miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>50922_osa-miRf11707-akr:pmrd
Length = 108
Score = 206 bits (104), Expect = 2e-54
Identities = 107/108 (99%)
Strand = Plus / Plus
Query: 1 acgggctcaccattgcaggaggaatggtcggctggggatcattggaccaatgtgcggcca 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1 acgggctcaccattgcaggaggaatggtcggctggggatcattggaccgatgtgcggcca 60
Query: 61 tgcgttcatcaaccttccttgccacctcctcttgcatgctgagctcgt 108
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcgttcatcaaccttccttgccacctcctcttgcatgctgagctcgt 108
>50470_osa-miRf11255-akr:pmrd
Length = 108
Score = 206 bits (104), Expect = 2e-54
Identities = 107/108 (99%)
Strand = Plus / Plus
Query: 1 acgggctcaccattgcaggaggaatggtcggctggggatcattggaccaatgtgcggcca 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1 acgggctcaccattgcaggaggaatggtcggctggggatcattggaccgatgtgcggcca 60
Query: 61 tgcgttcatcaaccttccttgccacctcctcttgcatgctgagctcgt 108
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcgttcatcaaccttccttgccacctcctcttgcatgctgagctcgt 108
>50137_osa-miRf10922-akr:pmrd
Length = 108
Score = 206 bits (104), Expect = 2e-54
Identities = 107/108 (99%)
Strand = Plus / Plus
Query: 1 acgggctcaccattgcaggaggaatggtcggctggggatcattggaccaatgtgcggcca 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1 acgggctcaccattgcaggaggaatggtcggctggggatcattggaccgatgtgcggcca 60
Query: 61 tgcgttcatcaaccttccttgccacctcctcttgcatgctgagctcgt 108
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcgttcatcaaccttccttgccacctcctcttgcatgctgagctcgt 108
>49231_osa-miRf10016-akr:pmrd
Length = 108
Score = 206 bits (104), Expect = 2e-54
Identities = 107/108 (99%)
Strand = Plus / Plus
Query: 1 acgggctcaccattgcaggaggaatggtcggctggggatcattggaccaatgtgcggcca 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1 acgggctcaccattgcaggaggaatggtcggctggggatcattggaccgatgtgcggcca 60
Query: 61 tgcgttcatcaaccttccttgccacctcctcttgcatgctgagctcgt 108
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcgttcatcaaccttccttgccacctcctcttgcatgctgagctcgt 108
>49227_osa-miRf10012-akr:pmrd
Length = 131
Score = 206 bits (104), Expect = 2e-54
Identities = 107/108 (99%)
Strand = Plus / Plus
Query: 1 acgggctcaccattgcaggaggaatggtcggctggggatcattggaccaatgtgcggcca 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 11 acgggctcaccattgcaggaggaatggtcggctggggatcattggaccgatgtgcggcca 70
Query: 61 tgcgttcatcaaccttccttgccacctcctcttgcatgctgagctcgt 108
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 tgcgttcatcaaccttccttgccacctcctcttgcatgctgagctcgt 118
>50940_osa-miRf11725-akr:pmrd
Length = 108
Score = 198 bits (100), Expect = 6e-52
Identities = 106/108 (98%)
Strand = Plus / Plus
Query: 1 acgggctcaccattgcaggaggaatggtcggctggggatcattggaccaatgtgcggcca 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1 acgggctcaccattgcaggaggaatggtcggctggggatcattggaccgatgtgcggcca 60
Query: 61 tgcgttcatcaaccttccttgccacctcctcttgcatgctgagctcgt 108
||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 61 tgcgttcatcaaccttctttgccacctcctcttgcatgctgagctcgt 108
>50881_osa-miRf11666-akr:pmrd
Length = 108
Score = 198 bits (100), Expect = 6e-52
Identities = 106/108 (98%)
Strand = Plus / Plus
Query: 1 acgggctcaccattgcaggaggaatggtcggctggggatcattggaccaatgtgcggcca 60
|||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 1 acgggctcaccattgcaggaggaatggtcggctggggatcatgggaccgatgtgcggcca 60
Query: 61 tgcgttcatcaaccttccttgccacctcctcttgcatgctgagctcgt 108
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcgttcatcaaccttccttgccacctcctcttgcatgctgagctcgt 108
