miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>50819_osa-miRf11604-akr:pmrd
Length = 101
Score = 200 bits (101), Expect = 1e-52
Identities = 101/101 (100%)
Strand = Plus / Plus
Query: 1 gtcatctactctctccgtcccaaaataaaccaacctcgtactaggaagtgtcatatacta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtcatctactctctccgtcccaaaataaaccaacctcgtactaggaagtgtcatatacta 60
Query: 61 gtacgggattgacttattttgggacggagggagtagataac 101
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtacgggattgacttattttgggacggagggagtagataac 101
Score = 54.0 bits (27), Expect = 2e-08
Identities = 78/95 (82%)
Strand = Plus / Minus
Query: 4 atctactctctccgtcccaaaataaaccaacctcgtactaggaagtgtcatatactagta 63
|||||||| |||||||||||||||| ||| | |||||||| | || || | ||||||
Sbjct: 98 atctactccctccgtcccaaaataagtcaatcccgtactagtatatgacacttcctagta 39
Query: 64 cgggattgacttattttgggacggagggagtagat 98
|| | ||| |||||||||||||||| ||||||||
Sbjct: 38 cgaggttggtttattttgggacggagagagtagat 4
>50818_osa-miRf11603-akr:pmrd
Length = 101
Score = 200 bits (101), Expect = 1e-52
Identities = 101/101 (100%)
Strand = Plus / Minus
Query: 1 gtcatctactctctccgtcccaaaataaaccaacctcgtactaggaagtgtcatatacta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 gtcatctactctctccgtcccaaaataaaccaacctcgtactaggaagtgtcatatacta 42
Query: 61 gtacgggattgacttattttgggacggagggagtagataac 101
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 41 gtacgggattgacttattttgggacggagggagtagataac 1
Score = 54.0 bits (27), Expect = 2e-08
Identities = 78/95 (82%)
Strand = Plus / Plus
Query: 4 atctactctctccgtcccaaaataaaccaacctcgtactaggaagtgtcatatactagta 63
|||||||| |||||||||||||||| ||| | |||||||| | || || | ||||||
Sbjct: 4 atctactccctccgtcccaaaataagtcaatcccgtactagtatatgacacttcctagta 63
Query: 64 cgggattgacttattttgggacggagggagtagat 98
|| | ||| |||||||||||||||| ||||||||
Sbjct: 64 cgaggttggtttattttgggacggagagagtagat 98
>49154_osa-miR1862c:pmrd
Length = 89
Score = 176 bits (89), Expect = 2e-45
Identities = 89/89 (100%)
Strand = Plus / Minus
Query: 6 ctactctctccgtcccaaaataaaccaacctcgtactaggaagtgtcatatactagtacg 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 ctactctctccgtcccaaaataaaccaacctcgtactaggaagtgtcatatactagtacg 30
Query: 66 ggattgacttattttgggacggagggagt 94
|||||||||||||||||||||||||||||
Sbjct: 29 ggattgacttattttgggacggagggagt 1
Score = 42.1 bits (21), Expect = 8e-05
Identities = 72/89 (80%)
Strand = Plus / Plus
Query: 8 actctctccgtcccaaaataaaccaacctcgtactaggaagtgtcatatactagtacggg 67
|||| |||||||||||||||| ||| | |||||||| | || || | |||||||| |
Sbjct: 1 actccctccgtcccaaaataagtcaatcccgtactagtatatgacacttcctagtacgag 60
Query: 68 attgacttattttgggacggagggagtag 96
||| |||||||||||||||| ||||||
Sbjct: 61 gttggtttattttgggacggagagagtag 89
>49152_osa-miR1862a:pmrd
Length = 88
Score = 71.9 bits (36), Expect = 8e-14
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 7 tactctctccgtcccaaaataaaccaacctcgtactagga 46
||||| ||||||||||||||||||||||||||||||||||
Sbjct: 87 tactccctccgtcccaaaataaaccaacctcgtactagga 48
Score = 54.0 bits (27), Expect = 2e-08
Identities = 74/89 (83%), Gaps = 3/89 (3%)
Strand = Plus / Plus
Query: 7 tactctctccgtcccaaaataaaccaacctcgtactaggaagtgtcatatactagtacgg 66
||||| ||||||||| |||||| | ||||||||| ||| ||||| || ||||||||
Sbjct: 2 tactccctccgtcccgaaataaccaaacctcgta---ggacatgtcacatcctagtacga 58
Query: 67 gattgacttattttgggacggagggagta 95
| ||| ||||||||||||||||||||||
Sbjct: 59 ggttggtttattttgggacggagggagta 87
>50234_osa-miRf11019-akr:pmrd
Length = 99
Score = 58.0 bits (29), Expect = 1e-09
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 7 tactctctccgtcccaaaataaaccaacctcgtactaggaagtgtcatatactagtacgg 66
