miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>51285_osa-miRf12070-akr:pmrd
Length = 74
Score = 147 bits (74), Expect = 1e-36
Identities = 74/74 (100%)
Strand = Plus / Minus
Query: 1 atctttacttccggttggtactaccaaccgagtcaaaattgtaccagttggtagtatcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 atctttacttccggttggtactaccaaccgagtcaaaattgtaccagttggtagtatcaa 15
Query: 61 ccgggagtaaagat 74
||||||||||||||
Sbjct: 14 ccgggagtaaagat 1
>50221_osa-miRf11006-akr:pmrd
Length = 85
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 1 atctttacttccggttggtactaccaaccg 30
||||||||||||||||||||||||||||||
Sbjct: 85 atctttacttccggttggtactaccaaccg 56
>50335_osa-miRf11120-akr:pmrd
Length = 131
Score = 54.0 bits (27), Expect = 1e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 44 ccagttggtagtatcaaccgggagtaaagat 74
||||||||||||| |||||||||||||||||
Sbjct: 100 ccagttggtagtaacaaccgggagtaaagat 130
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 47 gttggtagtatcaaccgggagtaaagat 74
||||||||||||||| |||| |||||||
Sbjct: 29 gttggtagtatcaactgggactaaagat 2
>50509_osa-miRf11294-akr:pmrd
Length = 87
Score = 52.0 bits (26), Expect = 5e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1 atctttacttccggttggtactaccaaccg 30
||||||||| ||||||||||||||||||||
Sbjct: 48 atctttactcccggttggtactaccaaccg 77
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 47 gttggtagtatcaaccgggagtaaagat 74
|||||||||| |||||||||||||||||
Sbjct: 75 gttggtagtaccaaccgggagtaaagat 48
>51257_osa-miRf12042-akr:pmrd
Length = 87
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 47 gttggtagtatcaaccgggagtaaagat 74
|||||||||||||||||||| |||||||
Sbjct: 29 gttggtagtatcaaccgggattaaagat 2
Score = 38.2 bits (19), Expect = 8e-04
Identities = 28/31 (90%)
Strand = Plus / Minus
Query: 1 atctttacttccggttggtactaccaaccga 31
||||||||| ||||| ||||||||||||||
Sbjct: 86 atctttactctcggttagtactaccaaccga 56
>50304_osa-miRf11089-akr:pmrd
Length = 85
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 47 gttggtagtatcaaccgggagtaaagat 74
|||||||||| |||||||||||||||||
Sbjct: 29 gttggtagtaacaaccgggagtaaagat 2
Score = 42.1 bits (21), Expect = 5e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 atctttacttccggttggtactaccaacc 29
||||||||| ||||||| |||||||||||
Sbjct: 2 atctttactcccggttgttactaccaacc 30
>49633_osa-miRf10418-akr:pmrd
Length = 92
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 47 gttggtagtatcaaccgggagtaaagat 74
|||||||||||||||||||| |||||||
Sbjct: 90 gttggtagtatcaaccgggactaaagat 63
>49511_osa-miRf10296-akr:pmrd
Length = 86
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 47 gttggtagtatcaaccgggagtaaagat 74
|||||||||||||||||||| |||||||
Sbjct: 15 gttggtagtatcaaccgggactaaagat 42
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 47 gttggtagtatcaaccgggagtaaagat 74
|||||||||| |||||||||||||||||
Sbjct: 58 gttggtagtaacaaccgggagtaaagat 85
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 1 atctttacttccggttggtactaccaaccg 30
||||||||| ||||||| ||||||||||||
Sbjct: 85 atctttactcccggttgttactaccaaccg 56
>49249_osa-miRf10034-akr:pmrd
Length = 83
Score = 48.1 bits (24), Expect = 8e-07
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 39 ttgtaccagttggtagtatcaaccgggagtaaagat 74
||||||| ||||||| |||||||||||||||||||
Sbjct: 4 ttgtaccggttggtaccatcaaccgggagtaaagat 39
>50763_osa-miRf11548-akr:pmrd
Length = 80
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 47 gttggtagtatcaaccgggagtaaaga 73
