miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>51284_osa-miRf12069-akr:pmrd
Length = 74
Score = 147 bits (74), Expect = 1e-36
Identities = 74/74 (100%)
Strand = Plus / Minus
Query: 1 atctttactcccggttgatactaccaactggtacaattttgactcggttggtagtaccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 atctttactcccggttgatactaccaactggtacaattttgactcggttggtagtaccaa 15
Query: 61 ccggaagtaaagat 74
||||||||||||||
Sbjct: 14 ccggaagtaaagat 1
>50221_osa-miRf11006-akr:pmrd
Length = 85
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 45 cggttggtagtaccaaccggaagtaaagat 74
||||||||||||||||||||||||||||||
Sbjct: 56 cggttggtagtaccaaccggaagtaaagat 85
>50335_osa-miRf11120-akr:pmrd
Length = 131
Score = 54.0 bits (27), Expect = 1e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 1 atctttactcccggttgatactaccaactgg 31
||||||||||||||||| |||||||||||||
Sbjct: 130 atctttactcccggttgttactaccaactgg 100
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 atctttactcccggttgatactaccaac 28
||||||| |||| |||||||||||||||
Sbjct: 2 atctttagtcccagttgatactaccaac 29
>50509_osa-miRf11294-akr:pmrd
Length = 87
Score = 52.0 bits (26), Expect = 5e-08
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 45 cggttggtagtaccaaccggaagtaaagat 74
|||||||||||||||||||| |||||||||
Sbjct: 77 cggttggtagtaccaaccgggagtaaagat 48
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 atctttactcccggttgatactaccaac 28
||||||||||||||||| ||||||||||
Sbjct: 48 atctttactcccggttggtactaccaac 75
>51257_osa-miRf12042-akr:pmrd
Length = 87
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 atctttactcccggttgatactaccaac 28
||||||| ||||||||||||||||||||
Sbjct: 2 atctttaatcccggttgatactaccaac 29
Score = 38.2 bits (19), Expect = 8e-04
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 44 tcggttggtagtaccaaccggaagtaaagat 74
|||||||||||||| ||||| |||||||||
Sbjct: 56 tcggttggtagtactaaccgagagtaaagat 86
>50304_osa-miRf11089-akr:pmrd
Length = 85
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 atctttactcccggttgatactaccaac 28
||||||||||||||||| ||||||||||
Sbjct: 2 atctttactcccggttgttactaccaac 29
Score = 42.1 bits (21), Expect = 5e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 46 ggttggtagtaccaaccggaagtaaagat 74
||||||||||| ||||||| |||||||||
Sbjct: 30 ggttggtagtaacaaccgggagtaaagat 2
>49633_osa-miRf10418-akr:pmrd
Length = 92
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 atctttactcccggttgatactaccaac 28
||||||| ||||||||||||||||||||
Sbjct: 63 atctttagtcccggttgatactaccaac 90
>49511_osa-miRf10296-akr:pmrd
Length = 86
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 1 atctttactcccggttgatactaccaac 28
||||||| ||||||||||||||||||||
Sbjct: 42 atctttagtcccggttgatactaccaac 15
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 1 atctttactcccggttgatactaccaac 28
||||||||||||||||| ||||||||||
Sbjct: 85 atctttactcccggttgttactaccaac 58
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 45 cggttggtagtaccaaccggaagtaaagat 74
|||||||||||| ||||||| |||||||||
Sbjct: 56 cggttggtagtaacaaccgggagtaaagat 85
>49249_osa-miRf10034-akr:pmrd
Length = 83
Score = 48.1 bits (24), Expect = 8e-07
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 1 atctttactcccggttgatactaccaactggtacaa 36
||||||||||||||||||| ||||||| |||||||
Sbjct: 39 atctttactcccggttgatggtaccaaccggtacaa 4
>50763_osa-miRf11548-akr:pmrd
Length = 80
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 2 tctttactcccggttgatactaccaac 28
