miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>50848_osa-miRf11633-akr:pmrd
          Length = 79

 Score = 85.7 bits (43), Expect = 4e-18
 Identities = 70/79 (88%)
 Strand = Plus / Plus

                                                                      
Query: 1  cggtcggaccggccatgcagagccggtcagaccgccggtcatcaccggtcagaccggctg 60
          ||||| ||||||||||||||||||||||||||||| ||  | |||| ||||||||||| |
Sbjct: 1  cggtcagaccggccatgcagagccggtcagaccgctggctaccaccagtcagaccggccg 60

                             
Query: 61 tgcaatgccagtcagaccg 79
          ||||||||| || ||||||
Sbjct: 61 tgcaatgccggttagaccg 79




>49748_osa-miRf10533-akr:pmrd
          Length = 121

 Score = 83.8 bits (42), Expect = 2e-17
 Identities = 70/78 (89%), Gaps = 1/78 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   cggtcggaccggccatgcagagccggtcagaccgccggtcatcaccggtcagaccggctg 60
           ||||| ||||||||||||||||||||| ||||||| ||| | |||| ||||||||||| |
Sbjct: 45  cggtcagaccggccatgcagagccggttagaccgcgggt-accaccagtcagaccggccg 103

                             
Query: 61  tgcaatgccagtcagacc 78
           ||||||||| ||||||||
Sbjct: 104 tgcaatgccggtcagacc 121




>50306_osa-miRf11091-akr:pmrd
          Length = 111

 Score = 69.9 bits (35), Expect = 2e-13
 Identities = 48/51 (94%), Gaps = 1/51 (1%)
 Strand = Plus / Plus

                                                             
Query: 7  gaccggccatgcagagccggtcagaccgccggtcatcaccggtcagaccgg 57
          ||||||||||||||||||||||||||||| ||| | |||||||||||||||
Sbjct: 46 gaccggccatgcagagccggtcagaccgcgggt-accaccggtcagaccgg 95



 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                        
Query: 7  gaccggccatgcagagccggtcagaccgcc 36
          |||||||||||||  |||||||||||||||
Sbjct: 1  gaccggccatgcaatgccggtcagaccgcc 30




>50857_osa-miRf11642-akr:pmrd
          Length = 76

 Score = 65.9 bits (33), Expect = 4e-12
 Identities = 67/77 (87%), Gaps = 1/77 (1%)
 Strand = Plus / Plus

                                                                      
Query: 2  ggtcggaccggccatgcagagccggtcagaccgccggtcatcaccggtcagaccggctgt 61
          |||| ||||||||||||| | |||||||||||| |||| | |||||||||||||||  ||
Sbjct: 1  ggtcagaccggccatgcaaatccggtcagaccgacggt-accaccggtcagaccggtcgt 59

                           
Query: 62 gcaatgccagtcagacc 78
          ||| |||| ||||||||
Sbjct: 60 gcattgccggtcagacc 76




>50880_osa-miRf11665-akr:pmrd
          Length = 79

 Score = 52.0 bits (26), Expect = 6e-08
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                            
Query: 1  cggtcggaccggccatgcagagccggtcagaccg 34
          ||||| ||||||||||||| ||||||||||||||
Sbjct: 34 cggtcagaccggccatgcaaagccggtcagaccg 1



 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 31/35 (88%)
 Strand = Plus / Minus

                                             
Query: 45 ccggtcagaccggctgtgcaatgccagtcagaccg 79
          ||||||||||||||  ||||| ||| |||||||||
Sbjct: 35 ccggtcagaccggccatgcaaagccggtcagaccg 1




>51288_osa-miRf12073-akr:pmrd
          Length = 110

 Score = 48.1 bits (24), Expect = 9e-07
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                              
Query: 44 accggtcagaccggctgtgcaatgccagtcagaccg 79
          ||||||||||||||| |||||| || ||||||||||
Sbjct: 15 accggtcagaccggccgtgcaaggctagtcagaccg 50




>51089_osa-miRf11874-akr:pmrd
          Length = 124

 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                          
Query: 46  cggtcagaccggctgtgcaatgccagtcaga 76
           ||||||||||||| | |||||||| ||||||
Sbjct: 91  cggtcagaccggccgcgcaatgccggtcaga 121