcagccggccacgtggctgagccatctttagtcccggttggt 72
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 13 gggactaaagatggctcagcc 33
|||||||||||||||||||||
Sbjct: 65 gggactaaagatggctcagcc 45
>50513_osa-miRf11298-akr:pmrd
Length = 98
Score = 69.9 bits (35), Expect = 2e-13
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 15 gactaaagatggctcagccggccacgtggctgagc 49
|||||||||||||||||||||||||||||||||||
Sbjct: 61 gactaaagatggctcagccggccacgtggctgagc 27
>50512_osa-miRf11297-akr:pmrd
Length = 112
Score = 65.9 bits (33), Expect = 3e-12
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 13 gggactaaagatggctcagccggccacgtggctgagccatcttgagtcccggttggt 69
|||||||||||||| | ||||||||||||||||| | ||||| |||||||||||||
Sbjct: 32 gggactaaagatggtttggccggccacgtggctgatcaatctttagtcccggttggt 88
>50445_osa-miRf11230-akr:pmrd
Length = 102
Score = 65.9 bits (33), Expect = 3e-12
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 13 gggactaaagatggctcagccggccacgtggctgagccatcttgagtcccggttggt 69
|||||||||||||| | ||||||||||||||||| | ||||| |||||||||||||
Sbjct: 27 gggactaaagatggtttggccggccacgtggctgaccgatctttagtcccggttggt 83
>50444_osa-miRf11229-akr:pmrd
Length = 102
Score = 65.9 bits (33), Expect = 3e-12
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 13 gggactaaagatggctcagccggccacgtggctgagccatcttgagtcccggttggt 69
|||||||||||||| | ||||||||||||||||| | ||||| |||||||||||||
Sbjct: 27 gggactaaagatggtttggccggccacgtggctgaccgatctttagtcccggttggt 83
>51280_osa-miRf12065-akr:pmrd
Length = 97
Score = 56.0 bits (28), Expect = 3e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 16 actaaagatggctcagccggccacgtggctga 47
||||||||||| ||||||||||||||||||||
Sbjct: 71 actaaagatggatcagccggccacgtggctga 40
>51279_osa-miRf12064-akr:pmrd
Length = 97
Score = 56.0 bits (28), Expect = 3e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 16 actaaagatggctcagccggccacgtggctga 47
||||||||||| ||||||||||||||||||||
Sbjct: 71 actaaagatggatcagccggccacgtggctga 40
>50175_osa-miRf10960-akr:pmrd
Length = 86
Score = 52.0 bits (26), Expect = 5e-08
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 13 gggactaaagatggctcagccggccacgtg 42
||||||||||||||||||||| ||||||||
Sbjct: 54 gggactaaagatggctcagccagccacgtg 25
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 41 tggctgagccatcttgagtcccggttggt 69
||||||||||||||| |||||||||||||
Sbjct: 33 tggctgagccatctttagtcccggttggt 61
>50174_osa-miRf10959-akr:pmrd
Length = 104
Score = 52.0 bits (26), Expect = 5e-08
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 13 gggactaaagatggctcagccggccacgtg 42
||||||||||||||||||||| ||||||||
Sbjct: 63 gggactaaagatggctcagccagccacgtg 34
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 41 tggctgagccatcttgagtcccggttggt 69
||||||||||||||| |||||||||||||
Sbjct: 42 tggctgagccatctttagtcccggttggt 70
>50709_osa-miRf11494-akr:pmrd
Length = 96
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 42 ggctgagccatcttgagtcccggttgg 68
|||||||||||||| ||||||||||||
Sbjct: 56 ggctgagccatctttagtcccggttgg 30
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 gggactaaagatggctcagccg 34
||||||||||||||||||||||
Sbjct: 36 gggactaaagatggctcagccg 57
>50708_osa-miRf11493-akr:pmrd
Length = 96
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 42 ggctgagccatcttgagtcccggttgg 68
|||||||||||||| ||||||||||||
Sbjct: 56 ggctgagccatctttagtcccggttgg 30
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 gggactaaagatggctcagccg 34
||||||||||||||||||||||
Sbjct: 36 gggactaaagatggctcagccg 57
>50152_osa-miRf10937-akr:pmrd
Length = 96
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 13 gggactaaagatggctcagccg 34
||||||||||||||||||||||
Sbjct: 61 gggactaaagatggctcagccg 40
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 42 ggctgagccatcttgagtcccggttggt 69
|||||||||||||| ||||||| |||||
Sbjct: 41 ggctgagccatctttagtcccgattggt 68
>50092_osa-miRf10877-akr:pmrd
Length = 107
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 13 gggactaaagatggctcagccg 34
||||||||||||||||||||||
Sbjct: 65 gggactaaagatggctcagccg 44
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 42 ggctgagccatcttgagtcccggtt 66
|||||||||||||| ||||||||||
Sbjct: 45 ggctgagccatctttagtcccggtt 69
>50925_osa-miRf11710-akr:pmrd
Length = 107
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 15 gactaaagatggctcagccg 34
||||||||||||||||||||
Sbjct: 49 gactaaagatggctcagccg 68
>50924_osa-miRf11709-akr:pmrd
Length = 107
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 15 gactaaagatggctcagccg 34
||||||||||||||||||||
Sbjct: 49 gactaaagatggctcagccg 68
>50923_osa-miRf11708-akr:pmrd
Length = 107
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 15 gactaaagatggctcagccg 34
||||||||||||||||||||
Sbjct: 59 gactaaagatggctcagccg 40
>50472_osa-miRf11257-akr:pmrd
Length = 96
Score = 38.2 bits (19), Expect = 8e-04
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 42 ggctgagccatcttgagtcccggttgg 68
|||| ||||||||| ||||||||||||
Sbjct: 56 ggctaagccatctttagtcccggttgg 30
>50471_osa-miRf11256-akr:pmrd
Length = 96
Score = 38.2 bits (19), Expect = 8e-04
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 42 ggctgagccatcttgagtcccggttgg 68
|||| ||||||||| ||||||||||||
Sbjct: 56 ggctaagccatctttagtcccggttgg 30