>50767_osa-miRf11552-akr:pmrd
Length = 108
Score = 198 bits (100), Expect = 6e-52
Identities = 106/108 (98%)
Strand = Plus / Plus
Query: 1 acgggctcaccattgcaggaggaatggtcggctggggatcattggaccaatgtgcggcca 60
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1 acgggctcaccattgcaggaggaatggtcggctggggatcattggactgatgtgcggcca 60
Query: 61 tgcgttcatcaaccttccttgccacctcctcttgcatgctgagctcgt 108
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcgttcatcaaccttccttgccacctcctcttgcatgctgagctcgt 108
>50742_osa-miRf11527-akr:pmrd
Length = 108
Score = 198 bits (100), Expect = 6e-52
Identities = 106/108 (98%)
Strand = Plus / Plus
Query: 1 acgggctcaccattgcaggaggaatggtcggctggggatcattggaccaatgtgcggcca 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1 acgggctcaccattgcaggaggaatggtcggctggggatcattggaccgatgtgcggcca 60
Query: 61 tgcgttcatcaaccttccttgccacctcctcttgcatgctgagctcgt 108
|||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 61 tgcgttcatcaaccttccttgctacctcctcttgcatgctgagctcgt 108
>49947_osa-miRf10732-akr:pmrd
Length = 108
Score = 198 bits (100), Expect = 6e-52
Identities = 106/108 (98%)
Strand = Plus / Plus
Query: 1 acgggctcaccattgcaggaggaatggtcggctggggatcattggaccaatgtgcggcca 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1 acgggctcaccattgcaggaggaatggtcggctggggatcattggaccgatgtgcggcca 60
Query: 61 tgcgttcatcaaccttccttgccacctcctcttgcatgctgagctcgt 108
||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgctttcatcaaccttccttgccacctcctcttgcatgctgagctcgt 108
>49846_osa-miRf10631-akr:pmrd
Length = 108
Score = 198 bits (100), Expect = 6e-52
Identities = 106/108 (98%)
Strand = Plus / Plus
Query: 1 acgggctcaccattgcaggaggaatggtcggctggggatcattggaccaatgtgcggcca 60
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 1 acgggctcaccattgcaggaggaatggtcggctagggatcattggaccgatgtgcggcca 60
Query: 61 tgcgttcatcaaccttccttgccacctcctcttgcatgctgagctcgt 108
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcgttcatcaaccttccttgccacctcctcttgcatgctgagctcgt 108
>49797_osa-miRf10582-akr:pmrd
Length = 108
Score = 198 bits (100), Expect = 6e-52
Identities = 106/108 (98%)
Strand = Plus / Plus
Query: 1 acgggctcaccattgcaggaggaatggtcggctggggatcattggaccaatgtgcggcca 60
||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 1 acgggctcaccattgcaggaggaatggtcggctggggatcagtggaccgatgtgcggcca 60
Query: 61 tgcgttcatcaaccttccttgccacctcctcttgcatgctgagctcgt 108
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcgttcatcaaccttccttgccacctcctcttgcatgctgagctcgt 108
>49570_osa-miRf10355-akr:pmrd
Length = 108
Score = 198 bits (100), Expect = 6e-52
Identities = 106/108 (98%)
Strand = Plus / Plus
Query: 1 acgggctcaccattgcaggaggaatggtcggctggggatcattggaccaatgtgcggcca 60
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 1 acgggctcaccattgcaggaggaatggtcggctagggatcattggaccgatgtgcggcca 60
Query: 61 tgcgttcatcaaccttccttgccacctcctcttgcatgctgagctcgt 108
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcgttcatcaaccttccttgccacctcctcttgcatgctgagctcgt 108
>49448_osa-miRf10233-akr:pmrd
Length = 108
Score = 198 bits (100), Expect = 6e-52
Identities = 106/108 (98%)
Strand = Plus / Plus
Query: 1 acgggctcaccattgcaggaggaatggtcggctggggatcattggaccaatgtgcggcca 60
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 1 acgggctcaccattgcaggaggaatggtcggctggggatcattggaccgatgtgcggcta 60
Query: 61 tgcgttcatcaaccttccttgccacctcctcttgcatgctgagctcgt 108
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcgttcatcaaccttccttgccacctcctcttgcatgctgagctcgt 108
