miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>49200_osa-miR2865:pmrd
Length = 101
Score = 168 bits (85), Expect = 4e-43
Identities = 85/85 (100%)
Strand = Plus / Minus
Query: 1 gatcctctgcagtcactgcaccgtgcctttttcactaacatgtggatcaatgacaaaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 gatcctctgcagtcactgcaccgtgcctttttcactaacatgtggatcaatgacaaaggc 32
Query: 61 acggtacagtcgactgctgaggatt 85
|||||||||||||||||||||||||
Sbjct: 31 acggtacagtcgactgctgaggatt 7
>50685_osa-miRf11470-akr:pmrd
Length = 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 8 tgcagtcactgcaccgtgcctttttcactaacat 41
|||||| |||| ||||||||||| ||||||||||
Sbjct: 1 tgcagttactgtaccgtgcctttgtcactaacat 34
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 51 tgacaaaggcacggtacagt 70
||||||||||||||||||||
Sbjct: 27 tgacaaaggcacggtacagt 8
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 46 atcaatgacaaaggcacggtacagtcgactgc 77
|||| ||| ||||||||||| |||||||||||
Sbjct: 63 atcagtgataaaggcacggtgcagtcgactgc 94
Score = 38.2 bits (19), Expect = 0.001
Identities = 28/31 (90%)
Strand = Plus / Minus
Query: 15 actgcaccgtgcctttttcactaacatgtgg 45
|||||||||||||||| ||||| | ||||||
Sbjct: 87 actgcaccgtgcctttatcactgatatgtgg 57
>50686_osa-miRf11471-akr:pmrd
Length = 105
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 46 atcaatgacaaaggcacggtacagtcgactgc 77
|||| ||| ||||||||||| |||||||||||
Sbjct: 4 atcagtgataaaggcacggtgcagtcgactgc 35
