miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>51547_psi-miR159:pmrd
          Length = 193

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                             
Query: 61 ggttcagctgctgatttatgcattccgctgccctg 95
          |||||||||||||||| ||||||||  ||||||||
Sbjct: 40 ggttcagctgctgattcatgcattcgactgccctg 74



 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 136 ggtgtgcatgacgcaggagctgtattg 162
           ||||||||||||||||||| |||||||
Sbjct: 129 ggtgtgcatgacgcaggagatgtattg 155




>51562_pta-miR319:pmrd
          Length = 206

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 61  ggttcagctgctgatttatgcattc 85
           |||||||||||||||| ||||||||
Sbjct: 164 ggttcagctgctgattcatgcattc 140



 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 136 ggtgtgcatgacgcaggagctgta 159
           ||||||||||||||||||| ||||
Sbjct: 71  ggtgtgcatgacgcaggagatgta 48




>51553_pta-miR159a:pmrd
          Length = 210

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 61 ggttcagctgctgatttatgcattc 85
          |||||||||||||||| ||||||||
Sbjct: 47 ggttcagctgctgattcatgcattc 71



 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 136 ggtgtgcatgacgcaggagctgta 159
           ||||||||||||||||||| ||||
Sbjct: 140 ggtgtgcatgacgcaggagatgta 163




>54777_vvi-miR159c:pmrd
          Length = 190

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 175 ccttttttggtttgaagggagctctaca 202
           |||| ||||| |||||||||||||||||
Sbjct: 155 ccttgtttggattgaagggagctctaca 182




>54540_sly-miR159:pmrd
          Length = 177

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 177 ttttttggtttgaagggagctcta 200
           |||||||| |||||||||||||||
Sbjct: 154 ttttttggattgaagggagctcta 177




>51603_ptc-miR159b:pmrd
          Length = 187

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 177 ttttttggtttgaagggagctcta 200
           |||||||| |||||||||||||||
Sbjct: 155 ttttttggattgaagggagctcta 178




>48539_gma-miR159a:pmrd
          Length = 214

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 175 ccttttttggtttgaagggagctctaca 202
           |||| ||||| |||||||||||||||||
Sbjct: 170 ccttctttggattgaagggagctctaca 197