||||| ||||||||||||| || ||||||||||||| || ||| || || |||||||
Sbjct: 6 tactccctccgtcccaaaaaaactcaacctcgtactacgacgtgacacatcctagtacta 65
Query: 67 gattgacttattttgggacggagggagta 95
| ||| ||| ||||||||| |||||||||
Sbjct: 66 ggttgcctttttttgggacagagggagta 94
Score = 58.0 bits (29), Expect = 1e-09
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 7 tactctctccgtcccaaaataaaccaacctcgtactaggaagtgtcatatactagtacgg 66
||||| ||| ||||||||| || |||||| ||||||||| |||||| | |||||||
Sbjct: 94 tactccctctgtcccaaaaaaaggcaacctagtactaggatgtgtcacgtcgtagtacga 35
Query: 67 gattgacttattttgggacggagggagta 95
| |||| || |||||||||||||||||||
Sbjct: 34 ggttgagtttttttgggacggagggagta 6
>49153_osa-miR1862b:pmrd
Length = 199
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 13 ctccgtcccaaaataaaccaacctcgtac 41
|||||||||||||||||||||||||||||
Sbjct: 158 ctccgtcccaaaataaaccaacctcgtac 130
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 74 ttattttgggacggagggag 93
||||||||||||||||||||
Sbjct: 143 ttattttgggacggagggag 162
>48648_hpr-miR1120:pmrd
Length = 85
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 72 acttattttgggacggagggagtag 96
|||||||||||||||||||||||||
Sbjct: 29 acttattttgggacggagggagtag 5
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 72 acttattttgggacggagggagta 95
||||||||||||||||||||||||
Sbjct: 57 acttattttgggacggagggagta 80
>49596_osa-miRf10381-akr:pmrd
Length = 147
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 72 acttattttgggacggagggagta 95
||||||||||||||||||||||||
Sbjct: 24 acttattttgggacggagggagta 1
>49658_osa-miRf10443-akr:pmrd
Length = 108
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 71 gacttattttgggacggagggagtaga 97
||||| |||||||||||||||||||||
Sbjct: 38 gactttttttgggacggagggagtaga 12
>49155_osa-miR1862d:pmrd
Length = 150
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 7 tactctctccgtcccaaaataaaccaacctcgtac 41
||||| |||||||||||||||||| ||||| ||||
Sbjct: 122 tactccctccgtcccaaaataaacaaacctagtac 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 74 ttattttgggacggagggagta 95
||||||||||||||||||||||
Sbjct: 101 ttattttgggacggagggagta 122
>50920_osa-miRf11705-akr:pmrd
Length = 134
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtag 96
||||||||||||||||||||||
Sbjct: 102 tattttgggacggagggagtag 123
>50485_osa-miRf11270-akr:pmrd
Length = 82
Score = 44.1 bits (22), Expect = 2e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 58 ctagtacgggattgacttattttgggacggagggagta 95
|||||| ||||| | ||| |||||||||||||||||||
Sbjct: 39 ctagtatgggatgggctttttttgggacggagggagta 76
>49958_osa-miRf10743-akr:pmrd
Length = 122
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtag 96
||||||||||||||||||||||
Sbjct: 90 tattttgggacggagggagtag 111
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 75 tattttgggacggagggagta 95
|||||||||||||||||||||
Sbjct: 32 tattttgggacggagggagta 12
>49957_osa-miRf10742-akr:pmrd
Length = 128
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 75 tattttgggacggagggagtag 96
||||||||||||||||||||||
Sbjct: 37 tattttgggacggagggagtag 16
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagta 95
|||||||||||||||||||||
Sbjct: 95 tattttgggacggagggagta 115
>49784_osa-miRf10569-akr:pmrd
Length = 132
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 74 ttattttgggacggagggagta 95
||||||||||||||||||||||
Sbjct: 32 ttattttgggacggagggagta 11
>49783_osa-miRf10568-akr:pmrd
Length = 132
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 74 ttattttgggacggagggagta 95
||||||||||||||||||||||
Sbjct: 32 ttattttgggacggagggagta 11
>49156_osa-miR1862e:pmrd