|||||||||||||||| ||||||||||
Sbjct: 80 tctttactcccggttgttactaccaac 54
Score = 42.1 bits (21), Expect = 5e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 45 cggttggtagtaccaaccggaagtaaaga 73
|||||||||||| ||||||| ||||||||
Sbjct: 52 cggttggtagtaacaaccgggagtaaaga 80
>49932_osa-miRf10717-akr:pmrd
Length = 112
Score = 46.1 bits (23), Expect = 3e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1 atctttactcccggttgatactaccaactgg 31
||||||| ||||||||| |||||||||||||
Sbjct: 70 atctttagtcccggttggtactaccaactgg 100
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 47 gttggtagtaccaaccggaagtaaagat 74
|||||||||||||||||| | |||||||
Sbjct: 97 gttggtagtaccaaccgggactaaagat 70
>49931_osa-miRf10716-akr:pmrd
Length = 112
Score = 46.1 bits (23), Expect = 3e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1 atctttactcccggttgatactaccaactgg 31
||||||| ||||||||| |||||||||||||
Sbjct: 70 atctttagtcccggttggtactaccaactgg 100
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 47 gttggtagtaccaaccggaagtaaagat 74
|||||||||||||||||| | |||||||
Sbjct: 97 gttggtagtaccaaccgggactaaagat 70
>51186_osa-miRf11971-akr:pmrd
Length = 148
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1 atctttactcccggttgatactacca 26
|||||||||||||||||||| |||||
Sbjct: 73 atctttactcccggttgatagtacca 48
>50765_osa-miRf11550-akr:pmrd
Length = 117
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 43 ctcggttggtagtaccaaccgg 64
||||||||||||||||||||||
Sbjct: 33 ctcggttggtagtaccaaccgg 12
>49921_osa-miRf10706-akr:pmrd
Length = 93
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 45 cggttggtagtaccaaccggaagtaaagat 74
||||||||| |||||||||||| |||||||
Sbjct: 14 cggttggtaataccaaccggaactaaagat 43
>51185_osa-miRf11970-akr:pmrd
Length = 127
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 45 cggttggtagtaccaaccggaagtaaag 72
|||||| ||||||||||||| |||||||
Sbjct: 28 cggttgatagtaccaaccgggagtaaag 1
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 1 atctttactcccggttgatactaccaac 28
||||||| |||||||||||| |||||||
Sbjct: 39 atctttagtcccggttgatagtaccaac 12
>51069_osa-miRf11854-akr:pmrd
Length = 127
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 43 ctcggttggtagtaccaaccggaagtaaagat 74
||||||||||| |||||||||| | |||||||
Sbjct: 121 ctcggttggtaataccaaccgggactaaagat 90
>51049_osa-miRf11834-akr:pmrd
Length = 126
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 1 atctttactcccggttgatactaccaac 28
||||||| || |||||||||||||||||
Sbjct: 43 atctttagtctcggttgatactaccaac 16
>50933_osa-miRf11718-akr:pmrd
Length = 188
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 1 atctttactcccggttgatactaccaac 28
||||||||||||||||| || |||||||
Sbjct: 38 atctttactcccggttggtattaccaac 11
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 1 atctttactcccggttgatactaccaac 28
||||||| ||||| ||||||||||||||
Sbjct: 99 atctttaatcccgattgatactaccaac 72
>50921_osa-miRf11706-akr:pmrd
Length = 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 atctttactcccggttgatactaccaac 28
||||||| |||||||||||| |||||||
Sbjct: 2 atctttagtcccggttgataataccaac 29
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 1 atctttactcccggttgatactaccaac 28
||||||| |||||||||||| |||||||
Sbjct: 86 atctttattcccggttgatagtaccaac 59
>50899_osa-miRf11684-akr:pmrd
Length = 127
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 atctttactcccggttgatactaccaac 28
||||||| |||||||||||| |||||||
Sbjct: 90 atctttagtcccggttgataataccaac 117