>49407_osa-miRf10192-akr:pmrd
Length = 108
Score = 198 bits (100), Expect = 6e-52
Identities = 106/108 (98%)
Strand = Plus / Plus
Query: 1 acgggctcaccattgcaggaggaatggtcggctggggatcattggaccaatgtgcggcca 60
||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 1 acgggctcaccattgcaggaggaatggtcggctggggattattggaccgatgtgcggcca 60
Query: 61 tgcgttcatcaaccttccttgccacctcctcttgcatgctgagctcgt 108
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcgttcatcaaccttccttgccacctcctcttgcatgctgagctcgt 108
>51111_osa-miRf11896-akr:pmrd
Length = 108
Score = 190 bits (96), Expect = 1e-49
Identities = 105/108 (97%)
Strand = Plus / Plus
Query: 1 acgggctcaccattgcaggaggaatggtcggctggggatcattggaccaatgtgcggcca 60
||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||
Sbjct: 1 acgggctcaccattgcaggaggaatggtcggctggagatcatgggaccgatgtgcggcca 60
Query: 61 tgcgttcatcaaccttccttgccacctcctcttgcatgctgagctcgt 108
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcgttcatcaaccttccttgccacctcctcttgcatgctgagctcgt 108
>50526_osa-miRf11311-akr:pmrd
Length = 108
Score = 190 bits (96), Expect = 1e-49
Identities = 105/108 (97%)
Strand = Plus / Plus
Query: 1 acgggctcaccattgcaggaggaatggtcggctggggatcattggaccaatgtgcggcca 60
|||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 1 acgggctcaccattgcaggaggaatggtcggctggggatcatgggaccgatgtgcggcca 60
Query: 61 tgcgttcatcaaccttccttgccacctcctcttgcatgctgagctcgt 108
||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcattcatcaaccttccttgccacctcctcttgcatgctgagctcgt 108
>50340_osa-miRf11125-akr:pmrd
Length = 108
Score = 190 bits (96), Expect = 1e-49
Identities = 105/108 (97%)
Strand = Plus / Plus
Query: 1 acgggctcaccattgcaggaggaatggtcggctggggatcattggaccaatgtgcggcca 60
|||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 1 acgggctcaccattgcaggaggaatggtcggctggggatcatgggaccgatgtgcggcca 60
Query: 61 tgcgttcatcaaccttccttgccacctcctcttgcatgctgagctcgt 108
||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcgttcatcagccttccttgccacctcctcttgcatgctgagctcgt 108
>49296_osa-miRf10081-akr:pmrd
Length = 108
Score = 184 bits (93), Expect = 9e-48
Identities = 102/105 (97%)
Strand = Plus / Plus
Query: 1 acgggctcaccattgcaggaggaatggtcggctggggatcattggaccaatgtgcggcca 60
||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 1 acgggctcaccattgcaggaggaatggtcggttggggatcattggactgatgtgcggcca 60
Query: 61 tgcgttcatcaaccttccttgccacctcctcttgcatgctgagct 105
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcgttcatcaaccttccttgccacctcctcttgcatgctgagct 105
>51091_osa-miRf11876-akr:pmrd
Length = 108
Score = 174 bits (88), Expect = 8e-45
Identities = 103/108 (95%)
Strand = Plus / Plus
Query: 1 acgggctcaccattgcaggaggaatggtcggctggggatcattggaccaatgtgcggcca 60
||||||||||||||||||||||||||||||||| |||||||||||||| ||||| || ||
Sbjct: 1 acgggctcaccattgcaggaggaatggtcggctagggatcattggaccgatgtgtggtca 60
Query: 61 tgcgttcatcaaccttccttgccacctcctcttgcatgctgagctcgt 108
||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcgttcatcacccttccttgccacctcctcttgcatgctgagctcgt 108
>50645_osa-miRf11430-akr:pmrd
Length = 108
Score = 174 bits (88), Expect = 8e-45
Identities = 103/108 (95%)
Strand = Plus / Plus
Query: 1 acgggctcaccattgcaggaggaatggtcggctggggatcattggaccaatgtgcggcca 60
|||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 1 acgggctcaccattgcaggaggaatggtcggctggggatcatgggactgatgtgcggcca 60
Query: 61 tgcgttcatcaaccttccttgccacctcctcttgcatgctgagctcgt 108
||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 61 tgcattcatcaaccttccctgccacctcctcttgcatgctgagctcgt 108