Length = 93
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 74 ttattttgggacggagggagta 95
||||||||||||||||||||||
Sbjct: 70 ttattttgggacggagggagta 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 7 tactctctccgtcccaaaataaac 30
||||| ||||||||||||||||||
Sbjct: 91 tactccctccgtcccaaaataaac 68
>49818_osa-miRf10603-akr:pmrd
Length = 97
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 7 tactctctccgtcccaaaata 27
|||||||||||||||||||||
Sbjct: 6 tactctctccgtcccaaaata 26
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagta 95
|||||||||||||||||||||
Sbjct: 72 tattttgggacggagggagta 92
>49537_osa-miRf10322-akr:pmrd
Length = 105
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 75 tattttgggacggagggagta 95
|||||||||||||||||||||
Sbjct: 30 tattttgggacggagggagta 10
>49536_osa-miRf10321-akr:pmrd
Length = 105
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 75 tattttgggacggagggagta 95
|||||||||||||||||||||
Sbjct: 30 tattttgggacggagggagta 10
>49517_osa-miRf10302-akr:pmrd
Length = 103
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 75 tattttgggacggagggagta 95
|||||||||||||||||||||
Sbjct: 27 tattttgggacggagggagta 7
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagta 95
|||||||||||||||||||||
Sbjct: 77 tattttgggacggagggagta 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 7 tactctctccgtcccaaaataaaccaacctcgtact 42
||||| ||||||||||||||| | |||||| |||||
Sbjct: 7 tactccctccgtcccaaaatatagcaaccttgtact 42
>49366_osa-miRf10151-akr:pmrd
Length = 82
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagta 95
|||||||||||||||||||||
Sbjct: 59 tattttgggacggagggagta 79
>49314_osa-miRf10099-akr:pmrd
Length = 144
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 75 tattttgggacggagggagta 95
|||||||||||||||||||||
Sbjct: 34 tattttgggacggagggagta 14
>54757_tmo-miR1122:pmrd
Length = 180
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 76 attttgggacggagggagta 95
||||||||||||||||||||
Sbjct: 45 attttgggacggagggagta 26
>54697_tae-miR1122:pmrd
Length = 295
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 76 attttgggacggagggagta 95
||||||||||||||||||||
Sbjct: 132 attttgggacggagggagta 151
>50587_osa-miRf11372-akr:pmrd
Length = 126
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 75 tattttgggacggagggagtagat 98
|||| |||||||||||||||||||
Sbjct: 101 tattatgggacggagggagtagat 124
>50434_osa-miRf11219-akr:pmrd
Length = 123
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 6 ctactctctccgtcccaaaa 25
||||||||||||||||||||
Sbjct: 118 ctactctctccgtcccaaaa 99
>50433_osa-miRf11218-akr:pmrd
Length = 123
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 6 ctactctctccgtcccaaaa 25
||||||||||||||||||||
Sbjct: 6 ctactctctccgtcccaaaa 25
>49444_osa-miRf10229-akr:pmrd
Length = 72
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 72 acttattttgggacggagggagta 95
|||||||||||||||||| |||||
Sbjct: 49 acttattttgggacggagtgagta 72
>49370_osa-miRf10155-akr:pmrd
Length = 69
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 ttttgggacggagggagtag 96
||||||||||||||||||||
Sbjct: 48 ttttgggacggagggagtag 67
>49057_osa-miR812j:pmrd
Length = 297
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 7 tactctctccgtcccaaaataaac 30
||||||||||||| ||||||||||
Sbjct: 264 tactctctccgtcacaaaataaac 241
>48647_hpi-miR1122:pmrd
Length = 180
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 76 attttgggacggagggagta 95
||||||||||||||||||||
Sbjct: 47 attttgggacggagggagta 28
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 76 attttgggacggagggagta 95
||||||||||||||||||||
Sbjct: 135 attttgggacggagggagta 154