>50898_osa-miRf11683-akr:pmrd
Length = 137
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 atctttactcccggttgatactaccaac 28
||||||| |||||||||||| |||||||
Sbjct: 95 atctttagtcccggttgataataccaac 122
>50590_osa-miRf11375-akr:pmrd
Length = 83
Score = 40.1 bits (20), Expect = 2e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 1 atctttactcccggttgatactaccaactggtacaa 36
||||||| ||||||||||| ||||||| |||||||
Sbjct: 45 atctttagtcccggttgatgttaccaaccggtacaa 80
>50495_osa-miRf11280-akr:pmrd
Length = 83
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 atctttactcccggttgatactaccaac 28
||||||||||||||||| || |||||||
Sbjct: 46 atctttactcccggttggtaataccaac 73
>49905_osa-miRf10690-akr:pmrd
Length = 104
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 43 ctcggttggtagtaccaaccggaagtaa 70
||||||||||| |||||||||| |||||
Sbjct: 77 ctcggttggtattaccaaccgggagtaa 104
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1 atctttactcccggttgat 19
|||||||||||||||||||
Sbjct: 37 atctttactcccggttgat 19
>49760_osa-miRf10545-akr:pmrd
Length = 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 atctttactcccggttgatactaccaac 28
||||||| |||||||| |||||||||||
Sbjct: 2 atctttagtcccggtttatactaccaac 29
>51317_osa-miRf12102-akr:pmrd
Length = 87
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 45 cggttggtagtaccaaccg 63
|||||||||||||||||||
Sbjct: 59 cggttggtagtaccaaccg 77
>51119_osa-miRf11904-akr:pmrd
Length = 88
Score = 38.2 bits (19), Expect = 8e-04
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 44 tcggttggtagtaccaaccggaagtaaagat 74
||||||||| |||||||||||| |||||||
Sbjct: 13 tcggttggtgttaccaaccggaactaaagat 43
>50808_osa-miRf11593-akr:pmrd
Length = 119
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 56 accaaccggaagtaaagat 74
|||||||||||||||||||
Sbjct: 104 accaaccggaagtaaagat 86
>50214_osa-miRf10999-akr:pmrd
Length = 130
Score = 38.2 bits (19), Expect = 8e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 45 cggttggtagtaccaaccggaagtaaa 71
||||||||| |||||||||||| ||||
Sbjct: 104 cggttggtaataccaaccggaattaaa 130
>49915_osa-miRf10700-akr:pmrd
Length = 85
Score = 38.2 bits (19), Expect = 8e-04
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 1 atctttactcccggttgatactaccaa 27
||||||| |||||||||||| ||||||
Sbjct: 39 atctttaatcccggttgataataccaa 13
>49824_osa-miRf10609-akr:pmrd
Length = 123
Score = 38.2 bits (19), Expect = 8e-04
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 1 atctttactcccggttgatactaccaactgg 31
||||||| |||||||||||| |||||||||
Sbjct: 87 atctttagtcccggttgataacaccaactgg 117
>49823_osa-miRf10608-akr:pmrd
Length = 125
Score = 38.2 bits (19), Expect = 8e-04
Identities = 28/31 (90%)
Strand = Plus / Minus
Query: 1 atctttactcccggttgatactaccaactgg 31
||||||| |||||||||||| |||||||||
Sbjct: 38 atctttagtcccggttgataacaccaactgg 8
>49654_osa-miRf10439-akr:pmrd
Length = 84
Score = 38.2 bits (19), Expect = 8e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 2 tctttactcccggttgatactaccaac 28
|||||| ||||||||||||| ||||||
Sbjct: 1 tctttagtcccggttgataccaccaac 27
>49353_osa-miRf10138-akr:pmrd
Length = 125
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 atctttactcccggttgat 19
|||||||||||||||||||
Sbjct: 40 atctttactcccggttgat 58
>49254_osa-miRf10039-akr:pmrd
Length = 109
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 4 tttactcccggttgatact 22
|||||||||||||||||||
Sbjct: 40 tttactcccggttgatact 58