|||||||||| ||||||||||||||||
Sbjct: 54 gttggtagtaacaaccgggagtaaaga 80
Score = 42.1 bits (21), Expect = 5e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 2 tctttacttccggttggtactaccaaccg 30
|||||||| ||||||| ||||||||||||
Sbjct: 80 tctttactcccggttgttactaccaaccg 52
>49932_osa-miRf10717-akr:pmrd
Length = 112
Score = 46.1 bits (23), Expect = 3e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 44 ccagttggtagtatcaaccgggagtaaagat 74
||||||||||||| ||||||||| |||||||
Sbjct: 100 ccagttggtagtaccaaccgggactaaagat 70
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 atctttacttccggttggtactaccaac 28
||||||| | ||||||||||||||||||
Sbjct: 70 atctttagtcccggttggtactaccaac 97
>49931_osa-miRf10716-akr:pmrd
Length = 112
Score = 46.1 bits (23), Expect = 3e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 44 ccagttggtagtatcaaccgggagtaaagat 74
||||||||||||| ||||||||| |||||||
Sbjct: 100 ccagttggtagtaccaaccgggactaaagat 70
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 atctttacttccggttggtactaccaac 28
||||||| | ||||||||||||||||||
Sbjct: 70 atctttagtcccggttggtactaccaac 97
>51186_osa-miRf11971-akr:pmrd
Length = 148
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 49 tggtagtatcaaccgggagtaaagat 74
||||| ||||||||||||||||||||
Sbjct: 48 tggtactatcaaccgggagtaaagat 73
>50765_osa-miRf11550-akr:pmrd
Length = 117
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 ccggttggtactaccaaccgag 32
||||||||||||||||||||||
Sbjct: 12 ccggttggtactaccaaccgag 33
>49921_osa-miRf10706-akr:pmrd
Length = 93
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 1 atctttacttccggttggtactaccaaccg 30
||||||| |||||||||||| |||||||||
Sbjct: 43 atctttagttccggttggtattaccaaccg 14
>51185_osa-miRf11970-akr:pmrd
Length = 127
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 3 ctttacttccggttggtactaccaaccg 30
||||||| ||||||||||||| ||||||
Sbjct: 1 ctttactcccggttggtactatcaaccg 28
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 47 gttggtagtatcaaccgggagtaaagat 74
||||||| |||||||||||| |||||||
Sbjct: 12 gttggtactatcaaccgggactaaagat 39
>51069_osa-miRf11854-akr:pmrd
Length = 127
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1 atctttacttccggttggtactaccaaccgag 32
||||||| | |||||||||| |||||||||||
Sbjct: 90 atctttagtcccggttggtattaccaaccgag 121
>51049_osa-miRf11834-akr:pmrd
Length = 126
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 47 gttggtagtatcaaccgggagtaaagat 74
||||||||||||||||| || |||||||
Sbjct: 16 gttggtagtatcaaccgagactaaagat 43
>50933_osa-miRf11718-akr:pmrd
Length = 188
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 47 gttggtagtatcaaccgggagtaaagat 74
||||||| || |||||||||||||||||
Sbjct: 11 gttggtaataccaaccgggagtaaagat 38
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 47 gttggtagtatcaaccgggagtaaagat 74
|||||||||||||| ||||| |||||||
Sbjct: 72 gttggtagtatcaatcgggattaaagat 99
>50921_osa-miRf11706-akr:pmrd
Length = 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 47 gttggtagtatcaaccgggagtaaagat 74
||||||| |||||||||||| |||||||
Sbjct: 29 gttggtattatcaaccgggactaaagat 2
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 47 gttggtagtatcaaccgggagtaaagat 74
||||||| |||||||||||| |||||||
Sbjct: 59 gttggtactatcaaccgggaataaagat 86
>50899_osa-miRf11684-akr:pmrd
Length = 127
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 47 gttggtagtatcaaccgggagtaaagat 74
||||||| |||||||||||| |||||||
Sbjct: 117 gttggtattatcaaccgggactaaagat 90
>50898_osa-miRf11683-akr:pmrd
Length = 137
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 47 gttggtagtatcaaccgggagtaaagat 74
||||||| |||||||||||| |||||||
Sbjct: 122 gttggtattatcaaccgggactaaagat 95
>50590_osa-miRf11375-akr:pmrd
Length = 83
Score = 40.1 bits (20), Expect = 2e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 39 ttgtaccagttggtagtatcaaccgggagtaaagat 74
||||||| ||||||| ||||||||||| |||||||
Sbjct: 80 ttgtaccggttggtaacatcaaccgggactaaagat 45
>50495_osa-miRf11280-akr:pmrd
Length = 83
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 47 gttggtagtatcaaccgggagtaaagat 74
||||||| || |||||||||||||||||
Sbjct: 73 gttggtattaccaaccgggagtaaagat 46
>49905_osa-miRf10690-akr:pmrd
Length = 104
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 5 ttacttccggttggtactaccaaccgag 32
||||| |||||||||| |||||||||||
Sbjct: 104 ttactcccggttggtaataccaaccgag 77
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 56 atcaaccgggagtaaagat 74
|||||||||||||||||||
Sbjct: 19 atcaaccgggagtaaagat 37
>49760_osa-miRf10545-akr:pmrd
Length = 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 47 gttggtagtatcaaccgggagtaaagat 74
||||||||||| |||||||| |||||||
Sbjct: 29 gttggtagtataaaccgggactaaagat 2
>51317_osa-miRf12102-akr:pmrd
Length = 87
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 12 cggttggtactaccaaccg 30
|||||||||||||||||||
Sbjct: 77 cggttggtactaccaaccg 59
>51119_osa-miRf11904-akr:pmrd
Length = 88
Score = 38.2 bits (19), Expect = 8e-04
Identities = 28/31 (90%)
Strand = Plus / Minus
Query: 1 atctttacttccggttggtactaccaaccga 31
||||||| |||||||||||| |||||||||
Sbjct: 43 atctttagttccggttggtaacaccaaccga 13
>50808_osa-miRf11593-akr:pmrd
Length = 119
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 atctttacttccggttggt 19
|||||||||||||||||||
Sbjct: 86 atctttacttccggttggt 104
>50214_osa-miRf10999-akr:pmrd
Length = 130
Score = 38.2 bits (19), Expect = 8e-04
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 4 tttacttccggttggtactaccaaccg 30
|||| |||||||||||| |||||||||
Sbjct: 130 tttaattccggttggtattaccaaccg 104
>49915_osa-miRf10700-akr:pmrd
Length = 85
Score = 38.2 bits (19), Expect = 8e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 48 ttggtagtatcaaccgggagtaaagat 74
|||||| |||||||||||| |||||||
Sbjct: 13 ttggtattatcaaccgggattaaagat 39
>49824_osa-miRf10609-akr:pmrd
Length = 123
Score = 38.2 bits (19), Expect = 8e-04
Identities = 28/31 (90%)
Strand = Plus / Minus
Query: 44 ccagttggtagtatcaaccgggagtaaagat 74
||||||||| |||||||||||| |||||||
Sbjct: 117 ccagttggtgttatcaaccgggactaaagat 87
>49823_osa-miRf10608-akr:pmrd
Length = 125
Score = 38.2 bits (19), Expect = 8e-04
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 44 ccagttggtagtatcaaccgggagtaaagat 74
||||||||| |||||||||||| |||||||
Sbjct: 8 ccagttggtgttatcaaccgggactaaagat 38
>49654_osa-miRf10439-akr:pmrd
Length = 84
Score = 38.2 bits (19), Expect = 8e-04
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 47 gttggtagtatcaaccgggagtaaaga 73
|||||| ||||||||||||| ||||||
Sbjct: 27 gttggtggtatcaaccgggactaaaga 1
>49353_osa-miRf10138-akr:pmrd
Length = 125
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 56 atcaaccgggagtaaagat 74
|||||||||||||||||||
Sbjct: 58 atcaaccgggagtaaagat 40
>49254_osa-miRf10039-akr:pmrd
Length = 109
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 53 agtatcaaccgggagtaaa 71
|||||||||||||||||||
Sbjct: 58 agtatcaaccgggagtaaa 40
